FFCP PHASE1:Mm9::chr10:22021585..22021609,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=36 | |MCL_coexpression_id=36 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:22021585..22021609,+ | |||
|description=CAGE_peak_at_chr10:22021585..22021609,+ | |description=CAGE_peak_at_chr10:22021585..22021609,+ | ||
|id=chr10:22021585..22021609,+ | |id=chr10:22021585..22021609,+ | ||
|ontology_enrichment_celltype=CL:0000838!3.32e-12!12;CL:0000988!5.71e-12!32;CL:0002032!5.71e-12!32;CL:0000037!5.71e-12!32;CL:0000566!5.71e-12!32;CL:0000837!5.71e-12!32;CL:0000791!2.43e-11!9;CL:0000789!2.43e-11!9;CL:0002420!2.43e-11!9;CL:0002419!2.43e-11!9;CL:0000790!2.43e-11!9;CL:0000084!5.09e-11!11;CL:0000827!5.09e-11!11;CL:0000542!5.11e-11!13;CL:0000051!5.11e-11!13;CL:0002031!1.04e-10!25;CL:0000624!4.57e-10!8;CL:0000738!1.78e-09!17;CL:0002087!1.78e-09!17;CL:0002320!2.00e-07!46;CL:0000134!2.00e-07!46;CL:0000893!2.17e-07!6;CL:0002489!2.17e-07!6;CL:0000898!2.17e-07!6;CL:0000809!2.17e-07!6;CL:0000810!2.17e-07!6;CL:0000895!2.17e-07!6;CL:0000808!2.17e-07!6;CL:0000894!2.17e-07!6;CL:0000806!2.17e-07!6;CL:0000807!2.17e-07!6;CL:0000805!2.17e-07!6;CL:0002425!2.17e-07!6;CL:0002436!2.17e-07!6;CL:0002427!2.17e-07!6;CL:0002428!2.17e-07!6;CL:0002429!2.17e-07!6;CL:0002433!2.17e-07!6;CL:0002431!2.17e-07!6;CL:0002432!2.17e-07!6 | |ontology_enrichment_celltype=CL:0000838!3.32e-12!12;CL:0000988!5.71e-12!32;CL:0002032!5.71e-12!32;CL:0000037!5.71e-12!32;CL:0000566!5.71e-12!32;CL:0000837!5.71e-12!32;CL:0000791!2.43e-11!9;CL:0000789!2.43e-11!9;CL:0002420!2.43e-11!9;CL:0002419!2.43e-11!9;CL:0000790!2.43e-11!9;CL:0000084!5.09e-11!11;CL:0000827!5.09e-11!11;CL:0000542!5.11e-11!13;CL:0000051!5.11e-11!13;CL:0002031!1.04e-10!25;CL:0000624!4.57e-10!8;CL:0000738!1.78e-09!17;CL:0002087!1.78e-09!17;CL:0002320!2.00e-07!46;CL:0000134!2.00e-07!46;CL:0000893!2.17e-07!6;CL:0002489!2.17e-07!6;CL:0000898!2.17e-07!6;CL:0000809!2.17e-07!6;CL:0000810!2.17e-07!6;CL:0000895!2.17e-07!6;CL:0000808!2.17e-07!6;CL:0000894!2.17e-07!6;CL:0000806!2.17e-07!6;CL:0000807!2.17e-07!6;CL:0000805!2.17e-07!6;CL:0002425!2.17e-07!6;CL:0002436!2.17e-07!6;CL:0002427!2.17e-07!6;CL:0002428!2.17e-07!6;CL:0002429!2.17e-07!6;CL:0002433!2.17e-07!6;CL:0002431!2.17e-07!6;CL:0002432!2.17e-07!6 | ||
|ontology_enrichment_celltype_v019_2=CL:0002031,1.03e-16,25;CL:0000988,2.38e-15,32;CL:0002032,2.38e-15,32;CL:0000037,2.38e-15,32;CL:0000837,2.38e-15,32;CL:0000838,2.59e-13,12;CL:0000791,8.93e-13,9;CL:0000789,8.93e-13,9;CL:0002420,8.93e-13,9;CL:0002419,8.93e-13,9;CL:0000790,8.93e-13,9;CL:0000738,1.63e-12,17;CL:0002087,1.63e-12,17;CL:0000542,2.98e-12,13;CL:0000051,2.98e-12,13;CL:0000084,2.03e-10,11;CL:0000827,2.03e-10,11;CL:0002320,3.77e-10,46;CL:0000134,3.77e-10,46;CL:0000624,1.57e-09,8;CL:0000219,2.19e-08,54;CL:0000553,3.07e-07,6;CL:0000556,3.07e-07,6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.25e-21!48;UBERON:0002390!3.80e-20!45;UBERON:0003061!3.80e-20!45;UBERON:0004177!7.44e-20!29;UBERON:0006562!4.85e-17!24;UBERON:0001557!4.85e-17!24;UBERON:0001042!4.85e-17!24;UBERON:0008814!4.85e-17!24;UBERON:0009145!4.85e-17!24;UBERON:0002370!2.87e-16!23;UBERON:0000974!2.87e-16!23;UBERON:0004807!2.87e-16!23;UBERON:0005058!2.87e-16!23;UBERON:0003351!2.87e-16!23;UBERON:0009113!2.87e-16!23;UBERON:0003295!2.87e-16!23;UBERON:0009722!2.87e-16!23;UBERON:0005562!2.87e-16!23;UBERON:0007690!2.87e-16!23;UBERON:0003408!2.45e-15!24;UBERON:0000072!1.92e-14!27;UBERON:0002405!1.57e-12!70;UBERON:0000065!1.58e-11!41;UBERON:0001004!4.38e-11!42;UBERON:0003081!3.56e-10!88;UBERON:0000063!9.18e-10!35;UBERON:0005057!4.89e-09!51;UBERON:0002384!2.00e-07!46 | |ontology_enrichment_uberon=UBERON:0002193!1.25e-21!48;UBERON:0002390!3.80e-20!45;UBERON:0003061!3.80e-20!45;UBERON:0004177!7.44e-20!29;UBERON:0006562!4.85e-17!24;UBERON:0001557!4.85e-17!24;UBERON:0001042!4.85e-17!24;UBERON:0008814!4.85e-17!24;UBERON:0009145!4.85e-17!24;UBERON:0002370!2.87e-16!23;UBERON:0000974!2.87e-16!23;UBERON:0004807!2.87e-16!23;UBERON:0005058!2.87e-16!23;UBERON:0003351!2.87e-16!23;UBERON:0009113!2.87e-16!23;UBERON:0003295!2.87e-16!23;UBERON:0009722!2.87e-16!23;UBERON:0005562!2.87e-16!23;UBERON:0007690!2.87e-16!23;UBERON:0003408!2.45e-15!24;UBERON:0000072!1.92e-14!27;UBERON:0002405!1.57e-12!70;UBERON:0000065!1.58e-11!41;UBERON:0001004!4.38e-11!42;UBERON:0003081!3.56e-10!88;UBERON:0000063!9.18e-10!35;UBERON:0005057!4.89e-09!51;UBERON:0002384!2.00e-07!46 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.26e-13,48;UBERON:0002405,1.26e-13,48;UBERON:0002390,2.84e-12,45;UBERON:0003061,2.84e-12,45;UBERON:0002384,3.77e-10,46;UBERON:0002370,9.95e-09,23;UBERON:0000974,9.95e-09,23;UBERON:0004807,9.95e-09,23;UBERON:0005058,9.95e-09,23;UBERON:0003351,9.95e-09,23;UBERON:0009113,9.95e-09,23;UBERON:0003295,9.95e-09,23;UBERON:0009722,9.95e-09,23;UBERON:0005562,9.95e-09,23;UBERON:0007690,9.95e-09,23;UBERON:0004177,1.07e-08,29;UBERON:0005057,1.07e-08,29;UBERON:0006562,2.47e-08,24;UBERON:0003408,2.47e-08,24;UBERON:0001557,2.47e-08,24;UBERON:0001042,2.47e-08,24;UBERON:0008814,2.47e-08,24;UBERON:0009145,2.47e-08,24;UBERON:0000072,2.54e-07,27;UBERON:0000077,4.94e-07,35 | |||
|phase1_expression=0,0,0,0,0,0,0,6.19791952519566,0.985521055061667,1.40438715793196,0.34243593645101,0.0797721589953364,0.513602189793617,3.14713448708391,0,0.404950534779652,0,1.26184866143295,1.64537320326887,3.39511721438424,0.0850432901510698,0.695036658406197,0,0.47997726838022,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67412652294763,0.7813353445238,0.523523743973798,0.588231488031014,2.04913645487534,0.971020706062307,0,0,0,0,0,0,0,0,0,1.51004345451963,2.17608642603403,2.01656279485478,0,0,0,0,0,0,0,0,0.449949858640699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,5.95557132388495,0.29688427812965,0,0,0,0.150722640552623,0,0,0,0.289198713839823,0,0,0.441683036920787,0.484875253135222,0,0,0,0,0.11981512450592,1.19980546198682,0.381210681219194,0,0,0,0,0,0,0,0,0.248813941220186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284163499395593,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0.554259570499814,0,0,0,0,0.167506257441816,0,0,0,0,0,0.163863314715738,0.345369963731791,0,0,2.17562273527484,0,0.275936746304732,0,0,0,0,0,0,0.215423397732799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.363533729477506,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0.161464426695906,0,0,0,0,0,1.19609616558497,0.412773735926445,0,0.188368457004691,0.27338845544205,0.457556346413045,0.169978429993855,0,0,0,0,0,0,0.209088296014469,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0.632022241256357,0,0.205421914329655,0.129920822977795,0.716106782669926,0.993406773906324,0.360586348559907,0.590758108698309,2.01932899896295,0.457240839929999,1.20991422164209,1.55932609183604,1.82802499116626,1.75315353272353,0.226730383615211,0,0,0,0,0.187682475451182,0,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187283014939765,0,0,0,0,0,0,0.147198920134397,0,0,0,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,6.19791952519566,0.985521055061667,1.40438715793196,0.34243593645101,0.0797721589953364,0.513602189793617,3.14713448708391,0,0.404950534779652,0,1.26184866143295,1.64537320326887,3.39511721438424,0.0850432901510698,0.695036658406197,0,0.47997726838022,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67412652294763,0.7813353445238,0.523523743973798,0.588231488031014,2.04913645487534,0.971020706062307,0,0,0,0,0,0,0,0,0,1.51004345451963,2.17608642603403,2.01656279485478,0,0,0,0,0,0,0,0,0.449949858640699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,5.95557132388495,0.29688427812965,0,0,0,0.150722640552623,0,0,0,0.289198713839823,0,0,0.441683036920787,0.484875253135222,0,0,0,0,0.11981512450592,1.19980546198682,0.381210681219194,0,0,0,0,0,0,0,0,0.248813941220186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284163499395593,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0.554259570499814,0,0,0,0,0.167506257441816,0,0,0,0,0,0.163863314715738,0.345369963731791,0,0,2.17562273527484,0,0.275936746304732,0,0,0,0,0,0,0.215423397732799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.363533729477506,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0.161464426695906,0,0,0,0,0,1.19609616558497,0.412773735926445,0,0.188368457004691,0.27338845544205,0.457556346413045,0.169978429993855,0,0,0,0,0,0,0.209088296014469,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0.632022241256357,0,0.205421914329655,0.129920822977795,0.716106782669926,0.993406773906324,0.360586348559907,0.590758108698309,2.01932899896295,0.457240839929999,1.20991422164209,1.55932609183604,1.82802499116626,1.75315353272353,0.226730383615211,0,0,0,0,0.187682475451182,0,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187283014939765,0,0,0,0,0,0,0.147198920134397,0,0,0,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr10:22021585..22021609,+ | |short_description=p@chr10:22021585..22021609,+ | ||
}} | }} |
Latest revision as of 06:03, 4 August 2015
Short description: | p@chr10:22021585..22021609, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:22021585..22021609, + |
Coexpression cluster: | MCL_coexpression_mm9:36 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic lineage restricted progenitor cell | 1.03e-16 | 25 |
hematopoietic cell | 2.38e-15 | 32 |
hematopoietic oligopotent progenitor cell | 2.38e-15 | 32 |
hematopoietic stem cell | 2.38e-15 | 32 |
hematopoietic multipotent progenitor cell | 2.38e-15 | 32 |
lymphoid lineage restricted progenitor cell | 2.59e-13 | 12 |
mature alpha-beta T cell | 8.93e-13 | 9 |
alpha-beta T cell | 8.93e-13 | 9 |
immature T cell | 8.93e-13 | 9 |
mature T cell | 8.93e-13 | 9 |
immature alpha-beta T cell | 8.93e-13 | 9 |
leukocyte | 1.63e-12 | 17 |
nongranular leukocyte | 1.63e-12 | 17 |
lymphocyte | 2.98e-12 | 13 |
common lymphoid progenitor | 2.98e-12 | 13 |
T cell | 2.03e-10 | 11 |
pro-T cell | 2.03e-10 | 11 |
connective tissue cell | 3.77e-10 | 46 |
mesenchymal cell | 3.77e-10 | 46 |
CD4-positive, alpha-beta T cell | 1.57e-09 | 8 |
motile cell | 2.19e-08 | 54 |
megakaryocyte progenitor cell | 3.07e-07 | 6 |
megakaryocyte | 3.07e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.26e-13 | 48 |
immune system | 1.26e-13 | 48 |
hematopoietic system | 2.84e-12 | 45 |
blood island | 2.84e-12 | 45 |
connective tissue | 3.77e-10 | 46 |
thymus | 9.95e-09 | 23 |
neck | 9.95e-09 | 23 |
respiratory system epithelium | 9.95e-09 | 23 |
hemolymphoid system gland | 9.95e-09 | 23 |
pharyngeal epithelium | 9.95e-09 | 23 |
thymic region | 9.95e-09 | 23 |
pharyngeal gland | 9.95e-09 | 23 |
entire pharyngeal arch endoderm | 9.95e-09 | 23 |
thymus primordium | 9.95e-09 | 23 |
early pharyngeal endoderm | 9.95e-09 | 23 |
hemopoietic organ | 1.07e-08 | 29 |
immune organ | 1.07e-08 | 29 |
pharynx | 2.47e-08 | 24 |
gland of gut | 2.47e-08 | 24 |
upper respiratory tract | 2.47e-08 | 24 |
chordate pharynx | 2.47e-08 | 24 |
pharyngeal arch system | 2.47e-08 | 24 |
pharyngeal region of foregut | 2.47e-08 | 24 |
segment of respiratory tract | 2.54e-07 | 27 |
mixed endoderm/mesoderm-derived structure | 4.94e-07 | 35 |