FFCP PHASE1:Mm9::chr7:133415942..133415957,+: Difference between revisions
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{{FFCP|EntrezGene=104175|HGNC=|MCL_coexpression_id=42|UniProt=Q8QZX0|association_with_transcript=-175bp_to_ENSMUST00000056028,NM_145587,uc009jqw.1_5end|description=CAGE_peak_8_at_Sbk1_5end|id=chr7:133415942..133415957,+|ontology_enrichment_celltype=CL:0000117!6.35e-15!23;CL:0000337!6.35e-15!23;CL:0000540!9.15e-10!33;CL:0000047!9.15e-10!33;CL:0000031!9.15e-10!33;CL:0000404!9.15e-10!33;CL:0000221!3.08e-07!44;CL:0000133!3.08e-07!44;CL:0002319!3.86e-07!43;CL:0000393!8.72e-07!39;CL:0000211!8.72e-07!39|ontology_enrichment_celltype_v019_2=CL:0000117,3.11e-39,23;CL:0000337,3.11e-39,23;CL:0000540,1.28e-26,33;CL:0000047,1.28e-26,33;CL:0000031,1.28e-26,33;CL:0000404,1.28e-26,33;CL:0000393,3.79e-22,39;CL:0000211,3.79e-22,39;CL:0002319,7.40e-20,43;CL:0000221,2.38e-19,44;CL:0000133,2.38e-19,44;CL:0002609,9.26e-18,6;CL:0002613,2.69e-14,3;CL:0000120,5.62e-13,3;CL:0002321,3.19e-11,70;CL:0000723,2.66e-09,91;CL:0000048,2.66e-09,91;CL:0000034,1.48e-08,97|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!3.10e-09!71;UBERON:0003075!3.10e-09!71;UBERON:0007284!3.10e-09!71;UBERON:0001049!5.82e-09!52;UBERON:0005068!5.82e-09!52;UBERON:0006241!5.82e-09!52;UBERON:0007135!5.82e-09!52;UBERON:0002020!8.68e-09!34;UBERON:0000033!1.44e-08!63;UBERON:0000073!3.39e-08!75;UBERON:0001016!3.39e-08!75;UBERON:0001017!4.33e-08!73;UBERON:0005743!4.33e-08!73;UBERON:0003056!7.67e-08!49;UBERON:0004121!1.28e-07!102;UBERON:0000924!1.28e-07!102;UBERON:0006601!1.28e-07!102;UBERON:0000153!1.63e-07!94;UBERON:0002616!1.89e-07!49;UBERON:0000955!4.39e-07!50;UBERON:0006238!4.39e-07!50|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.98e-16,34;UBERON:0001017,2.41e-16,73;UBERON:0001016,7.87e-16,75;UBERON:0000073,1.16e-15,54;UBERON:0001049,3.37e-14,52;UBERON:0005068,3.37e-14,52;UBERON:0006241,3.37e-14,52;UBERON:0007135,3.37e-14,52;UBERON:0004121,7.06e-12,95;UBERON:0000924,7.06e-12,95;UBERON:0006601,7.06e-12,95;UBERON:0002346,4.40e-11,64;UBERON:0003075,4.40e-11,64;UBERON:0007284,4.40e-11,64;UBERON:0003528,6.08e-11,29;UBERON:0002791,6.08e-11,29;UBERON:0001893,6.08e-11,29;UBERON:0002616,7.19e-10,46;UBERON:0000955,1.28e-09,47;UBERON:0006238,1.28e-09,47;UBERON:0010371,2.05e-09,73;UBERON:0003076,4.91e-09,12;UBERON:0003057,4.91e-09,12;UBERON:0000369,9.15e-09,5;UBERON:0002435,9.15e-09,5;UBERON:0000204,9.15e-09,5;UBERON:0010082,9.15e-09,5;UBERON:0001948,3.48e-08,5;UBERON:0002315,3.48e-08,5;UBERON:0002780,8.60e-08,39;UBERON:0001890,8.60e-08,39;UBERON:0006240,8.60e-08,39;UBERON:0003080,1.46e-07,40;UBERON:0010314,5.80e-07,92;UBERON:0000956,6.65e-07,21;UBERON:0001869,6.65e-07,21;UBERON:0000203,6.65e-07,21;UBERON:0002240,6.80e-07,6;UBERON:0005174,6.80e-07,6;UBERON:0001137,6.80e-07,6|phase1_expression=0.160148847104794,0,0,0.30246421130683,0,0,0,0.129123323441576,0,0.234064526321993,0,0,0.342401459862411,0,0,0,0,1.10411757875383,0.685572168028694,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0.139986421625363,0,0.503347818173209,0.725362142011344,0,0,0,0,2.63011399117477,1.05798195854407,1.26766280701236,0.338844532069132,0,0,0,0,0,0,1.55534418462716,2.70011876663381,2.10324961351382,0.571301968807607,1.32521124570968,1.71487118900936,2.20444583341944,0.919218786610021,1.10115880999389,0.127687338085188,0.153606533256243,3.16527090552465,3.56801810049398,2.6045668527838,0.558365998002762,0,0.45839474333043,2.35702868378934,0.854230084794618,2.05039390407831,0.075726193333184,0.0755715601067855,0.289864488701678,0,0,0,0,0,0.280888840263504,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0.148442139064825,0,0,0,0,0.117588707135705,0.125666591329675,0,0,0,0.161766849947409,0,0.484875253135222,0,3.51336956413857,15.7085030110091,0,0,0,0,0,0.915001205637253,0.753926112677186,0.173824320192276,0.511430914660661,0,0.162241263067758,0.203678727700633,0.248813941220186,0.252722758433675,0,0.260240885925407,0.919608417733892,0.540186389416048,0.150704817835715,0.612328492361951,0.512454881139399,0.937017245597288,0,0.431135985865684,0.567318240503458,0.175951124163949,0.43839146485515,0,0,0.205782136407943,0.398068533636986,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0.116765342367169,0,0,0.0810688095458557,0,0,0,0.210289948564127,2.26390147234426,0,0,0.213288250535234,0,0.257734922644187,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0.114248512609729,0,0,0,0.140271639780637,0,0,0.156998727841375,0.246794327843601,0,0,0,0,0.202860121388503,0,0,0.287696137450811,0.162135226775035,0,0,0,0,0,0.538192240565737,0,0,0.189491411770485,0.325929952884052,0.509235257325564,0,0,0,0.195133647857799,0.157635144106191,0,0,0,0,0,0,0,0,0,0,0.234423373184406,0,0,0,0,0.215423397732799,0,0,0.283076530788832,0,0,0,0,0.141940085208269,0.178065603667255,0.162886959353576,0,0,0.242780636154981,0.302323556964751,0,0,0,0,0,0,0.316036757935816,0,0,0,0.36012218806262,0.388076051348264,0,0.532020700926821,0.535106452806212,0,0.304464949114599,0,0,0,0,0,0.120625849856312,0.358117032009409,0,0,0,0.170870880797853,0,0,0.188368457004691,0.136694227721025,0,0,0,0,0,0.158167996790568,0,0,0,0,0,0,0,0,0,0,0.598066184175915,0.496375471371293,0.388902376688095,0,0.506868376472335,0.234714477291508,0.2604087696879,0,0,0,0,0.202725215290164,0,0,0,0.198681354781265,0.120195449519969,0,0.302899349844443,0.0762068066549998,0,0.0974578807397524,0.0962118416403295,0.233753804363138,0,0,0,0,0,0,0.36630324853453,0,0,0.564751842617067,0,0,0.343706364687375,0,0,0,0,0.453142408984205,0,1.66059756134683,1.19707462020309,0.512200817262403,0.486213434136588,0.209613162627982,0.919217542250071,0,0,0.64183841918363,0,0,0.565879024158229,0.468207537349412,0.192075457214608,0.229741875822453,0,0.115884325944855,0.38581844092741,0.412085900803307,0.147198920134397,0,0.887379030796687,0.476872379894642,0.290692833264657,0,0.0846146078916765,0,0.263069711437843,0.271608227691724,0,0.237270036248348,0.492522411877817,0.818462086339379,0.309873682371932,0.192906610981141,0.999242311751784,0.467863216890817,0,0,0,0|short_description=p8@Sbk1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:104175 | |||
|HGNC= | |||
|MCL_coexpression_id=42 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8QZX0 | |||
|association_with_transcript=-175bp_to_ENSMUST00000056028,NM_145587,uc009jqw.1_5end | |||
|cluster_id=chr7:133415942..133415957,+ | |||
|description=CAGE_peak_8_at_Sbk1_5end | |||
|id=chr7:133415942..133415957,+ | |||
|ontology_enrichment_celltype=CL:0000117!6.35e-15!23;CL:0000337!6.35e-15!23;CL:0000540!9.15e-10!33;CL:0000047!9.15e-10!33;CL:0000031!9.15e-10!33;CL:0000404!9.15e-10!33;CL:0000221!3.08e-07!44;CL:0000133!3.08e-07!44;CL:0002319!3.86e-07!43;CL:0000393!8.72e-07!39;CL:0000211!8.72e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.11e-39,23;CL:0000337,3.11e-39,23;CL:0000540,1.28e-26,33;CL:0000047,1.28e-26,33;CL:0000031,1.28e-26,33;CL:0000404,1.28e-26,33;CL:0000393,3.79e-22,39;CL:0000211,3.79e-22,39;CL:0002319,7.40e-20,43;CL:0000221,2.38e-19,44;CL:0000133,2.38e-19,44;CL:0002609,9.26e-18,6;CL:0002613,2.69e-14,3;CL:0000120,5.62e-13,3;CL:0002321,3.19e-11,70;CL:0000723,2.66e-09,91;CL:0000048,2.66e-09,91;CL:0000034,1.48e-08,97 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!3.10e-09!71;UBERON:0003075!3.10e-09!71;UBERON:0007284!3.10e-09!71;UBERON:0001049!5.82e-09!52;UBERON:0005068!5.82e-09!52;UBERON:0006241!5.82e-09!52;UBERON:0007135!5.82e-09!52;UBERON:0002020!8.68e-09!34;UBERON:0000033!1.44e-08!63;UBERON:0000073!3.39e-08!75;UBERON:0001016!3.39e-08!75;UBERON:0001017!4.33e-08!73;UBERON:0005743!4.33e-08!73;UBERON:0003056!7.67e-08!49;UBERON:0004121!1.28e-07!102;UBERON:0000924!1.28e-07!102;UBERON:0006601!1.28e-07!102;UBERON:0000153!1.63e-07!94;UBERON:0002616!1.89e-07!49;UBERON:0000955!4.39e-07!50;UBERON:0006238!4.39e-07!50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.98e-16,34;UBERON:0001017,2.41e-16,73;UBERON:0001016,7.87e-16,75;UBERON:0000073,1.16e-15,54;UBERON:0001049,3.37e-14,52;UBERON:0005068,3.37e-14,52;UBERON:0006241,3.37e-14,52;UBERON:0007135,3.37e-14,52;UBERON:0004121,7.06e-12,95;UBERON:0000924,7.06e-12,95;UBERON:0006601,7.06e-12,95;UBERON:0002346,4.40e-11,64;UBERON:0003075,4.40e-11,64;UBERON:0007284,4.40e-11,64;UBERON:0003528,6.08e-11,29;UBERON:0002791,6.08e-11,29;UBERON:0001893,6.08e-11,29;UBERON:0002616,7.19e-10,46;UBERON:0000955,1.28e-09,47;UBERON:0006238,1.28e-09,47;UBERON:0010371,2.05e-09,73;UBERON:0003076,4.91e-09,12;UBERON:0003057,4.91e-09,12;UBERON:0000369,9.15e-09,5;UBERON:0002435,9.15e-09,5;UBERON:0000204,9.15e-09,5;UBERON:0010082,9.15e-09,5;UBERON:0001948,3.48e-08,5;UBERON:0002315,3.48e-08,5;UBERON:0002780,8.60e-08,39;UBERON:0001890,8.60e-08,39;UBERON:0006240,8.60e-08,39;UBERON:0003080,1.46e-07,40;UBERON:0010314,5.80e-07,92;UBERON:0000956,6.65e-07,21;UBERON:0001869,6.65e-07,21;UBERON:0000203,6.65e-07,21;UBERON:0002240,6.80e-07,6;UBERON:0005174,6.80e-07,6;UBERON:0001137,6.80e-07,6 | |||
|phase1_expression=0.160148847104794,0,0,0.30246421130683,0,0,0,0.129123323441576,0,0.234064526321993,0,0,0.342401459862411,0,0,0,0,1.10411757875383,0.685572168028694,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0.139986421625363,0,0.503347818173209,0.725362142011344,0,0,0,0,2.63011399117477,1.05798195854407,1.26766280701236,0.338844532069132,0,0,0,0,0,0,1.55534418462716,2.70011876663381,2.10324961351382,0.571301968807607,1.32521124570968,1.71487118900936,2.20444583341944,0.919218786610021,1.10115880999389,0.127687338085188,0.153606533256243,3.16527090552465,3.56801810049398,2.6045668527838,0.558365998002762,0,0.45839474333043,2.35702868378934,0.854230084794618,2.05039390407831,0.075726193333184,0.0755715601067855,0.289864488701678,0,0,0,0,0,0.280888840263504,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0.148442139064825,0,0,0,0,0.117588707135705,0.125666591329675,0,0,0,0.161766849947409,0,0.484875253135222,0,3.51336956413857,15.7085030110091,0,0,0,0,0,0.915001205637253,0.753926112677186,0.173824320192276,0.511430914660661,0,0.162241263067758,0.203678727700633,0.248813941220186,0.252722758433675,0,0.260240885925407,0.919608417733892,0.540186389416048,0.150704817835715,0.612328492361951,0.512454881139399,0.937017245597288,0,0.431135985865684,0.567318240503458,0.175951124163949,0.43839146485515,0,0,0.205782136407943,0.398068533636986,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0.116765342367169,0,0,0.0810688095458557,0,0,0,0.210289948564127,2.26390147234426,0,0,0.213288250535234,0,0.257734922644187,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0.114248512609729,0,0,0,0.140271639780637,0,0,0.156998727841375,0.246794327843601,0,0,0,0,0.202860121388503,0,0,0.287696137450811,0.162135226775035,0,0,0,0,0,0.538192240565737,0,0,0.189491411770485,0.325929952884052,0.509235257325564,0,0,0,0.195133647857799,0.157635144106191,0,0,0,0,0,0,0,0,0,0,0.234423373184406,0,0,0,0,0.215423397732799,0,0,0.283076530788832,0,0,0,0,0.141940085208269,0.178065603667255,0.162886959353576,0,0,0.242780636154981,0.302323556964751,0,0,0,0,0,0,0.316036757935816,0,0,0,0.36012218806262,0.388076051348264,0,0.532020700926821,0.535106452806212,0,0.304464949114599,0,0,0,0,0,0.120625849856312,0.358117032009409,0,0,0,0.170870880797853,0,0,0.188368457004691,0.136694227721025,0,0,0,0,0,0.158167996790568,0,0,0,0,0,0,0,0,0,0,0.598066184175915,0.496375471371293,0.388902376688095,0,0.506868376472335,0.234714477291508,0.2604087696879,0,0,0,0,0.202725215290164,0,0,0,0.198681354781265,0.120195449519969,0,0.302899349844443,0.0762068066549998,0,0.0974578807397524,0.0962118416403295,0.233753804363138,0,0,0,0,0,0,0.36630324853453,0,0,0.564751842617067,0,0,0.343706364687375,0,0,0,0,0.453142408984205,0,1.66059756134683,1.19707462020309,0.512200817262403,0.486213434136588,0.209613162627982,0.919217542250071,0,0,0.64183841918363,0,0,0.565879024158229,0.468207537349412,0.192075457214608,0.229741875822453,0,0.115884325944855,0.38581844092741,0.412085900803307,0.147198920134397,0,0.887379030796687,0.476872379894642,0.290692833264657,0,0.0846146078916765,0,0.263069711437843,0.271608227691724,0,0.237270036248348,0.492522411877817,0.818462086339379,0.309873682371932,0.192906610981141,0.999242311751784,0.467863216890817,0,0,0,0 | |||
|short_description=p8@Sbk1 | |||
}} |
Revision as of 04:43, 4 August 2015
Short description: | p8@Sbk1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_Sbk1_5end |
Coexpression cluster: | MCL_coexpression_mm9:42 |
Association with transcript: | -175bp_to_ENSMUST00000056028, NM_145587, uc009jqw.1_5end |
EntrezGene: | 104175 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.11e-39 | 23 |
neuroblast (sensu Vertebrata) | 3.11e-39 | 23 |
neuron | 1.28e-26 | 33 |
neuronal stem cell | 1.28e-26 | 33 |
neuroblast | 1.28e-26 | 33 |
electrically signaling cell | 1.28e-26 | 33 |
electrically responsive cell | 3.79e-22 | 39 |
electrically active cell | 3.79e-22 | 39 |
neural cell | 7.40e-20 | 43 |
ectodermal cell | 2.38e-19 | 44 |
neurectodermal cell | 2.38e-19 | 44 |
neuron of cerebral cortex | 9.26e-18 | 6 |
striatum neuron | 2.69e-14 | 3 |
granule cell | 5.62e-13 | 3 |
embryonic cell | 3.19e-11 | 70 |
somatic stem cell | 2.66e-09 | 91 |
multi fate stem cell | 2.66e-09 | 91 |
stem cell | 1.48e-08 | 97 |