FFCP PHASE1:Mm9::chr10:22026200..22026224,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=178 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:22026200..22026224,- | |||
|description=CAGE_peak_at_chr10:22026200..22026224,- | |description=CAGE_peak_at_chr10:22026200..22026224,- | ||
|id=chr10:22026200..22026224,- | |id=chr10:22026200..22026224,- | ||
|ontology_enrichment_celltype=CL:0002031!2.55e-17!25;CL:0000838!1.93e-15!12;CL:0000542!4.55e-14!13;CL:0000051!4.55e-14!13;CL:0000791!8.65e-14!9;CL:0000789!8.65e-14!9;CL:0002420!8.65e-14!9;CL:0002419!8.65e-14!9;CL:0000790!8.65e-14!9;CL:0000084!8.83e-14!11;CL:0000827!8.83e-14!11;CL:0000988!1.38e-12!32;CL:0002032!1.38e-12!32;CL:0000037!1.38e-12!32;CL:0000566!1.38e-12!32;CL:0000837!1.38e-12!32;CL:0000738!1.59e-12!17;CL:0002087!1.59e-12!17;CL:0000624!6.84e-12!8;CL:0002320!7.12e-10!46;CL:0000134!7.12e-10!46;CL:0000553!2.76e-08!6;CL:0000556!2.76e-08!6;CL:0000893!3.53e-08!6;CL:0002489!3.53e-08!6;CL:0000898!3.53e-08!6;CL:0000809!3.53e-08!6;CL:0000810!3.53e-08!6;CL:0000895!3.53e-08!6;CL:0000808!3.53e-08!6;CL:0000894!3.53e-08!6;CL:0000806!3.53e-08!6;CL:0000807!3.53e-08!6;CL:0000805!3.53e-08!6;CL:0002425!3.53e-08!6;CL:0002436!3.53e-08!6;CL:0002427!3.53e-08!6;CL:0002428!3.53e-08!6;CL:0002429!3.53e-08!6;CL:0002433!3.53e-08!6;CL:0002431!3.53e-08!6;CL:0002432!3.53e-08!6;CL:0000219!9.74e-08!54 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.24e-22,9;CL:0000789,1.24e-22,9;CL:0002420,1.24e-22,9;CL:0002419,1.24e-22,9;CL:0000790,1.24e-22,9;CL:0002031,4.03e-20,25;CL:0000084,1.51e-18,11;CL:0000827,1.51e-18,11;CL:0000838,5.16e-17,12;CL:0000738,6.53e-17,17;CL:0002087,6.53e-17,17;CL:0000624,1.39e-16,8;CL:0000542,1.03e-15,13;CL:0000051,1.03e-15,13;CL:0000988,1.26e-15,32;CL:0002032,1.26e-15,32;CL:0000037,1.26e-15,32;CL:0000837,1.26e-15,32;CL:0002320,1.02e-10,46;CL:0000134,1.02e-10,46;CL:0000815,9.82e-10,1;CL:0000792,9.82e-10,1;CL:0000625,1.73e-09,1;CL:0000219,4.78e-09,54 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.73e-27!48;UBERON:0002390!2.66e-25!45;UBERON:0003061!2.66e-25!45;UBERON:0004177!7.35e-22!29;UBERON:0002370!2.93e-18!23;UBERON:0000974!2.93e-18!23;UBERON:0004807!2.93e-18!23;UBERON:0005058!2.93e-18!23;UBERON:0003351!2.93e-18!23;UBERON:0009113!2.93e-18!23;UBERON:0003295!2.93e-18!23;UBERON:0009722!2.93e-18!23;UBERON:0005562!2.93e-18!23;UBERON:0007690!2.93e-18!23;UBERON:0002405!7.74e-18!70;UBERON:0006562!2.55e-17!24;UBERON:0003408!2.55e-17!24;UBERON:0001557!2.55e-17!24;UBERON:0001042!2.55e-17!24;UBERON:0008814!2.55e-17!24;UBERON:0009145!2.55e-17!24;UBERON:0000072!6.36e-15!27;UBERON:0003081!1.02e-14!88;UBERON:0005057!2.06e-11!51;UBERON:0000063!1.44e-10!35;UBERON:0002384!7.12e-10!46;UBERON:0000065!1.94e-08!41;UBERON:0001004!3.81e-08!42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.02e-10,46;UBERON:0002193,4.06e-10,48;UBERON:0002405,4.06e-10,48;UBERON:0000029,1.44e-09,1;UBERON:0001097,1.44e-09,1;UBERON:0003968,1.44e-09,1;UBERON:0001467,1.44e-09,1;UBERON:0002390,2.85e-08,45;UBERON:0003061,2.85e-08,45 | |||
|phase1_expression=0,0,0,0,0,0,0,10.4589891987677,0.422366166455,0.936258105287974,0,0.0797721589953364,1.71200729931206,9.09172185157573,0.333109761815663,0.202475267389826,0,1.73504190947031,2.33094537129756,0.84877930359606,0.17008658030214,0.397163804803541,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.671130424230945,1.45072428402269,2.68875039313971,0,0,0,0,0,0,0,0,0,0,0.7104801149461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0.259786004602869,0,0,0,0,0,0,0,0,0.11418387971906,3.10725460376606,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232533944750408,0,0,0,0,0,0,0,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08781136763742,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0.341741761595705,0,0.185194527369712,0,0.27338845544205,0.228778173206523,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25984164595559,0.179026695667481,0.79472541912506,0.600977247599844,0.443068581523732,0.706765149637033,0.457240839929999,1.00826185136841,0.487289403698762,1.25075394132428,0.350630706544707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192906610981141,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,10.4589891987677,0.422366166455,0.936258105287974,0,0.0797721589953364,1.71200729931206,9.09172185157573,0.333109761815663,0.202475267389826,0,1.73504190947031,2.33094537129756,0.84877930359606,0.17008658030214,0.397163804803541,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.671130424230945,1.45072428402269,2.68875039313971,0,0,0,0,0,0,0,0,0,0,0.7104801149461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0.259786004602869,0,0,0,0,0,0,0,0,0.11418387971906,3.10725460376606,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232533944750408,0,0,0,0,0,0,0,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08781136763742,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0.341741761595705,0,0.185194527369712,0,0.27338845544205,0.228778173206523,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25984164595559,0.179026695667481,0.79472541912506,0.600977247599844,0.443068581523732,0.706765149637033,0.457240839929999,1.00826185136841,0.487289403698762,1.25075394132428,0.350630706544707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192906610981141,0,0,0,0,0,0 | ||
|short_description=p@chr10:22026200..22026224,- | |short_description=p@chr10:22026200..22026224,- | ||
}} | }} |
Latest revision as of 06:08, 4 August 2015
Short description: | p@chr10:22026200..22026224, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:22026200..22026224, - |
Coexpression cluster: | MCL_coexpression_mm9:178 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.24e-22 | 9 |
alpha-beta T cell | 1.24e-22 | 9 |
immature T cell | 1.24e-22 | 9 |
mature T cell | 1.24e-22 | 9 |
immature alpha-beta T cell | 1.24e-22 | 9 |
hematopoietic lineage restricted progenitor cell | 4.03e-20 | 25 |
T cell | 1.51e-18 | 11 |
pro-T cell | 1.51e-18 | 11 |
lymphoid lineage restricted progenitor cell | 5.16e-17 | 12 |
leukocyte | 6.53e-17 | 17 |
nongranular leukocyte | 6.53e-17 | 17 |
CD4-positive, alpha-beta T cell | 1.39e-16 | 8 |
lymphocyte | 1.03e-15 | 13 |
common lymphoid progenitor | 1.03e-15 | 13 |
hematopoietic cell | 1.26e-15 | 32 |
hematopoietic oligopotent progenitor cell | 1.26e-15 | 32 |
hematopoietic stem cell | 1.26e-15 | 32 |
hematopoietic multipotent progenitor cell | 1.26e-15 | 32 |
connective tissue cell | 1.02e-10 | 46 |
mesenchymal cell | 1.02e-10 | 46 |
regulatory T cell | 9.82e-10 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 9.82e-10 | 1 |
CD8-positive, alpha-beta T cell | 1.73e-09 | 1 |
motile cell | 4.78e-09 | 54 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.02e-10 | 46 |
hemolymphoid system | 4.06e-10 | 48 |
immune system | 4.06e-10 | 48 |
lymph node | 1.44e-09 | 1 |
axillary lymph node | 1.44e-09 | 1 |
peripheral lymph node | 1.44e-09 | 1 |
shoulder | 1.44e-09 | 1 |
hematopoietic system | 2.85e-08 | 45 |
blood island | 2.85e-08 | 45 |