FFCP PHASE1:Mm9::chr2:132606442..132606466,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=146 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:132606442..132606466,+ | |||
|description=CAGE_peak_at_chr2:132606442..132606466,+ | |description=CAGE_peak_at_chr2:132606442..132606466,+ | ||
|id=chr2:132606442..132606466,+ | |id=chr2:132606442..132606466,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!2.21e-20!71;UBERON:0003075!2.21e-20!71;UBERON:0007284!2.21e-20!71;UBERON:0003080!2.77e-16!40;UBERON:0001049!3.50e-15!52;UBERON:0005068!3.50e-15!52;UBERON:0006241!3.50e-15!52;UBERON:0007135!3.50e-15!52;UBERON:0002021!3.55e-15!10;UBERON:0000411!3.55e-15!10;UBERON:0001950!3.55e-15!10;UBERON:0002780!1.07e-14!39;UBERON:0001890!1.07e-14!39;UBERON:0006240!1.07e-14!39;UBERON:0003056!1.79e-14!49;UBERON:0002616!2.15e-14!49;UBERON:0000955!4.91e-14!50;UBERON:0006238!4.91e-14!50;UBERON:0002619!1.62e-13!17;UBERON:0000956!3.83e-13!21;UBERON:0001869!3.83e-13!21;UBERON:0000203!3.83e-13!21;UBERON:0002791!4.47e-13!29;UBERON:0003528!4.47e-13!29;UBERON:0001893!4.47e-13!29;UBERON:0002020!8.95e-13!34;UBERON:0004121!1.04e-12!102;UBERON:0000924!1.04e-12!102;UBERON:0006601!1.04e-12!102;UBERON:0000033!7.46e-12!63;UBERON:0002369!1.35e-11!7;UBERON:0006858!1.35e-11!7;UBERON:0001017!9.97e-10!73;UBERON:0005743!9.97e-10!73;UBERON:0000073!2.28e-09!75;UBERON:0001016!2.28e-09!75;UBERON:0007811!1.05e-08!86;UBERON:0002342!5.22e-08!10;UBERON:0005062!5.22e-08!10;UBERON:0002298!9.10e-08!6;UBERON:0000153!1.24e-07!94;UBERON:0002950!4.70e-07!4;UBERON:0001891!4.70e-07!4;UBERON:0009616!4.70e-07!4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,4.32e-27,10;UBERON:0000411,4.32e-27,10;UBERON:0001950,4.32e-27,10;UBERON:0002619,4.35e-16,17;UBERON:0000956,4.45e-13,21;UBERON:0001869,4.45e-13,21;UBERON:0000203,4.45e-13,21;UBERON:0002780,4.27e-10,39;UBERON:0001890,4.27e-10,39;UBERON:0006240,4.27e-10,39;UBERON:0003080,7.61e-10,40;UBERON:0003528,1.56e-09,29;UBERON:0002791,1.56e-09,29;UBERON:0001893,1.56e-09,29;UBERON:0002616,1.45e-08,46;UBERON:0000955,2.21e-08,47;UBERON:0006238,2.21e-08,47;UBERON:0002020,3.71e-08,34;UBERON:0003056,4.86e-08,49;UBERON:0001049,1.42e-07,52;UBERON:0005068,1.42e-07,52;UBERON:0006241,1.42e-07,52;UBERON:0007135,1.42e-07,52;UBERON:0010314,1.48e-07,92;UBERON:0002369,2.13e-07,7;UBERON:0006858,2.13e-07,7;UBERON:0000073,2.71e-07,54 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485510353031154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0,0,0.279182999001381,0,0.30559649555362,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,17.3677302705845,0,0.913396434936424,0,0.753613202763113,0.470354828542819,6.78599593180248,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0,0,0.347648640384553,0.511430914660661,0.20778804455956,0.162241263067758,0,0,0,0,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0.102904612379284,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.7874732978144,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,1.84130094602871,0,1.3748254587495,0,0,0.675022500231806,1.35096360967266,0.453142408984205,1.55328093525546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.249810577937946,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485510353031154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0,0,0.279182999001381,0,0.30559649555362,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,17.3677302705845,0,0.913396434936424,0,0.753613202763113,0.470354828542819,6.78599593180248,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0,0,0.347648640384553,0.511430914660661,0.20778804455956,0.162241263067758,0,0,0,0,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0.102904612379284,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.7874732978144,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,1.84130094602871,0,1.3748254587495,0,0,0.675022500231806,1.35096360967266,0.453142408984205,1.55328093525546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.249810577937946,0,0,0,0,0 | ||
|short_description=p@chr2:132606442..132606466,+ | |short_description=p@chr2:132606442..132606466,+ | ||
}} | }} |
Latest revision as of 02:46, 4 August 2015
Short description: | p@chr2:132606442..132606466, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:132606442..132606466, + |
Coexpression cluster: | MCL_coexpression_mm9:146 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 4.32e-27 | 10 |
visual cortex | 4.32e-27 | 10 |
neocortex | 4.32e-27 | 10 |
regional part of cerebral cortex | 4.35e-16 | 17 |
cerebral cortex | 4.45e-13 | 21 |
cerebral hemisphere | 4.45e-13 | 21 |
pallium | 4.45e-13 | 21 |
regional part of forebrain | 4.27e-10 | 39 |
forebrain | 4.27e-10 | 39 |
future forebrain | 4.27e-10 | 39 |
anterior neural tube | 7.61e-10 | 40 |
brain grey matter | 1.56e-09 | 29 |
regional part of telencephalon | 1.56e-09 | 29 |
telencephalon | 1.56e-09 | 29 |
regional part of brain | 1.45e-08 | 46 |
brain | 2.21e-08 | 47 |
future brain | 2.21e-08 | 47 |
gray matter | 3.71e-08 | 34 |
pre-chordal neural plate | 4.86e-08 | 49 |
neural tube | 1.42e-07 | 52 |
neural rod | 1.42e-07 | 52 |
future spinal cord | 1.42e-07 | 52 |
neural keel | 1.42e-07 | 52 |
structure with developmental contribution from neural crest | 1.48e-07 | 92 |
adrenal gland | 2.13e-07 | 7 |
adrenal/interrenal gland | 2.13e-07 | 7 |
regional part of nervous system | 2.71e-07 | 54 |