FFCP PHASE1:Mm9::chr8:86590331..86590349,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=6 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:86590331..86590349,- | |||
|description=CAGE_peak_at_chr8:86590331..86590349,- | |description=CAGE_peak_at_chr8:86590331..86590349,- | ||
|id=chr8:86590331..86590349,- | |id=chr8:86590331..86590349,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.30e-11,9;CL:0000789,1.30e-11,9;CL:0002420,1.30e-11,9;CL:0002419,1.30e-11,9;CL:0000790,1.30e-11,9;CL:0000838,5.05e-11,12;CL:0000624,3.63e-10,8;CL:0000542,4.61e-10,13;CL:0000051,4.61e-10,13;CL:0000084,2.69e-09,11;CL:0000827,2.69e-09,11;CL:0000988,4.22e-09,32;CL:0002032,4.22e-09,32;CL:0000037,4.22e-09,32;CL:0000837,4.22e-09,32;CL:0002031,5.80e-09,25;CL:0000738,2.35e-07,17;CL:0002087,2.35e-07,17 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!2.71e-11!29;UBERON:0002193!1.90e-10!48;UBERON:0003408!3.75e-10!24;UBERON:0006562!5.10e-10!24;UBERON:0001557!5.10e-10!24;UBERON:0001042!5.10e-10!24;UBERON:0008814!5.10e-10!24;UBERON:0009145!5.10e-10!24;UBERON:0002370!9.23e-10!23;UBERON:0000974!9.23e-10!23;UBERON:0004807!9.23e-10!23;UBERON:0005058!9.23e-10!23;UBERON:0003351!9.23e-10!23;UBERON:0009113!9.23e-10!23;UBERON:0003295!9.23e-10!23;UBERON:0009722!9.23e-10!23;UBERON:0005562!9.23e-10!23;UBERON:0007690!9.23e-10!23;UBERON:0002390!1.28e-09!45;UBERON:0003061!1.28e-09!45;UBERON:0001004!6.29e-08!42;UBERON:0000072!1.12e-07!27;UBERON:0000065!1.41e-07!41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.30e-19,23;UBERON:0000974,1.30e-19,23;UBERON:0004807,1.30e-19,23;UBERON:0005058,1.30e-19,23;UBERON:0003351,1.30e-19,23;UBERON:0009113,1.30e-19,23;UBERON:0003295,1.30e-19,23;UBERON:0009722,1.30e-19,23;UBERON:0005562,1.30e-19,23;UBERON:0007690,1.30e-19,23;UBERON:0006562,1.23e-18,24;UBERON:0003408,1.23e-18,24;UBERON:0001557,1.23e-18,24;UBERON:0001042,1.23e-18,24;UBERON:0008814,1.23e-18,24;UBERON:0009145,1.23e-18,24;UBERON:0004177,9.87e-17,29;UBERON:0005057,9.87e-17,29;UBERON:0002193,3.68e-16,48;UBERON:0002405,3.68e-16,48;UBERON:0000072,3.78e-16,27;UBERON:0002390,8.97e-16,45;UBERON:0003061,8.97e-16,45;UBERON:0000077,3.48e-13,35;UBERON:0007811,3.43e-11,36;UBERON:0000065,2.17e-09,41;UBERON:0002368,3.92e-09,60;UBERON:0001004,4.41e-09,42;UBERON:0000153,8.66e-09,43;UBERON:0000949,1.09e-08,72;UBERON:0000490,3.58e-08,66;UBERON:0003929,3.87e-08,55;UBERON:0002530,4.34e-08,65 | |||
|phase1_expression=0.320297694209588,0,0.454999239389536,0.90739263392049,1.50268718983904,0,0,13.4288256379239,0.422366166455,2.10658073689794,1.36974374580404,0.957265907944037,5.47842335779858,7.08105259593879,0.999329285446988,0.404950534779652,0,2.68142840554502,2.60517423850904,2.54633791078818,0.0850432901510698,0.794327609607082,0,0.47997726838022,0.22940928106717,0,0,0.215471232685889,0,0,0,0.635030673459631,0.61506478758457,0,0.577703239502549,0.166234645358492,0.408338712524738,2.51118978442145,0.7813353445238,4.18818995179039,45.8820560664191,3.41522742479223,0.485510353031154,0.251793635951155,0.101376931219515,0,0,0.436050312760893,0,0.388859798148567,0.139986421625363,0,2.51673909086605,2.17608642603403,1.00828139742739,0,0.286533439938757,0,0,0,0,0.338844532069132,0,0,0.988866362566974,0,0,0,0,0,0,0.285650984403804,0.220868540951614,0.122490799214954,0.191690942036473,0,0,0.127687338085188,0,0.131886287730194,0.0914876436024097,0,0.279182999001381,0.56276261003168,0.30559649555362,0,0,0.372798891650601,0,0.0755715601067855,0.869593466105033,0,0,0,0,0,0.140444420131752,0,0.259786004602869,0,0.563373679106722,0,0,0,0,0,0,0.34255163915718,1.8125651855302,0.29688427812965,0.173485326766136,0,0,0.60289056221049,0.23517741427141,0.125666591329675,0,0.433798070759735,0,0.161766849947409,0.441683036920787,0,0,0,0.41889341362691,0,0.838705871541442,0.599902730993408,1.14363204365758,0.299581278809645,0,0.125654352112864,0.347648640384553,0.255715457330331,0,0.324482526135515,0.101839363850316,0.248813941220186,0.252722758433675,0.210441855886474,0.260240885925407,0.229902104433473,0.540186389416048,0,0.136072998302656,0.12811372028485,0,0.258703370739016,0,0,0,0,0,0.696504333044333,0.205782136407943,0.398068533636986,0.702213187313235,0,1.42081749697796,0,0,0.180062061461015,0.23674473558521,0,0,0.465067889500816,0,0.350296027101508,0.16455984991348,0.32833492815819,0.162137619091711,0.292399974850665,0.439100230582101,0.134206418760372,0,0.308713837137853,0.330418782983798,0,0,0,0,0.201683524623343,0,0,0.474529061544512,0,0.251335208800269,0,0.58489226135736,0,0,0.199141273254367,0.189667900953082,0.228497025219458,1.1270773567308,0,0,0.140271639780637,0.126473074248515,0,0,0.123397163921801,0,0,0.196558995113203,0.224862112384854,0,0,0,0,0,0,1.43768206527355,0,0,0.252578877947112,0,0,0.184753190166605,0.37898282354097,0.325929952884052,0.169745085775188,0,0.335012514883631,0.714130922658041,0.195133647857799,0,0,0.478364305972461,0.327726629431476,0.690739927463582,0.433947175744535,0,0,0,0,0.481651769963376,0.117211686592203,0,0,0,0,0.215423397732799,0.238968797952552,0.222798674082394,0,0.404810701674894,0,0,0.321321316421807,0.141940085208269,0.534196811001766,0,0.164970122972535,1.32745138339963,0,0,0.188605079755898,0.590603785761546,0,0.258428293168221,0,0,0,0,1.03135543248187,1.70219802876894,0,0.258717367565509,0.214337035031592,0.177340233642274,1.07021290561242,0.164549020602121,1.2178597964584,0,0,0,0.32977250588296,0,0.120625849856312,0,0,0,0.370850604021019,1.02522528478712,0.206386867963223,0.370389054739423,0.376736914009382,0.820165366326151,0.686334519619568,1.35982743995084,1.39951452323658,1.10559979043539,0,0.316335993581135,0.609958401380546,0,0.209088296014469,0,0,0.0826534557253359,0.26175594198403,0,0.621339313086926,0,0,0,0.583353565032143,0.258319646955462,0.506868376472335,0,0.13020438484395,0.104859344425711,0,0.288030006257865,3.79213344753814,0.405450430580328,0.616265742988964,0.77952493786677,1.79026695667481,2.38417625737518,2.16351809135944,2.06765338044408,3.23092639834072,2.209997392995,2.21817607301049,3.31356794515158,3.75226182397285,5.02570679380746,0.453460767230423,0,0,0,0.19318959403219,0,0.36630324853453,0.214368379079066,0.501572104035363,0.564751842617067,0,0,0.171853182343688,0,0,0,0.900642406448441,0,0,0.103787347584177,0,0.341467211508268,0.486213434136588,0,0,0,0.206035057238894,0.320919209591815,0,0.25347929989024,0.377252682772152,0.187283014939765,0.320125762024346,0.0574354689556133,0,0,0,0,0,0,0,1.43061713968393,0.290692833264657,0,0.0846146078916765,0,0,0.407412341537585,0,0.355905054372522,0,0,0,0.192906610981141,0,0,0,0.765153328275374,0,0 | |phase1_expression=0.320297694209588,0,0.454999239389536,0.90739263392049,1.50268718983904,0,0,13.4288256379239,0.422366166455,2.10658073689794,1.36974374580404,0.957265907944037,5.47842335779858,7.08105259593879,0.999329285446988,0.404950534779652,0,2.68142840554502,2.60517423850904,2.54633791078818,0.0850432901510698,0.794327609607082,0,0.47997726838022,0.22940928106717,0,0,0.215471232685889,0,0,0,0.635030673459631,0.61506478758457,0,0.577703239502549,0.166234645358492,0.408338712524738,2.51118978442145,0.7813353445238,4.18818995179039,45.8820560664191,3.41522742479223,0.485510353031154,0.251793635951155,0.101376931219515,0,0,0.436050312760893,0,0.388859798148567,0.139986421625363,0,2.51673909086605,2.17608642603403,1.00828139742739,0,0.286533439938757,0,0,0,0,0.338844532069132,0,0,0.988866362566974,0,0,0,0,0,0,0.285650984403804,0.220868540951614,0.122490799214954,0.191690942036473,0,0,0.127687338085188,0,0.131886287730194,0.0914876436024097,0,0.279182999001381,0.56276261003168,0.30559649555362,0,0,0.372798891650601,0,0.0755715601067855,0.869593466105033,0,0,0,0,0,0.140444420131752,0,0.259786004602869,0,0.563373679106722,0,0,0,0,0,0,0.34255163915718,1.8125651855302,0.29688427812965,0.173485326766136,0,0,0.60289056221049,0.23517741427141,0.125666591329675,0,0.433798070759735,0,0.161766849947409,0.441683036920787,0,0,0,0.41889341362691,0,0.838705871541442,0.599902730993408,1.14363204365758,0.299581278809645,0,0.125654352112864,0.347648640384553,0.255715457330331,0,0.324482526135515,0.101839363850316,0.248813941220186,0.252722758433675,0.210441855886474,0.260240885925407,0.229902104433473,0.540186389416048,0,0.136072998302656,0.12811372028485,0,0.258703370739016,0,0,0,0,0,0.696504333044333,0.205782136407943,0.398068533636986,0.702213187313235,0,1.42081749697796,0,0,0.180062061461015,0.23674473558521,0,0,0.465067889500816,0,0.350296027101508,0.16455984991348,0.32833492815819,0.162137619091711,0.292399974850665,0.439100230582101,0.134206418760372,0,0.308713837137853,0.330418782983798,0,0,0,0,0.201683524623343,0,0,0.474529061544512,0,0.251335208800269,0,0.58489226135736,0,0,0.199141273254367,0.189667900953082,0.228497025219458,1.1270773567308,0,0,0.140271639780637,0.126473074248515,0,0,0.123397163921801,0,0,0.196558995113203,0.224862112384854,0,0,0,0,0,0,1.43768206527355,0,0,0.252578877947112,0,0,0.184753190166605,0.37898282354097,0.325929952884052,0.169745085775188,0,0.335012514883631,0.714130922658041,0.195133647857799,0,0,0.478364305972461,0.327726629431476,0.690739927463582,0.433947175744535,0,0,0,0,0.481651769963376,0.117211686592203,0,0,0,0,0.215423397732799,0.238968797952552,0.222798674082394,0,0.404810701674894,0,0,0.321321316421807,0.141940085208269,0.534196811001766,0,0.164970122972535,1.32745138339963,0,0,0.188605079755898,0.590603785761546,0,0.258428293168221,0,0,0,0,1.03135543248187,1.70219802876894,0,0.258717367565509,0.214337035031592,0.177340233642274,1.07021290561242,0.164549020602121,1.2178597964584,0,0,0,0.32977250588296,0,0.120625849856312,0,0,0,0.370850604021019,1.02522528478712,0.206386867963223,0.370389054739423,0.376736914009382,0.820165366326151,0.686334519619568,1.35982743995084,1.39951452323658,1.10559979043539,0,0.316335993581135,0.609958401380546,0,0.209088296014469,0,0,0.0826534557253359,0.26175594198403,0,0.621339313086926,0,0,0,0.583353565032143,0.258319646955462,0.506868376472335,0,0.13020438484395,0.104859344425711,0,0.288030006257865,3.79213344753814,0.405450430580328,0.616265742988964,0.77952493786677,1.79026695667481,2.38417625737518,2.16351809135944,2.06765338044408,3.23092639834072,2.209997392995,2.21817607301049,3.31356794515158,3.75226182397285,5.02570679380746,0.453460767230423,0,0,0,0.19318959403219,0,0.36630324853453,0.214368379079066,0.501572104035363,0.564751842617067,0,0,0.171853182343688,0,0,0,0.900642406448441,0,0,0.103787347584177,0,0.341467211508268,0.486213434136588,0,0,0,0.206035057238894,0.320919209591815,0,0.25347929989024,0.377252682772152,0.187283014939765,0.320125762024346,0.0574354689556133,0,0,0,0,0,0,0,1.43061713968393,0.290692833264657,0,0.0846146078916765,0,0,0.407412341537585,0,0.355905054372522,0,0,0,0.192906610981141,0,0,0,0.765153328275374,0,0 | ||
|short_description=p@chr8:86590331..86590349,- | |short_description=p@chr8:86590331..86590349,- | ||
}} | }} |
Latest revision as of 05:19, 4 August 2015
Short description: | p@chr8:86590331..86590349, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr8:86590331..86590349, - |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.30e-11 | 9 |
alpha-beta T cell | 1.30e-11 | 9 |
immature T cell | 1.30e-11 | 9 |
mature T cell | 1.30e-11 | 9 |
immature alpha-beta T cell | 1.30e-11 | 9 |
lymphoid lineage restricted progenitor cell | 5.05e-11 | 12 |
CD4-positive, alpha-beta T cell | 3.63e-10 | 8 |
lymphocyte | 4.61e-10 | 13 |
common lymphoid progenitor | 4.61e-10 | 13 |
T cell | 2.69e-09 | 11 |
pro-T cell | 2.69e-09 | 11 |
hematopoietic cell | 4.22e-09 | 32 |
hematopoietic oligopotent progenitor cell | 4.22e-09 | 32 |
hematopoietic stem cell | 4.22e-09 | 32 |
hematopoietic multipotent progenitor cell | 4.22e-09 | 32 |
hematopoietic lineage restricted progenitor cell | 5.80e-09 | 25 |
leukocyte | 2.35e-07 | 17 |
nongranular leukocyte | 2.35e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
thymus | 1.30e-19 | 23 |
neck | 1.30e-19 | 23 |
respiratory system epithelium | 1.30e-19 | 23 |
hemolymphoid system gland | 1.30e-19 | 23 |
pharyngeal epithelium | 1.30e-19 | 23 |
thymic region | 1.30e-19 | 23 |
pharyngeal gland | 1.30e-19 | 23 |
entire pharyngeal arch endoderm | 1.30e-19 | 23 |
thymus primordium | 1.30e-19 | 23 |
early pharyngeal endoderm | 1.30e-19 | 23 |
pharynx | 1.23e-18 | 24 |
gland of gut | 1.23e-18 | 24 |
upper respiratory tract | 1.23e-18 | 24 |
chordate pharynx | 1.23e-18 | 24 |
pharyngeal arch system | 1.23e-18 | 24 |
pharyngeal region of foregut | 1.23e-18 | 24 |
hemopoietic organ | 9.87e-17 | 29 |
immune organ | 9.87e-17 | 29 |
hemolymphoid system | 3.68e-16 | 48 |
immune system | 3.68e-16 | 48 |
segment of respiratory tract | 3.78e-16 | 27 |
hematopoietic system | 8.97e-16 | 45 |
blood island | 8.97e-16 | 45 |
mixed endoderm/mesoderm-derived structure | 3.48e-13 | 35 |
craniocervical region | 3.43e-11 | 36 |
respiratory tract | 2.17e-09 | 41 |
endocrine gland | 3.92e-09 | 60 |
respiratory system | 4.41e-09 | 42 |
anterior region of body | 8.66e-09 | 43 |
endocrine system | 1.09e-08 | 72 |
unilaminar epithelium | 3.58e-08 | 66 |
gut epithelium | 3.87e-08 | 55 |
gland | 4.34e-08 | 65 |