FFCP PHASE1:Mm9::chr16:75016670..75016679,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=199|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr16:75016670..75016679,-|id=chr16:75016670..75016679,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002021!3.69e-18!10;UBERON:0000411!3.69e-18!10;UBERON:0001950!3.69e-18!10;UBERON:0003056!5.33e-15!49;UBERON:0000033!1.65e-14!63;UBERON:0002619!5.86e-12!17;UBERON:0000956!5.18e-11!21;UBERON:0001869!5.18e-11!21;UBERON:0000203!5.18e-11!21;UBERON:0002346!1.04e-10!71;UBERON:0003075!1.04e-10!71;UBERON:0007284!1.04e-10!71;UBERON:0000955!5.22e-10!50;UBERON:0006238!5.22e-10!50;UBERON:0000153!1.27e-09!94;UBERON:0002020!1.47e-09!34;UBERON:0003080!5.06e-09!40;UBERON:0007811!5.26e-09!86;UBERON:0002616!5.49e-09!49;UBERON:0002791!9.57e-09!29;UBERON:0003528!9.57e-09!29;UBERON:0001893!9.57e-09!29;UBERON:0000970!2.04e-08!9;UBERON:0000019!2.04e-08!9;UBERON:0000047!2.04e-08!9;UBERON:0004088!2.04e-08!9;UBERON:0002104!2.04e-08!9;UBERON:0001456!2.04e-08!9;UBERON:0003072!2.04e-08!9;UBERON:0003071!2.04e-08!9;UBERON:0004128!2.04e-08!9;UBERON:0004121!3.39e-08!102;UBERON:0000924!3.39e-08!102;UBERON:0006601!3.39e-08!102;UBERON:0002780!4.81e-08!39;UBERON:0001890!4.81e-08!39;UBERON:0006240!4.81e-08!39;UBERON:0001049!5.04e-08!52;UBERON:0005068!5.04e-08!52;UBERON:0006241!5.04e-08!52;UBERON:0007135!5.04e-08!52;UBERON:0001017!4.76e-07!73;UBERON:0005743!4.76e-07!73;UBERON:0000073!9.76e-07!75;UBERON:0001016!9.76e-07!75;UBERON:0001444!9.87e-07!11|ontology_enrichment_uberon_v019_2=UBERON:0002021,4.25e-53,10;UBERON:0000411,4.25e-53,10;UBERON:0001950,4.25e-53,10;UBERON:0002619,2.37e-31,17;UBERON:0000956,2.03e-25,21;UBERON:0001869,2.03e-25,21;UBERON:0000203,2.03e-25,21;UBERON:0003528,1.92e-18,29;UBERON:0002791,1.92e-18,29;UBERON:0001893,1.92e-18,29;UBERON:0002020,9.62e-16,34;UBERON:0003056,2.84e-14,49;UBERON:0002780,9.91e-14,39;UBERON:0001890,9.91e-14,39;UBERON:0006240,9.91e-14,39;UBERON:0003080,2.18e-13,40;UBERON:0002616,1.22e-11,46;UBERON:0000955,2.15e-11,47;UBERON:0006238,2.15e-11,47;UBERON:0002346,6.42e-11,64;UBERON:0003075,6.42e-11,64;UBERON:0007284,6.42e-11,64;UBERON:0001049,2.71e-10,52;UBERON:0005068,2.71e-10,52;UBERON:0006241,2.71e-10,52;UBERON:0007135,2.71e-10,52;UBERON:0000073,6.54e-10,54;UBERON:0010371,1.46e-09,73;UBERON:0010314,1.48e-07,92;UBERON:0004121,2.60e-07,95;UBERON:0000924,2.60e-07,95;UBERON:0006601,2.60e-07,95;UBERON:0001017,2.65e-07,73;UBERON:0001016,4.19e-07,75|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255374676170375,0.768032666281217,0,0,0,0,0,0,0,0.142371680799103,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299581278809645,0.457500602818626,0,0.173824320192276,0.767146371990992,0.20778804455956,0.324482526135515,0,0,0,0,0,0,0.360124259610698,0.90422890701429,2.04109497453984,0.896796041993948,0.562210347358373,0.258703370739016,0,0,0,0,0.556094498451196,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0.327726629431476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.642642632843614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,0.920650473014354,1.14579102687879,0.859265911718438,1.37016503954128,4.5323633843382,2.02506750069542,2.70192721934532,0,1.03552062350364,0,0,0,0.243106717068294,0,0,0.44449345560323,0.206035057238894,0,0,0,0.188626341386076,0.0936415074698824,0.128050304809739,0.114870937911227,0,0,0,0,0,0.342869252385415,0.177475806159338,0,0.145346416632329,0.0941093804153306,0.25384382367503,0,0,0,0,0,0.197008964751127,0,0,0,0,0,0,0,0,0|short_description=p@chr16:75016670..75016679,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=199 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr16:75016670..75016679,- | |||
|description=CAGE_peak_at_chr16:75016670..75016679,- | |||
|id=chr16:75016670..75016679,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002021!3.69e-18!10;UBERON:0000411!3.69e-18!10;UBERON:0001950!3.69e-18!10;UBERON:0003056!5.33e-15!49;UBERON:0000033!1.65e-14!63;UBERON:0002619!5.86e-12!17;UBERON:0000956!5.18e-11!21;UBERON:0001869!5.18e-11!21;UBERON:0000203!5.18e-11!21;UBERON:0002346!1.04e-10!71;UBERON:0003075!1.04e-10!71;UBERON:0007284!1.04e-10!71;UBERON:0000955!5.22e-10!50;UBERON:0006238!5.22e-10!50;UBERON:0000153!1.27e-09!94;UBERON:0002020!1.47e-09!34;UBERON:0003080!5.06e-09!40;UBERON:0007811!5.26e-09!86;UBERON:0002616!5.49e-09!49;UBERON:0002791!9.57e-09!29;UBERON:0003528!9.57e-09!29;UBERON:0001893!9.57e-09!29;UBERON:0000970!2.04e-08!9;UBERON:0000019!2.04e-08!9;UBERON:0000047!2.04e-08!9;UBERON:0004088!2.04e-08!9;UBERON:0002104!2.04e-08!9;UBERON:0001456!2.04e-08!9;UBERON:0003072!2.04e-08!9;UBERON:0003071!2.04e-08!9;UBERON:0004128!2.04e-08!9;UBERON:0004121!3.39e-08!102;UBERON:0000924!3.39e-08!102;UBERON:0006601!3.39e-08!102;UBERON:0002780!4.81e-08!39;UBERON:0001890!4.81e-08!39;UBERON:0006240!4.81e-08!39;UBERON:0001049!5.04e-08!52;UBERON:0005068!5.04e-08!52;UBERON:0006241!5.04e-08!52;UBERON:0007135!5.04e-08!52;UBERON:0001017!4.76e-07!73;UBERON:0005743!4.76e-07!73;UBERON:0000073!9.76e-07!75;UBERON:0001016!9.76e-07!75;UBERON:0001444!9.87e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,4.25e-53,10;UBERON:0000411,4.25e-53,10;UBERON:0001950,4.25e-53,10;UBERON:0002619,2.37e-31,17;UBERON:0000956,2.03e-25,21;UBERON:0001869,2.03e-25,21;UBERON:0000203,2.03e-25,21;UBERON:0003528,1.92e-18,29;UBERON:0002791,1.92e-18,29;UBERON:0001893,1.92e-18,29;UBERON:0002020,9.62e-16,34;UBERON:0003056,2.84e-14,49;UBERON:0002780,9.91e-14,39;UBERON:0001890,9.91e-14,39;UBERON:0006240,9.91e-14,39;UBERON:0003080,2.18e-13,40;UBERON:0002616,1.22e-11,46;UBERON:0000955,2.15e-11,47;UBERON:0006238,2.15e-11,47;UBERON:0002346,6.42e-11,64;UBERON:0003075,6.42e-11,64;UBERON:0007284,6.42e-11,64;UBERON:0001049,2.71e-10,52;UBERON:0005068,2.71e-10,52;UBERON:0006241,2.71e-10,52;UBERON:0007135,2.71e-10,52;UBERON:0000073,6.54e-10,54;UBERON:0010371,1.46e-09,73;UBERON:0010314,1.48e-07,92;UBERON:0004121,2.60e-07,95;UBERON:0000924,2.60e-07,95;UBERON:0006601,2.60e-07,95;UBERON:0001017,2.65e-07,73;UBERON:0001016,4.19e-07,75 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255374676170375,0.768032666281217,0,0,0,0,0,0,0,0.142371680799103,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299581278809645,0.457500602818626,0,0.173824320192276,0.767146371990992,0.20778804455956,0.324482526135515,0,0,0,0,0,0,0.360124259610698,0.90422890701429,2.04109497453984,0.896796041993948,0.562210347358373,0.258703370739016,0,0,0,0,0.556094498451196,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0.327726629431476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.642642632843614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,0.920650473014354,1.14579102687879,0.859265911718438,1.37016503954128,4.5323633843382,2.02506750069542,2.70192721934532,0,1.03552062350364,0,0,0,0.243106717068294,0,0,0.44449345560323,0.206035057238894,0,0,0,0.188626341386076,0.0936415074698824,0.128050304809739,0.114870937911227,0,0,0,0,0,0.342869252385415,0.177475806159338,0,0.145346416632329,0.0941093804153306,0.25384382367503,0,0,0,0,0,0.197008964751127,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr16:75016670..75016679,- | |||
}} |
Latest revision as of 01:44, 4 August 2015
Short description: | p@chr16:75016670..75016679, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:75016670..75016679, - |
Coexpression cluster: | MCL_coexpression_mm9:199 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 4.25e-53 | 10 |
visual cortex | 4.25e-53 | 10 |
neocortex | 4.25e-53 | 10 |
regional part of cerebral cortex | 2.37e-31 | 17 |
cerebral cortex | 2.03e-25 | 21 |
cerebral hemisphere | 2.03e-25 | 21 |
pallium | 2.03e-25 | 21 |
brain grey matter | 1.92e-18 | 29 |
regional part of telencephalon | 1.92e-18 | 29 |
telencephalon | 1.92e-18 | 29 |
gray matter | 9.62e-16 | 34 |
pre-chordal neural plate | 2.84e-14 | 49 |
regional part of forebrain | 9.91e-14 | 39 |
forebrain | 9.91e-14 | 39 |
future forebrain | 9.91e-14 | 39 |
anterior neural tube | 2.18e-13 | 40 |
regional part of brain | 1.22e-11 | 46 |
brain | 2.15e-11 | 47 |
future brain | 2.15e-11 | 47 |
neurectoderm | 6.42e-11 | 64 |
neural plate | 6.42e-11 | 64 |
presumptive neural plate | 6.42e-11 | 64 |
neural tube | 2.71e-10 | 52 |
neural rod | 2.71e-10 | 52 |
future spinal cord | 2.71e-10 | 52 |
neural keel | 2.71e-10 | 52 |
regional part of nervous system | 6.54e-10 | 54 |
ecto-epithelium | 1.46e-09 | 73 |
structure with developmental contribution from neural crest | 1.48e-07 | 92 |
ectoderm-derived structure | 2.60e-07 | 95 |
ectoderm | 2.60e-07 | 95 |
presumptive ectoderm | 2.60e-07 | 95 |
central nervous system | 2.65e-07 | 73 |
nervous system | 4.19e-07 | 75 |