FFCP PHASE1:Mm9::chr11:86571381..86571413,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=6 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:86571381..86571413,+ | |||
|description=CAGE_peak_at_chr11:86571381..86571413,+ | |description=CAGE_peak_at_chr11:86571381..86571413,+ | ||
|id=chr11:86571381..86571413,+ | |id=chr11:86571381..86571413,+ | ||
|ontology_enrichment_celltype=CL:0000063!1.15e-10!66;CL:0000144!1.70e-09!121;CL:0000012!1.70e-09!121;CL:0002371!2.26e-08!118;CL:0000034!2.12e-07!97;CL:0000548!3.87e-07!115;CL:0000004!3.87e-07!115;CL:0000255!3.87e-07!115 | |ontology_enrichment_celltype=CL:0000063!1.15e-10!66;CL:0000144!1.70e-09!121;CL:0000012!1.70e-09!121;CL:0002371!2.26e-08!118;CL:0000034!2.12e-07!97;CL:0000548!3.87e-07!115;CL:0000004!3.87e-07!115;CL:0000255!3.87e-07!115 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.73e-12,9;CL:0002251,1.73e-12,9;CL:0000034,3.78e-11,97;CL:0000075,4.22e-10,7;CL:0000723,7.44e-10,91;CL:0000048,7.44e-10,91;CL:0002320,7.94e-10,46;CL:0000134,7.94e-10,46;CL:0000066,2.03e-09,25;CL:0000988,2.20e-09,32;CL:0002032,2.20e-09,32;CL:0000037,2.20e-09,32;CL:0000837,2.20e-09,32;CL:0000239,3.55e-09,6;CL:0000677,3.55e-09,6;CL:0000584,3.55e-09,6;CL:0000219,2.47e-08,54;CL:0002076,3.03e-08,15;CL:0000223,5.89e-07,20 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000485!2.17e-07!11 | |ontology_enrichment_uberon=UBERON:0000485!2.17e-07!11 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000485,4.15e-14,11;UBERON:0003350,1.73e-12,9;UBERON:0004808,1.73e-12,9;UBERON:0001277,1.73e-12,9;UBERON:0002384,7.94e-10,46;UBERON:0002204,5.49e-09,32;UBERON:0001242,6.08e-08,13;UBERON:0001262,6.08e-08,13;UBERON:0004786,6.08e-08,13;UBERON:0007524,7.25e-07,11;UBERON:0003077,7.25e-07,11;UBERON:0007285,7.25e-07,11 | |||
|phase1_expression=1.12104192973356,5.58360652222978,3.63999391511629,6.0492842261366,3.50627010962443,2.18243053485457,1.86890112476421,4.26106967357202,0.985521055061667,0,0.171217968225505,0,3.25281386869291,2.44777126773193,0,0.404950534779652,1.39912375625629,1.41957974411207,1.37114433605739,1.27316895539409,1.10556277196391,0.496454756004426,1.82839852397255,0.47997726838022,0.22940928106717,1.72269589234506,1.29228598847722,0.646413698057667,0.570070258369122,0.756090389279792,0.886922042621219,3.81018404075779,0.61506478758457,0,3.75507105676657,1.32987716286794,2.24586291888606,24.6933662134776,14.0640362014284,28.2702821745851,97.6464270131484,24.589637458504,29.1306211818692,1.00717454380462,1.62203089951223,1.83546752161682,1.56478268869608,0.872100625521786,0.659058548203415,0,0.279972843250725,0,1.67782606057736,2.17608642603403,1.34437519656986,0,0.573066879877513,0,0,1.05798195854407,0,1.69422266034566,0.889294796111139,1.7997994345628,1.97773272513395,1.4209602298922,0.898800331555214,0.384218305321555,0,0.270011876663381,0.630974884054146,0.571301968807607,0.441737081903227,0,0,0.919218786610021,0,0.510749352340751,0.921639199537461,0.527545150920775,0.182975287204819,0,0,1.12552522006336,0.45839474333043,0.294628585473668,0.427115042397309,0.186399445825301,0.151452386666368,0.0755715601067855,5.79728977403356,0.860423876981386,0,0.539703191637817,0,0.896053774194671,0.421333260395256,0.511290967734173,0,0.70667914902068,1.54927761754349,0,2.54805239706646,0,0.649473123033642,0.506719730950197,0,0.22836775943812,0.258937883647172,0.445326417194474,0.173485326766136,0.913396434936424,0.922461989024234,1.20578112442098,0.705532242814229,0.376999773989026,0.247194967734374,0.578397427679647,0,0,0.883366073841574,0.484875253135222,0,0.292780797011547,1.04723353406728,0.255457055208591,1.31796636956512,4.79922184794726,1.90605340609597,0.299581278809645,0.457500602818626,0.376963056338593,0,0.767146371990992,0.20778804455956,1.1356888414743,0.611036183101898,0.373220911830279,0.252722758433675,0.841767423545896,0.130120442962704,0,0.540186389416048,0.452114453507145,0.408218994907967,0.12811372028485,0.562210347358373,0,0.215567992932842,0,0.351902248327898,0.219195732427575,0.278047249225598,1.39300866608867,0.205782136407943,0.398068533636986,2.1066395619397,3.60287069960601,0.852490498186778,0,0.234526059981096,0.540186184383045,0,0.196764231747404,0.154267112887378,0.232533944750408,0.804820204198858,0.583826711835847,0,0,0.405344047729279,0.438599962275997,0,0.402619256281115,0.630869845692382,0.411618449517138,0.330418782983798,0.528901133327089,0,0,0.257734922644187,0.201683524623343,0,0,0,0,0.251335208800269,0.795825888164603,0.58489226135736,1.79763881730844,0.216138049874694,0.398282546508734,0.758671603812327,0.228497025219458,0,0.203651327845314,0.387904974335251,0.631222379012867,0.379419222745544,0.590440591918409,0.156998727841375,0.863780147452604,0.296452627087149,0.500535317148282,0,0,0.608580364165509,0.482354319504834,0.50925170356284,0.575392274901621,1.13494658742525,1.09824565275233,2.87536413054709,0.372140947668503,0.936113019343682,0.505157755894224,0.358794827043824,0,0.184753190166605,0,0,0,0.234690248288502,0.335012514883631,0,0.585400943573396,0.472905432318573,0,0.797273843287435,0.491589944147214,0.863424909329478,0.433947175744535,0,1.08781136763742,0.491764273019036,0,0.321101179975584,0.820481806145422,0.163934945376675,0.757412781613119,1.26203287766503,0.390438744296638,0.430846795465598,0.716906393857656,0.668396022247182,0.566153061577665,0.809621403349789,0.292255857911312,0.395287777946524,0.642642632843614,0.567760340833074,0.534196811001766,0.162886959353576,0.329940245945071,0,0,0.302323556964751,0.188605079755898,0.590603785761546,0,0.516856586336442,0,0.712994756769443,0,1.05418608574999,1.03135543248187,1.02131881726136,0,0.258717367565509,0.857348140126369,0.709360934569094,0.535106452806212,1.15184314421485,1.8267896946876,0.23467170806371,0.63549621259146,0.220528398054962,0.32977250588296,0.484393280087717,0.663442174209714,0,0,0.291480836629851,0.556275906031529,0.341741761595705,0.412773735926445,0.185194527369712,0,0.410082683163076,0,1.18984900995699,2.93898049879682,2.9021994498929,0,0.474503990371703,0.203319467126849,0.216010681643603,0.209088296014469,0.436725127492355,0.404593039154462,0.330613822901344,0,0.648074866458964,0.621339313086926,1.12738587736838,0.299033092087958,0.330916980914195,0.194451188344048,0.516639293910924,0.675824501963113,0.821500670520278,0.911430693907651,0.419437377702843,1.93267296660805,4.60848010012585,0,0,0.205421914329655,0.129920822977795,0.179026695667481,0,0.120195449519969,0.147689527174577,0.201932899896295,0.15241361331,0.100826185136841,0.292373642219257,0.384847366561318,0.233753804363138,0.226730383615211,0.443971906748129,0.269141569828427,0.671538465456314,0.579568782096571,0,0.183151624267265,0,1.50471631210609,0.564751842617067,0.460325236507177,0,0.515559547031063,0,0,0.675022500231806,0,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| |phase1_expression=1.12104192973356,5.58360652222978,3.63999391511629,6.0492842261366,3.50627010962443,2.18243053485457,1.86890112476421,4.26106967357202,0.985521055061667,0,0.171217968225505,0,3.25281386869291,2.44777126773193,0,0.404950534779652,1.39912375625629,1.41957974411207,1.37114433605739,1.27316895539409,1.10556277196391,0.496454756004426,1.82839852397255,0.47997726838022,0.22940928106717,1.72269589234506,1.29228598847722,0.646413698057667,0.570070258369122,0.756090389279792,0.886922042621219,3.81018404075779,0.61506478758457,0,3.75507105676657,1.32987716286794,2.24586291888606,24.6933662134776,14.0640362014284,28.2702821745851,97.6464270131484,24.589637458504,29.1306211818692,1.00717454380462,1.62203089951223,1.83546752161682,1.56478268869608,0.872100625521786,0.659058548203415,0,0.279972843250725,0,1.67782606057736,2.17608642603403,1.34437519656986,0,0.573066879877513,0,0,1.05798195854407,0,1.69422266034566,0.889294796111139,1.7997994345628,1.97773272513395,1.4209602298922,0.898800331555214,0.384218305321555,0,0.270011876663381,0.630974884054146,0.571301968807607,0.441737081903227,0,0,0.919218786610021,0,0.510749352340751,0.921639199537461,0.527545150920775,0.182975287204819,0,0,1.12552522006336,0.45839474333043,0.294628585473668,0.427115042397309,0.186399445825301,0.151452386666368,0.0755715601067855,5.79728977403356,0.860423876981386,0,0.539703191637817,0,0.896053774194671,0.421333260395256,0.511290967734173,0,0.70667914902068,1.54927761754349,0,2.54805239706646,0,0.649473123033642,0.506719730950197,0,0.22836775943812,0.258937883647172,0.445326417194474,0.173485326766136,0.913396434936424,0.922461989024234,1.20578112442098,0.705532242814229,0.376999773989026,0.247194967734374,0.578397427679647,0,0,0.883366073841574,0.484875253135222,0,0.292780797011547,1.04723353406728,0.255457055208591,1.31796636956512,4.79922184794726,1.90605340609597,0.299581278809645,0.457500602818626,0.376963056338593,0,0.767146371990992,0.20778804455956,1.1356888414743,0.611036183101898,0.373220911830279,0.252722758433675,0.841767423545896,0.130120442962704,0,0.540186389416048,0.452114453507145,0.408218994907967,0.12811372028485,0.562210347358373,0,0.215567992932842,0,0.351902248327898,0.219195732427575,0.278047249225598,1.39300866608867,0.205782136407943,0.398068533636986,2.1066395619397,3.60287069960601,0.852490498186778,0,0.234526059981096,0.540186184383045,0,0.196764231747404,0.154267112887378,0.232533944750408,0.804820204198858,0.583826711835847,0,0,0.405344047729279,0.438599962275997,0,0.402619256281115,0.630869845692382,0.411618449517138,0.330418782983798,0.528901133327089,0,0,0.257734922644187,0.201683524623343,0,0,0,0,0.251335208800269,0.795825888164603,0.58489226135736,1.79763881730844,0.216138049874694,0.398282546508734,0.758671603812327,0.228497025219458,0,0.203651327845314,0.387904974335251,0.631222379012867,0.379419222745544,0.590440591918409,0.156998727841375,0.863780147452604,0.296452627087149,0.500535317148282,0,0,0.608580364165509,0.482354319504834,0.50925170356284,0.575392274901621,1.13494658742525,1.09824565275233,2.87536413054709,0.372140947668503,0.936113019343682,0.505157755894224,0.358794827043824,0,0.184753190166605,0,0,0,0.234690248288502,0.335012514883631,0,0.585400943573396,0.472905432318573,0,0.797273843287435,0.491589944147214,0.863424909329478,0.433947175744535,0,1.08781136763742,0.491764273019036,0,0.321101179975584,0.820481806145422,0.163934945376675,0.757412781613119,1.26203287766503,0.390438744296638,0.430846795465598,0.716906393857656,0.668396022247182,0.566153061577665,0.809621403349789,0.292255857911312,0.395287777946524,0.642642632843614,0.567760340833074,0.534196811001766,0.162886959353576,0.329940245945071,0,0,0.302323556964751,0.188605079755898,0.590603785761546,0,0.516856586336442,0,0.712994756769443,0,1.05418608574999,1.03135543248187,1.02131881726136,0,0.258717367565509,0.857348140126369,0.709360934569094,0.535106452806212,1.15184314421485,1.8267896946876,0.23467170806371,0.63549621259146,0.220528398054962,0.32977250588296,0.484393280087717,0.663442174209714,0,0,0.291480836629851,0.556275906031529,0.341741761595705,0.412773735926445,0.185194527369712,0,0.410082683163076,0,1.18984900995699,2.93898049879682,2.9021994498929,0,0.474503990371703,0.203319467126849,0.216010681643603,0.209088296014469,0.436725127492355,0.404593039154462,0.330613822901344,0,0.648074866458964,0.621339313086926,1.12738587736838,0.299033092087958,0.330916980914195,0.194451188344048,0.516639293910924,0.675824501963113,0.821500670520278,0.911430693907651,0.419437377702843,1.93267296660805,4.60848010012585,0,0,0.205421914329655,0.129920822977795,0.179026695667481,0,0.120195449519969,0.147689527174577,0.201932899896295,0.15241361331,0.100826185136841,0.292373642219257,0.384847366561318,0.233753804363138,0.226730383615211,0.443971906748129,0.269141569828427,0.671538465456314,0.579568782096571,0,0.183151624267265,0,1.50471631210609,0.564751842617067,0.460325236507177,0,0.515559547031063,0,0,0.675022500231806,0,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| ||
|short_description=p@chr11:86571381..86571413,+ | |short_description=p@chr11:86571381..86571413,+ | ||
}} | }} |
Latest revision as of 06:27, 4 August 2015
Short description: | p@chr11:86571381..86571413, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:86571381..86571413, + |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.73e-12 | 9 |
epithelial cell of alimentary canal | 1.73e-12 | 9 |
stem cell | 3.78e-11 | 97 |
columnar/cuboidal epithelial cell | 4.22e-10 | 7 |
somatic stem cell | 7.44e-10 | 91 |
multi fate stem cell | 7.44e-10 | 91 |
connective tissue cell | 7.94e-10 | 46 |
mesenchymal cell | 7.94e-10 | 46 |
epithelial cell | 2.03e-09 | 25 |
hematopoietic cell | 2.20e-09 | 32 |
hematopoietic oligopotent progenitor cell | 2.20e-09 | 32 |
hematopoietic stem cell | 2.20e-09 | 32 |
hematopoietic multipotent progenitor cell | 2.20e-09 | 32 |
brush border epithelial cell | 3.55e-09 | 6 |
gut absorptive cell | 3.55e-09 | 6 |
enterocyte | 3.55e-09 | 6 |
motile cell | 2.47e-08 | 54 |
endo-epithelial cell | 3.03e-08 | 15 |
endodermal cell | 5.89e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
simple columnar epithelium | 4.15e-14 | 11 |
epithelium of mucosa | 1.73e-12 | 9 |
gastrointestinal system epithelium | 1.73e-12 | 9 |
intestinal epithelium | 1.73e-12 | 9 |
connective tissue | 7.94e-10 | 46 |
musculoskeletal system | 5.49e-09 | 32 |
intestinal mucosa | 6.08e-08 | 13 |
wall of intestine | 6.08e-08 | 13 |
gastrointestinal system mucosa | 6.08e-08 | 13 |
dense mesenchyme tissue | 7.25e-07 | 11 |
paraxial mesoderm | 7.25e-07 | 11 |
presumptive paraxial mesoderm | 7.25e-07 | 11 |