FFCP PHASE1:Mm9::chr10:128157377..128157393,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=33 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:128157377..128157393,- | |||
|description=CAGE_peak_at_chr10:128157377..128157393,- | |description=CAGE_peak_at_chr10:128157377..128157393,- | ||
|id=chr10:128157377..128157393,- | |id=chr10:128157377..128157393,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000791,4.72e-11,9;CL:0000789,4.72e-11,9;CL:0002420,4.72e-11,9;CL:0002419,4.72e-11,9;CL:0000790,4.72e-11,9;CL:0000084,5.33e-09,11;CL:0000827,5.33e-09,11;CL:0000838,3.15e-08,12;CL:0000624,4.36e-08,8;CL:0000542,1.42e-07,13;CL:0000051,1.42e-07,13 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000072!4.62e-09!27;UBERON:0001004!6.04e-09!42;UBERON:0004177!1.37e-08!29;UBERON:0003408!1.47e-08!24;UBERON:0000065!1.65e-08!41;UBERON:0002370!4.37e-08!23;UBERON:0000974!4.37e-08!23;UBERON:0004807!4.37e-08!23;UBERON:0005058!4.37e-08!23;UBERON:0003351!4.37e-08!23;UBERON:0009113!4.37e-08!23;UBERON:0003295!4.37e-08!23;UBERON:0009722!4.37e-08!23;UBERON:0005562!4.37e-08!23;UBERON:0007690!4.37e-08!23;UBERON:0006562!2.12e-07!24;UBERON:0001557!2.12e-07!24;UBERON:0001042!2.12e-07!24;UBERON:0008814!2.12e-07!24;UBERON:0009145!2.12e-07!24 | |ontology_enrichment_uberon=UBERON:0000072!4.62e-09!27;UBERON:0001004!6.04e-09!42;UBERON:0004177!1.37e-08!29;UBERON:0003408!1.47e-08!24;UBERON:0000065!1.65e-08!41;UBERON:0002370!4.37e-08!23;UBERON:0000974!4.37e-08!23;UBERON:0004807!4.37e-08!23;UBERON:0005058!4.37e-08!23;UBERON:0003351!4.37e-08!23;UBERON:0009113!4.37e-08!23;UBERON:0003295!4.37e-08!23;UBERON:0009722!4.37e-08!23;UBERON:0005562!4.37e-08!23;UBERON:0007690!4.37e-08!23;UBERON:0006562!2.12e-07!24;UBERON:0001557!2.12e-07!24;UBERON:0001042!2.12e-07!24;UBERON:0008814!2.12e-07!24;UBERON:0009145!2.12e-07!24 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000072,1.11e-15,27;UBERON:0002370,1.40e-15,23;UBERON:0000974,1.40e-15,23;UBERON:0004807,1.40e-15,23;UBERON:0005058,1.40e-15,23;UBERON:0003351,1.40e-15,23;UBERON:0009113,1.40e-15,23;UBERON:0003295,1.40e-15,23;UBERON:0009722,1.40e-15,23;UBERON:0005562,1.40e-15,23;UBERON:0007690,1.40e-15,23;UBERON:0006562,7.30e-15,24;UBERON:0003408,7.30e-15,24;UBERON:0001557,7.30e-15,24;UBERON:0001042,7.30e-15,24;UBERON:0008814,7.30e-15,24;UBERON:0009145,7.30e-15,24;UBERON:0004177,5.10e-12,29;UBERON:0005057,5.10e-12,29;UBERON:0000065,1.27e-11,41;UBERON:0001004,2.69e-11,42;UBERON:0000077,1.12e-09,35;UBERON:0007811,2.31e-09,36;UBERON:0000153,1.43e-07,43;UBERON:0002390,3.66e-07,45;UBERON:0003061,3.66e-07,45;UBERON:0001041,4.52e-07,80;UBERON:0003929,8.53e-07,55 | |||
|phase1_expression=0,0,0,0.30246421130683,0,0.16787927191189,0,2.1950964985068,0.703943610758334,0.70219357896598,0.171217968225505,0.159544317990673,1.36960583944965,2.97229368224591,0.666219523631325,0,0,0.315462165358238,0.274228867211478,0.42438965179803,0.255129870453209,0,0,0.47997726838022,0.45881856213434,0,0,0.215471232685889,0.380046838912748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.304130793658544,0.367093504323363,0,0,0.219686182734472,0,0.139986421625363,0,0.503347818173209,5.07753499407941,8.73843877770406,0.257259436035947,0,1.03134418455488,0.202316460859598,0.528990979272033,0.633831403506179,0,0,0.449949858640699,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0.153606533256243,0.263772575460388,0.182975287204819,0,0.558365998002762,0,1.06958773443767,0.294628585473668,0.142371680799103,0,0.075726193333184,0.0755715601067855,0,0,0,0,0,0.448026887097336,0,0,0,0,0,0,0,0,0.865964164044856,0.760079596425296,1.01104889002957,0.11418387971906,0.517875767294343,0.29688427812965,0,0.304465478312141,0.230615497256059,0.150722640552623,0.352766121407114,0,0,0.144599356919912,0,0.161766849947409,0.662524555381181,0.969750506270444,0,0.292780797011547,0,1.27728527604296,0,0,0.127070227073065,0.299581278809645,0,0,0,0.255715457330331,0.20778804455956,0.162241263067758,0.101839363850316,0,0.252722758433675,0,0,0,0,0.30140963567143,0.204109497453984,0,0,0.776110112217047,0,0,0,0,0,0,0.205782136407943,0.199034266818493,0,0,0,0,0.234526059981096,0,0,0.196764231747404,0,0,0,0.233530684734339,0.16455984991348,0.32833492815819,0.0810688095458557,0.146199987425332,0.219550115291051,0,0,0,0.330418782983798,0.264450566663544,0.213288250535234,0.232236671860439,0,0,0.22237804384487,0,0.949058123089023,0,0.251335208800269,0.198956472041151,0.58489226135736,0,0.216138049874694,0,0,0,0,0.203651327845314,0.387904974335251,0.140271639780637,0.0632365371242573,0.147610147979602,0.156998727841375,0,0,0.166845105716094,0,0,0,0,0,0,0.162135226775035,0,1.43768206527355,0,0.624075346229121,0,0,0,0.369506380333209,0.189491411770485,0,0,0.234690248288502,0.167506257441816,0,0.195133647857799,0,0,0.318909537314974,0.655453258862952,1.55416483679306,0.578596234326046,0,0,0,0,0,0,0,0,0,0,0.430846795465598,0,0.668396022247182,0.283076530788832,0.809621403349789,0.876767573733936,0.395287777946524,0.321321316421807,0.141940085208269,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0,0,0.356737635204141,0.329098041204242,0,0,0,0,0.16488625294148,0.322928853391811,0.120625849856312,0.358117032009409,0.164140899745061,2.33184669303881,0,0.341741761595705,0.206386867963223,0,0.188368457004691,0.410082683163076,0.457556346413045,0,0,0.414599921413271,3.81868247206045,0,0,0.432021363287205,0.627264888043406,0.436725127492355,0.404593039154462,0.330613822901344,0,0.129614973291793,0.621339313086926,2.25477175473676,0.299033092087958,0,0,0.129159823477731,0.506868376472335,0.117357238645754,0.2604087696879,0.104859344425711,0.966336483304024,5.18454011264158,0.948033361884535,0,0.205421914329655,0.77952493786677,0.716106782669926,0.79472541912506,3.00488623799922,1.03382669022204,1.41353029927407,2.057583779685,3.2264379243789,5.26272555994663,3.07877893249054,3.85693777199178,0,0.443971906748129,0.538283139656854,0.335769232728157,0,0,0.73260649706906,0.643105137237198,0.501572104035363,0,0,0.572895513439397,0.171853182343688,0,0,0,0,0.453142408984205,0,0,0,0,0,0,0,0,0.206035057238894,0,0.252697211763798,0,0,0.0936415074698824,0.128050304809739,0.0574354689556133,0,0.115884325944855,0,0,0.294397840268795,0,0,0,0.145346416632329,0,0.0846146078916765,0.182927972872773,0.263069711437843,0,0,0,0,0,0,0.192906610981141,0,0,0.214871054048298,0.382576664137687,0,0 | |phase1_expression=0,0,0,0.30246421130683,0,0.16787927191189,0,2.1950964985068,0.703943610758334,0.70219357896598,0.171217968225505,0.159544317990673,1.36960583944965,2.97229368224591,0.666219523631325,0,0,0.315462165358238,0.274228867211478,0.42438965179803,0.255129870453209,0,0,0.47997726838022,0.45881856213434,0,0,0.215471232685889,0.380046838912748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.304130793658544,0.367093504323363,0,0,0.219686182734472,0,0.139986421625363,0,0.503347818173209,5.07753499407941,8.73843877770406,0.257259436035947,0,1.03134418455488,0.202316460859598,0.528990979272033,0.633831403506179,0,0,0.449949858640699,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0.153606533256243,0.263772575460388,0.182975287204819,0,0.558365998002762,0,1.06958773443767,0.294628585473668,0.142371680799103,0,0.075726193333184,0.0755715601067855,0,0,0,0,0,0.448026887097336,0,0,0,0,0,0,0,0,0.865964164044856,0.760079596425296,1.01104889002957,0.11418387971906,0.517875767294343,0.29688427812965,0,0.304465478312141,0.230615497256059,0.150722640552623,0.352766121407114,0,0,0.144599356919912,0,0.161766849947409,0.662524555381181,0.969750506270444,0,0.292780797011547,0,1.27728527604296,0,0,0.127070227073065,0.299581278809645,0,0,0,0.255715457330331,0.20778804455956,0.162241263067758,0.101839363850316,0,0.252722758433675,0,0,0,0,0.30140963567143,0.204109497453984,0,0,0.776110112217047,0,0,0,0,0,0,0.205782136407943,0.199034266818493,0,0,0,0,0.234526059981096,0,0,0.196764231747404,0,0,0,0.233530684734339,0.16455984991348,0.32833492815819,0.0810688095458557,0.146199987425332,0.219550115291051,0,0,0,0.330418782983798,0.264450566663544,0.213288250535234,0.232236671860439,0,0,0.22237804384487,0,0.949058123089023,0,0.251335208800269,0.198956472041151,0.58489226135736,0,0.216138049874694,0,0,0,0,0.203651327845314,0.387904974335251,0.140271639780637,0.0632365371242573,0.147610147979602,0.156998727841375,0,0,0.166845105716094,0,0,0,0,0,0,0.162135226775035,0,1.43768206527355,0,0.624075346229121,0,0,0,0.369506380333209,0.189491411770485,0,0,0.234690248288502,0.167506257441816,0,0.195133647857799,0,0,0.318909537314974,0.655453258862952,1.55416483679306,0.578596234326046,0,0,0,0,0,0,0,0,0,0,0.430846795465598,0,0.668396022247182,0.283076530788832,0.809621403349789,0.876767573733936,0.395287777946524,0.321321316421807,0.141940085208269,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0,0,0.356737635204141,0.329098041204242,0,0,0,0,0.16488625294148,0.322928853391811,0.120625849856312,0.358117032009409,0.164140899745061,2.33184669303881,0,0.341741761595705,0.206386867963223,0,0.188368457004691,0.410082683163076,0.457556346413045,0,0,0.414599921413271,3.81868247206045,0,0,0.432021363287205,0.627264888043406,0.436725127492355,0.404593039154462,0.330613822901344,0,0.129614973291793,0.621339313086926,2.25477175473676,0.299033092087958,0,0,0.129159823477731,0.506868376472335,0.117357238645754,0.2604087696879,0.104859344425711,0.966336483304024,5.18454011264158,0.948033361884535,0,0.205421914329655,0.77952493786677,0.716106782669926,0.79472541912506,3.00488623799922,1.03382669022204,1.41353029927407,2.057583779685,3.2264379243789,5.26272555994663,3.07877893249054,3.85693777199178,0,0.443971906748129,0.538283139656854,0.335769232728157,0,0,0.73260649706906,0.643105137237198,0.501572104035363,0,0,0.572895513439397,0.171853182343688,0,0,0,0,0.453142408984205,0,0,0,0,0,0,0,0,0.206035057238894,0,0.252697211763798,0,0,0.0936415074698824,0.128050304809739,0.0574354689556133,0,0.115884325944855,0,0,0.294397840268795,0,0,0,0.145346416632329,0,0.0846146078916765,0.182927972872773,0.263069711437843,0,0,0,0,0,0,0.192906610981141,0,0,0.214871054048298,0.382576664137687,0,0 | ||
|short_description=p@chr10:128157377..128157393,- | |short_description=p@chr10:128157377..128157393,- | ||
}} | }} |
Latest revision as of 03:07, 4 August 2015
Short description: | p@chr10:128157377..128157393, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:128157377..128157393, - |
Coexpression cluster: | MCL_coexpression_mm9:33 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 4.72e-11 | 9 |
alpha-beta T cell | 4.72e-11 | 9 |
immature T cell | 4.72e-11 | 9 |
mature T cell | 4.72e-11 | 9 |
immature alpha-beta T cell | 4.72e-11 | 9 |
T cell | 5.33e-09 | 11 |
pro-T cell | 5.33e-09 | 11 |
lymphoid lineage restricted progenitor cell | 3.15e-08 | 12 |
CD4-positive, alpha-beta T cell | 4.36e-08 | 8 |
lymphocyte | 1.42e-07 | 13 |
common lymphoid progenitor | 1.42e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
segment of respiratory tract | 1.11e-15 | 27 |
thymus | 1.40e-15 | 23 |
neck | 1.40e-15 | 23 |
respiratory system epithelium | 1.40e-15 | 23 |
hemolymphoid system gland | 1.40e-15 | 23 |
pharyngeal epithelium | 1.40e-15 | 23 |
thymic region | 1.40e-15 | 23 |
pharyngeal gland | 1.40e-15 | 23 |
entire pharyngeal arch endoderm | 1.40e-15 | 23 |
thymus primordium | 1.40e-15 | 23 |
early pharyngeal endoderm | 1.40e-15 | 23 |
pharynx | 7.30e-15 | 24 |
gland of gut | 7.30e-15 | 24 |
upper respiratory tract | 7.30e-15 | 24 |
chordate pharynx | 7.30e-15 | 24 |
pharyngeal arch system | 7.30e-15 | 24 |
pharyngeal region of foregut | 7.30e-15 | 24 |
hemopoietic organ | 5.10e-12 | 29 |
immune organ | 5.10e-12 | 29 |
respiratory tract | 1.27e-11 | 41 |
respiratory system | 2.69e-11 | 42 |
mixed endoderm/mesoderm-derived structure | 1.12e-09 | 35 |
craniocervical region | 2.31e-09 | 36 |
anterior region of body | 1.43e-07 | 43 |
hematopoietic system | 3.66e-07 | 45 |
blood island | 3.66e-07 | 45 |
foregut | 4.52e-07 | 80 |
gut epithelium | 8.53e-07 | 55 |