FFCP PHASE1:Mm9::chr10:128183513..128183530,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=33 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:128183513..128183530,+ | |||
|description=CAGE_peak_at_chr10:128183513..128183530,+ | |description=CAGE_peak_at_chr10:128183513..128183530,+ | ||
|id=chr10:128183513..128183530,+ | |id=chr10:128183513..128183530,+ | ||
|ontology_enrichment_celltype=CL:0000791!9.28e-26!9;CL:0000789!9.28e-26!9;CL:0002420!9.28e-26!9;CL:0002419!9.28e-26!9;CL:0000790!9.28e-26!9;CL:0000624!9.05e-23!8;CL:0000084!8.94e-21!11;CL:0000827!8.94e-21!11;CL:0000838!6.62e-19!12;CL:0000542!2.53e-17!13;CL:0000051!2.53e-17!13;CL:0000893!4.67e-17!6;CL:0002489!4.67e-17!6;CL:0000898!4.67e-17!6;CL:0000809!4.67e-17!6;CL:0000810!4.67e-17!6;CL:0000895!4.67e-17!6;CL:0000808!4.67e-17!6;CL:0000894!4.67e-17!6;CL:0000806!4.67e-17!6;CL:0000807!4.67e-17!6;CL:0000805!4.67e-17!6;CL:0002425!4.67e-17!6;CL:0002436!4.67e-17!6;CL:0002427!4.67e-17!6;CL:0002428!4.67e-17!6;CL:0002429!4.67e-17!6;CL:0002433!4.67e-17!6;CL:0002431!4.67e-17!6;CL:0002432!4.67e-17!6;CL:0000738!7.43e-13!17;CL:0002087!7.43e-13!17;CL:0002031!3.70e-10!25;CL:0000988!1.61e-07!32;CL:0002032!1.61e-07!32;CL:0000037!1.61e-07!32;CL:0000566!1.61e-07!32;CL:0000837!1.61e-07!32 | |ontology_enrichment_celltype=CL:0000791!9.28e-26!9;CL:0000789!9.28e-26!9;CL:0002420!9.28e-26!9;CL:0002419!9.28e-26!9;CL:0000790!9.28e-26!9;CL:0000624!9.05e-23!8;CL:0000084!8.94e-21!11;CL:0000827!8.94e-21!11;CL:0000838!6.62e-19!12;CL:0000542!2.53e-17!13;CL:0000051!2.53e-17!13;CL:0000893!4.67e-17!6;CL:0002489!4.67e-17!6;CL:0000898!4.67e-17!6;CL:0000809!4.67e-17!6;CL:0000810!4.67e-17!6;CL:0000895!4.67e-17!6;CL:0000808!4.67e-17!6;CL:0000894!4.67e-17!6;CL:0000806!4.67e-17!6;CL:0000807!4.67e-17!6;CL:0000805!4.67e-17!6;CL:0002425!4.67e-17!6;CL:0002436!4.67e-17!6;CL:0002427!4.67e-17!6;CL:0002428!4.67e-17!6;CL:0002429!4.67e-17!6;CL:0002433!4.67e-17!6;CL:0002431!4.67e-17!6;CL:0002432!4.67e-17!6;CL:0000738!7.43e-13!17;CL:0002087!7.43e-13!17;CL:0002031!3.70e-10!25;CL:0000988!1.61e-07!32;CL:0002032!1.61e-07!32;CL:0000037!1.61e-07!32;CL:0000566!1.61e-07!32;CL:0000837!1.61e-07!32 | ||
|ontology_enrichment_celltype_v019_2=CL:0000791,2.88e-19,9;CL:0000789,2.88e-19,9;CL:0002420,2.88e-19,9;CL:0002419,2.88e-19,9;CL:0000790,2.88e-19,9;CL:0000084,8.96e-16,11;CL:0000827,8.96e-16,11;CL:0000838,1.84e-14,12;CL:0000624,4.88e-14,8;CL:0000542,2.38e-13,13;CL:0000051,2.38e-13,13;CL:0000738,3.33e-10,17;CL:0002087,3.33e-10,17;CL:0000625,1.56e-08,1;CL:0000815,4.10e-08,1;CL:0000792,4.10e-08,1;CL:0002031,6.50e-07,25 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!2.79e-42!23;UBERON:0000974!2.79e-42!23;UBERON:0004807!2.79e-42!23;UBERON:0005058!2.79e-42!23;UBERON:0003351!2.79e-42!23;UBERON:0009113!2.79e-42!23;UBERON:0003295!2.79e-42!23;UBERON:0009722!2.79e-42!23;UBERON:0005562!2.79e-42!23;UBERON:0007690!2.79e-42!23;UBERON:0006562!2.40e-40!24;UBERON:0003408!2.40e-40!24;UBERON:0001557!2.40e-40!24;UBERON:0001042!2.40e-40!24;UBERON:0008814!2.40e-40!24;UBERON:0009145!2.40e-40!24;UBERON:0000072!2.13e-35!27;UBERON:0004177!1.15e-32!29;UBERON:0000063!2.75e-29!35;UBERON:0002193!7.89e-25!48;UBERON:0000065!2.65e-24!41;UBERON:0001004!1.28e-23!42;UBERON:0002390!6.70e-22!45;UBERON:0003061!6.70e-22!45;UBERON:0005057!9.30e-17!51;UBERON:0002405!1.58e-15!70;UBERON:0003929!3.11e-15!55;UBERON:0002368!1.29e-13!60;UBERON:0005911!1.17e-12!69;UBERON:0002530!3.03e-12!65;UBERON:0000490!5.37e-12!66;UBERON:0003081!2.13e-11!88;UBERON:0000949!1.19e-10!72;UBERON:0000064!1.53e-09!99;UBERON:0001041!2.08e-08!92;UBERON:0007811!3.02e-08!86;UBERON:0000153!3.46e-08!94;UBERON:0000077!9.37e-08!97 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.96e-28,23;UBERON:0000974,2.96e-28,23;UBERON:0004807,2.96e-28,23;UBERON:0005058,2.96e-28,23;UBERON:0003351,2.96e-28,23;UBERON:0009113,2.96e-28,23;UBERON:0003295,2.96e-28,23;UBERON:0009722,2.96e-28,23;UBERON:0005562,2.96e-28,23;UBERON:0007690,2.96e-28,23;UBERON:0006562,4.81e-27,24;UBERON:0003408,4.81e-27,24;UBERON:0001557,4.81e-27,24;UBERON:0001042,4.81e-27,24;UBERON:0008814,4.81e-27,24;UBERON:0009145,4.81e-27,24;UBERON:0000072,6.00e-24,27;UBERON:0004177,3.07e-22,29;UBERON:0005057,3.07e-22,29;UBERON:0000077,2.82e-18,35;UBERON:0007811,9.61e-18,36;UBERON:0000065,1.82e-15,41;UBERON:0001004,4.46e-15,42;UBERON:0000153,1.05e-14,43;UBERON:0002390,5.23e-14,45;UBERON:0003061,5.23e-14,45;UBERON:0002193,4.51e-13,48;UBERON:0002405,4.51e-13,48;UBERON:0003929,2.78e-11,55;UBERON:0002368,2.95e-10,60;UBERON:0002530,2.18e-09,65;UBERON:0000490,3.14e-09,66;UBERON:0005911,8.80e-09,69;UBERON:0000949,2.27e-08,72;UBERON:0001041,2.01e-07,80;UBERON:0003081,9.77e-07,87 | |||
|phase1_expression=0,0,0,0,0,0,0,2.32421982194837,0.703943610758334,0.468129052643987,0.856089841127525,0.478632953972018,2.39681021903688,2.27293046289393,0,0,0,0,0,0.84877930359606,0.0850432901510698,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.62681071005672,4.7053131879945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517875767294343,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.8441000856536,0.202725215290164,0.410843828659309,0,0.358053391334963,0.596044064343795,1.20195449519969,1.9199638532695,1.9183625490148,1.752756553065,2.11734988787365,0.974578807397524,3.07877893249054,3.97381467417334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,2.32421982194837,0.703943610758334,0.468129052643987,0.856089841127525,0.478632953972018,2.39681021903688,2.27293046289393,0,0,0,0,0,0.84877930359606,0.0850432901510698,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.62681071005672,4.7053131879945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517875767294343,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.8441000856536,0.202725215290164,0.410843828659309,0,0.358053391334963,0.596044064343795,1.20195449519969,1.9199638532695,1.9183625490148,1.752756553065,2.11734988787365,0.974578807397524,3.07877893249054,3.97381467417334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0,0,0 | ||
|short_description=p@chr10:128183513..128183530,+ | |short_description=p@chr10:128183513..128183530,+ | ||
}} | }} |
Latest revision as of 03:14, 4 August 2015
Short description: | p@chr10:128183513..128183530, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:128183513..128183530, + |
Coexpression cluster: | MCL_coexpression_mm9:33 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 2.88e-19 | 9 |
alpha-beta T cell | 2.88e-19 | 9 |
immature T cell | 2.88e-19 | 9 |
mature T cell | 2.88e-19 | 9 |
immature alpha-beta T cell | 2.88e-19 | 9 |
T cell | 8.96e-16 | 11 |
pro-T cell | 8.96e-16 | 11 |
lymphoid lineage restricted progenitor cell | 1.84e-14 | 12 |
CD4-positive, alpha-beta T cell | 4.88e-14 | 8 |
lymphocyte | 2.38e-13 | 13 |
common lymphoid progenitor | 2.38e-13 | 13 |
leukocyte | 3.33e-10 | 17 |
nongranular leukocyte | 3.33e-10 | 17 |
CD8-positive, alpha-beta T cell | 1.56e-08 | 1 |
regulatory T cell | 4.10e-08 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 4.10e-08 | 1 |
hematopoietic lineage restricted progenitor cell | 6.50e-07 | 25 |