FFCP PHASE1:Mm9::chr16:90616204..90616205,-: Difference between revisions
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|id=chr16:90616204..90616205,-
|short_description=p@chr16:90616204..90616205,-
|description=CAGE_peak_at_chr16:90616204..90616205,-
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=184 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr16:90616204..90616205,- | |||
|description=CAGE_peak_at_chr16:90616204..90616205,- | |||
|id=chr16:90616204..90616205,- | |||
|ontology_enrichment_celltype=CL:0002319!4.48e-35!43;CL:0000221!3.13e-34!44;CL:0000133!3.13e-34!44;CL:0000055!7.24e-30!50;CL:0002609!1.11e-29!6;CL:0000540!1.39e-27!33;CL:0000047!1.39e-27!33;CL:0000031!1.39e-27!33;CL:0000404!1.39e-27!33;CL:0000117!1.41e-24!23;CL:0000337!1.41e-24!23;CL:0000393!4.86e-23!39;CL:0000211!4.86e-23!39;CL:0002321!1.05e-20!70;CL:0000220!1.05e-20!70;CL:0002608!3.66e-16!3;CL:0000548!1.09e-11!115;CL:0000004!1.09e-11!115;CL:0000255!1.09e-11!115;CL:0002371!2.49e-11!118;CL:0000144!5.47e-11!121;CL:0000012!5.47e-11!121;CL:0002603!5.51e-11!2;CL:0002611!6.17e-11!2;CL:0000723!1.11e-08!91;CL:0000048!1.11e-08!91;CL:0000128!5.11e-08!6;CL:0000126!5.11e-08!6;CL:0000127!5.11e-08!6;CL:0000333!5.22e-08!10;CL:0000095!5.22e-08!10;CL:0000243!5.22e-08!10;CL:0000123!5.22e-08!10;CL:0000125!5.22e-08!10;CL:0000030!5.22e-08!10;CL:0000339!5.22e-08!10;CL:0000034!5.22e-08!97 | |||
|ontology_enrichment_celltype_v019_2=CL:0002609,8.87e-20,6;CL:0000540,1.03e-18,33;CL:0000047,1.03e-18,33;CL:0000031,1.03e-18,33;CL:0000404,1.03e-18,33;CL:0002608,5.00e-18,3;CL:0000393,7.07e-16,39;CL:0000211,7.07e-16,39;CL:0002319,2.01e-14,43;CL:0000221,4.23e-14,44;CL:0000133,4.23e-14,44;CL:0000117,5.55e-14,23;CL:0000337,5.55e-14,23;CL:0002321,6.38e-09,70;CL:0002611,1.52e-07,2;CL:0000723,7.08e-07,91;CL:0000048,7.08e-07,91 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!3.57e-19!75;UBERON:0001016!3.57e-19!75;UBERON:0001017!1.70e-17!73;UBERON:0005743!1.70e-17!73;UBERON:0004121!1.75e-13!102;UBERON:0000924!1.75e-13!102;UBERON:0006601!1.75e-13!102;UBERON:0002020!2.40e-13!34;UBERON:0001049!4.11e-12!52;UBERON:0005068!4.11e-12!52;UBERON:0006241!4.11e-12!52;UBERON:0007135!4.11e-12!52;UBERON:0002256!6.17e-11!2;UBERON:0003076!2.68e-10!12;UBERON:0003057!2.68e-10!12;UBERON:0002346!5.04e-10!71;UBERON:0003075!5.04e-10!71;UBERON:0007284!5.04e-10!71;UBERON:0001948!1.59e-09!5;UBERON:0002315!1.59e-09!5;UBERON:0000956!3.39e-08!21;UBERON:0001869!3.39e-08!21;UBERON:0000203!3.39e-08!21;UBERON:0002240!5.11e-08!6;UBERON:0005174!5.11e-08!6;UBERON:0001137!5.11e-08!6;UBERON:0002791!8.35e-08!29;UBERON:0003528!8.35e-08!29;UBERON:0001893!8.35e-08!29;UBERON:0000011!1.42e-07!3;UBERON:0000010!2.32e-07!11;UBERON:0001954!3.32e-07!7;UBERON:0003022!3.32e-07!7;UBERON:0002421!3.32e-07!7;UBERON:0000349!3.32e-07!7;UBERON:0002600!3.32e-07!7;UBERON:0002616!4.11e-07!49;UBERON:0000955!6.03e-07!50;UBERON:0006238!6.03e-07!50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.46e-09,34;UBERON:0001017,1.47e-08,73;UBERON:0001016,2.47e-08,75;UBERON:0001954,2.72e-08,7;UBERON:0003022,2.72e-08,7;UBERON:0002421,2.72e-08,7;UBERON:0000349,2.72e-08,7;UBERON:0002600,2.72e-08,7;UBERON:0002256,1.52e-07,2;UBERON:0003528,2.07e-07,29;UBERON:0002791,2.07e-07,29;UBERON:0001893,2.07e-07,29;UBERON:0002346,3.12e-07,64;UBERON:0003075,3.12e-07,64;UBERON:0007284,3.12e-07,64 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0.65407546914134,0,0,0.279972843250725,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,8.70992743391212,0.135005938331691,0.210324961351382,3.99911378165325,0.220868540951614,0.244981598429908,13.801747826626,27.5765635983006,0,0,0,0,1.28082701043374,0,0,0,0,0,0.427115042397309,0,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.89304931649754,0,0,0.238968797952552,0,2.54768877709949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0.65407546914134,0,0,0.279972843250725,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,8.70992743391212,0.135005938331691,0.210324961351382,3.99911378165325,0.220868540951614,0.244981598429908,13.801747826626,27.5765635983006,0,0,0,0,1.28082701043374,0,0,0,0,0,0.427115042397309,0,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.89304931649754,0,0,0.238968797952552,0,2.54768877709949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr16:90616204..90616205,- | |||
}} | }} |
Latest revision as of 04:12, 4 August 2015
Short description: | p@chr16:90616204..90616205, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:90616204..90616205, - |
Coexpression cluster: | MCL_coexpression_mm9:184 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of cerebral cortex | 8.87e-20 | 6 |
neuron | 1.03e-18 | 33 |
neuronal stem cell | 1.03e-18 | 33 |
neuroblast | 1.03e-18 | 33 |
electrically signaling cell | 1.03e-18 | 33 |
hippocampal neuron | 5.00e-18 | 3 |
electrically responsive cell | 7.07e-16 | 39 |
electrically active cell | 7.07e-16 | 39 |
neural cell | 2.01e-14 | 43 |
ectodermal cell | 4.23e-14 | 44 |
neurectodermal cell | 4.23e-14 | 44 |
CNS neuron (sensu Vertebrata) | 5.55e-14 | 23 |
neuroblast (sensu Vertebrata) | 5.55e-14 | 23 |
embryonic cell | 6.38e-09 | 70 |
neuron of the dorsal spinal cord | 1.52e-07 | 2 |
somatic stem cell | 7.08e-07 | 91 |
multi fate stem cell | 7.08e-07 | 91 |
Ontology term | p-value | n |
---|---|---|
gray matter | 1.46e-09 | 34 |
central nervous system | 1.47e-08 | 73 |
nervous system | 2.47e-08 | 75 |
Ammon's horn | 2.72e-08 | 7 |
lobe parts of cerebral cortex | 2.72e-08 | 7 |
hippocampal formation | 2.72e-08 | 7 |
limbic system | 2.72e-08 | 7 |
limbic lobe | 2.72e-08 | 7 |
dorsal horn of spinal cord | 1.52e-07 | 2 |
brain grey matter | 2.07e-07 | 29 |
regional part of telencephalon | 2.07e-07 | 29 |
telencephalon | 2.07e-07 | 29 |
neurectoderm | 3.12e-07 | 64 |
neural plate | 3.12e-07 | 64 |
presumptive neural plate | 3.12e-07 | 64 |