FFCP PHASE1:Mm9::chr2:131845204..131845212,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=36 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:131845204..131845212,- | |||
|description=CAGE_peak_at_chr2:131845204..131845212,- | |description=CAGE_peak_at_chr2:131845204..131845212,- | ||
|id=chr2:131845204..131845212,- | |id=chr2:131845204..131845212,- | ||
|ontology_enrichment_celltype=CL:0000838!4.85e-12!12;CL:0000542!5.61e-11!13;CL:0000051!5.61e-11!13;CL:0000084!1.16e-10!11;CL:0000827!1.16e-10!11;CL:0002031!1.28e-10!25;CL:0000738!6.82e-10!17;CL:0002087!6.82e-10!17;CL:0000624!4.51e-09!8;CL:0000893!1.48e-08!6;CL:0002489!1.48e-08!6;CL:0000898!1.48e-08!6;CL:0000809!1.48e-08!6;CL:0000810!1.48e-08!6;CL:0000895!1.48e-08!6;CL:0000808!1.48e-08!6;CL:0000894!1.48e-08!6;CL:0000806!1.48e-08!6;CL:0000807!1.48e-08!6;CL:0000805!1.48e-08!6;CL:0002425!1.48e-08!6;CL:0002436!1.48e-08!6;CL:0002427!1.48e-08!6;CL:0002428!1.48e-08!6;CL:0002429!1.48e-08!6;CL:0002433!1.48e-08!6;CL:0002431!1.48e-08!6;CL:0002432!1.48e-08!6;CL:0000791!5.68e-08!9;CL:0000789!5.68e-08!9;CL:0002420!5.68e-08!9;CL:0002419!5.68e-08!9;CL:0000790!5.68e-08!9;CL:0000988!1.15e-07!32;CL:0002032!1.15e-07!32;CL:0000037!1.15e-07!32;CL:0000566!1.15e-07!32;CL:0000837!1.15e-07!32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000624,2.17e-10,8;CL:0000815,5.62e-10,1;CL:0000792,5.62e-10,1;CL:0000791,2.66e-09,9;CL:0000789,2.66e-09,9;CL:0002420,2.66e-09,9;CL:0002419,2.66e-09,9;CL:0000790,2.66e-09,9;CL:0000084,1.03e-07,11;CL:0000827,1.03e-07,11;CL:0000838,4.06e-07,12 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!5.13e-31!29;UBERON:0002193!4.02e-28!48;UBERON:0002390!6.95e-26!45;UBERON:0003061!6.95e-26!45;UBERON:0002370!1.02e-23!23;UBERON:0000974!1.02e-23!23;UBERON:0004807!1.02e-23!23;UBERON:0005058!1.02e-23!23;UBERON:0003351!1.02e-23!23;UBERON:0009113!1.02e-23!23;UBERON:0003295!1.02e-23!23;UBERON:0009722!1.02e-23!23;UBERON:0005562!1.02e-23!23;UBERON:0007690!1.02e-23!23;UBERON:0006562!1.55e-22!24;UBERON:0003408!1.55e-22!24;UBERON:0001557!1.55e-22!24;UBERON:0001042!1.55e-22!24;UBERON:0008814!1.55e-22!24;UBERON:0009145!1.55e-22!24;UBERON:0000072!1.59e-19!27;UBERON:0002405!5.16e-17!70;UBERON:0000065!4.76e-16!41;UBERON:0001004!1.53e-15!42;UBERON:0005057!4.21e-15!51;UBERON:0000063!4.93e-14!35;UBERON:0003081!4.44e-13!88;UBERON:0001041!3.45e-09!92;UBERON:0000077!2.17e-08!97;UBERON:0002106!2.23e-08!6;UBERON:0004457!2.23e-08!6;UBERON:0000042!2.23e-08!6;UBERON:0004854!2.23e-08!6;UBERON:0009034!2.23e-08!6;UBERON:0002095!2.23e-08!6;UBERON:0004782!2.23e-08!6;UBERON:0003281!2.23e-08!6;UBERON:0009664!2.23e-08!6;UBERON:0002296!2.23e-08!6;UBERON:0005602!2.23e-08!6;UBERON:0001179!2.23e-08!6;UBERON:0006293!2.23e-08!6;UBERON:0005911!1.68e-07!69;UBERON:0003929!2.20e-07!55;UBERON:0002368!2.68e-07!60 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.26e-18,23;UBERON:0000974,2.26e-18,23;UBERON:0004807,2.26e-18,23;UBERON:0005058,2.26e-18,23;UBERON:0003351,2.26e-18,23;UBERON:0009113,2.26e-18,23;UBERON:0003295,2.26e-18,23;UBERON:0009722,2.26e-18,23;UBERON:0005562,2.26e-18,23;UBERON:0007690,2.26e-18,23;UBERON:0006562,1.34e-17,24;UBERON:0003408,1.34e-17,24;UBERON:0001557,1.34e-17,24;UBERON:0001042,1.34e-17,24;UBERON:0008814,1.34e-17,24;UBERON:0009145,1.34e-17,24;UBERON:0000072,1.27e-15,27;UBERON:0004177,1.56e-14,29;UBERON:0005057,1.56e-14,29;UBERON:0000077,5.33e-12,35;UBERON:0007811,1.17e-11,36;UBERON:0000065,3.34e-10,41;UBERON:0001004,5.94e-10,42;UBERON:0000153,1.03e-09,43;UBERON:0002390,2.87e-09,45;UBERON:0003061,2.87e-09,45;UBERON:0002193,1.14e-08,48;UBERON:0002405,1.14e-08,48;UBERON:0000490,4.12e-08,66;UBERON:0003929,1.61e-07,55;UBERON:0002368,7.32e-07,60 | |||
|phase1_expression=0,0,0,0,0,0,0,1.16210991097419,0.422366166455,0,0.34243593645101,0.159544317990673,1.02720437958723,1.31130603628496,0,0,0,0.630924330716475,0.137114433605739,0.42438965179803,0,0.0992909512008853,0.261199789138935,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5626706890476,0,0.588231488031014,0,1.94204141212461,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0.776813650941515,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0.234690248288502,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295301892880773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512612642393558,0.206386867963223,0,0.376736914009382,0.410082683163076,0.915112692826091,0.169978429993855,0,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,2.21207784439725,0,0,0.77952493786677,1.07416017400489,0.198681354781265,0.961563596159751,0.886137163047463,1.00966449948148,0.609654453239999,0.604957110821043,0.877120926657772,1.92423683280659,1.16876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,1.16210991097419,0.422366166455,0,0.34243593645101,0.159544317990673,1.02720437958723,1.31130603628496,0,0,0,0.630924330716475,0.137114433605739,0.42438965179803,0,0.0992909512008853,0.261199789138935,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5626706890476,0,0.588231488031014,0,1.94204141212461,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0.776813650941515,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0.234690248288502,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295301892880773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512612642393558,0.206386867963223,0,0.376736914009382,0.410082683163076,0.915112692826091,0.169978429993855,0,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,2.21207784439725,0,0,0.77952493786677,1.07416017400489,0.198681354781265,0.961563596159751,0.886137163047463,1.00966449948148,0.609654453239999,0.604957110821043,0.877120926657772,1.92423683280659,1.16876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr2:131845204..131845212,- | |short_description=p@chr2:131845204..131845212,- | ||
}} | }} |
Latest revision as of 02:23, 4 August 2015
Short description: | p@chr2:131845204..131845212, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:131845204..131845212, - |
Coexpression cluster: | MCL_coexpression_mm9:36 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD4-positive, alpha-beta T cell | 2.17e-10 | 8 |
regulatory T cell | 5.62e-10 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 5.62e-10 | 1 |
mature alpha-beta T cell | 2.66e-09 | 9 |
alpha-beta T cell | 2.66e-09 | 9 |
immature T cell | 2.66e-09 | 9 |
mature T cell | 2.66e-09 | 9 |
immature alpha-beta T cell | 2.66e-09 | 9 |
T cell | 1.03e-07 | 11 |
pro-T cell | 1.03e-07 | 11 |
lymphoid lineage restricted progenitor cell | 4.06e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
thymus | 2.26e-18 | 23 |
neck | 2.26e-18 | 23 |
respiratory system epithelium | 2.26e-18 | 23 |
hemolymphoid system gland | 2.26e-18 | 23 |
pharyngeal epithelium | 2.26e-18 | 23 |
thymic region | 2.26e-18 | 23 |
pharyngeal gland | 2.26e-18 | 23 |
entire pharyngeal arch endoderm | 2.26e-18 | 23 |
thymus primordium | 2.26e-18 | 23 |
early pharyngeal endoderm | 2.26e-18 | 23 |
pharynx | 1.34e-17 | 24 |
gland of gut | 1.34e-17 | 24 |
upper respiratory tract | 1.34e-17 | 24 |
chordate pharynx | 1.34e-17 | 24 |
pharyngeal arch system | 1.34e-17 | 24 |
pharyngeal region of foregut | 1.34e-17 | 24 |
segment of respiratory tract | 1.27e-15 | 27 |
hemopoietic organ | 1.56e-14 | 29 |
immune organ | 1.56e-14 | 29 |
mixed endoderm/mesoderm-derived structure | 5.33e-12 | 35 |
craniocervical region | 1.17e-11 | 36 |
respiratory tract | 3.34e-10 | 41 |
respiratory system | 5.94e-10 | 42 |
anterior region of body | 1.03e-09 | 43 |
hematopoietic system | 2.87e-09 | 45 |
blood island | 2.87e-09 | 45 |
hemolymphoid system | 1.14e-08 | 48 |
immune system | 1.14e-08 | 48 |
unilaminar epithelium | 4.12e-08 | 66 |
gut epithelium | 1.61e-07 | 55 |
endocrine gland | 7.32e-07 | 60 |