FFCP PHASE1:Mm9::chr10:32803009..32803020,+: Difference between revisions
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{{FFCP|EntrezGene=76757|HGNC=|MCL_coexpression_id=45|UniProt=E9Q9U7,E9PWI1,E9Q9K5,Q9CV36,Q8VIN9,Q8VIN8,Q8VIN7|association_with_transcript=-268bp_to_ENSMUST00000050626,ENSMUST00000075979,ENSMUST00000095762,NM_029726,uc007etz.2,uc007eua.2,uc007eub.2,uc011xcl.1_5end|description=CAGE_peak_5_at_Trdn_5end|id=chr10:32803009..32803020,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007100!3.12e-18!18;UBERON:0000948!3.12e-18!18;UBERON:0005498!3.12e-18!18;UBERON:0004140!3.12e-18!18;UBERON:0009881!3.12e-18!18;UBERON:0004141!3.12e-18!18;UBERON:0003084!3.12e-18!18;UBERON:0007005!3.12e-18!18;UBERON:0004139!3.12e-18!18;UBERON:0004291!3.12e-18!18;UBERON:0004535!3.15e-13!23;UBERON:0001009!3.15e-13!23;UBERON:0004872!5.47e-09!33;UBERON:0003103!1.43e-08!43|ontology_enrichment_uberon_v019_2=UBERON:0007100,6.00e-39,18;UBERON:0000948,6.00e-39,18;UBERON:0005498,6.00e-39,18;UBERON:0004140,6.00e-39,18;UBERON:0009881,6.00e-39,18;UBERON:0004141,6.00e-39,18;UBERON:0003084,6.00e-39,18;UBERON:0007005,6.00e-39,18;UBERON:0004139,6.00e-39,18;UBERON:0004291,6.00e-39,18;UBERON:0004535,1.96e-30,23;UBERON:0001009,1.96e-30,23;UBERON:0004872,4.00e-21,33;UBERON:0003103,3.98e-16,43;UBERON:0003914,1.02e-14,47;UBERON:0001374,4.59e-10,1;UBERON:0004252,4.59e-10,1;UBERON:0003663,4.59e-10,1;UBERON:0005090,4.59e-10,1;UBERON:0001630,4.59e-10,1;UBERON:0003661,4.59e-10,1;UBERON:0010890,4.59e-10,1;UBERON:0001383,4.59e-10,1;UBERON:0003081,1.27e-09,87;UBERON:0010314,2.94e-07,92;UBERON:0000926,8.41e-07,120;UBERON:0004120,8.41e-07,120;UBERON:0006603,8.41e-07,120|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0.970601099684455,0.662524555381181,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248813941220186,0,0,0,0,0.180062129805349,0,0,0.12811372028485,0,0.258703370739016,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0.828503090142008,1.17263029990548,1.2604344302271,1.42046841351126,2.55793501271625,2.31400669331067,2.79040733700489,1.87791380979733,1.63471479314037,0.658239399653922,1.14917224855367,0.648550476366846,0.730999937126662,0,0.805238512562231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0,0,0.169745085775188,0,0,0.238043640886014,0.195133647857799,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0,1.51482556322624,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0.178065603667255,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0.0603129249281559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.576060012515731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680191150845634,0,0,0,0.19318959403219,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0.729320151204882,0,0,0.222246727801615,0.206035057238894,0.962757628775446,0,0.25347929989024,0.565879024158229,0.37456602987953,0.0640251524048693,0.574354689556133,0.476293691283074,0,0,0,0.147198920134397,0,0,0,0.145346416632329,0.752875043322645,0.0846146078916765,0,0.526139422875686,0.679020569229309,0,0.237270036248348,0.29551344712669,0,0.464810523557898,0.192906610981141,0,0.233931608445408,0.429742108096597,0.191288332068843,0.441182838239031,0.463735671240843|short_description=p5@Trdn}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:76757 | |||
|HGNC= | |||
|MCL_coexpression_id=45 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:E9Q9U7,uniprot:E9PWI1,uniprot:E9Q9K5,uniprot:Q9CV36,uniprot:Q8VIN9,uniprot:Q8VIN8,uniprot:Q8VIN7 | |||
|association_with_transcript=-268bp_to_ENSMUST00000050626,ENSMUST00000075979,ENSMUST00000095762,NM_029726,uc007etz.2,uc007eua.2,uc007eub.2,uc011xcl.1_5end | |||
|cluster_id=chr10:32803009..32803020,+ | |||
|description=CAGE_peak_5_at_Trdn_5end | |||
|id=chr10:32803009..32803020,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!3.12e-18!18;UBERON:0000948!3.12e-18!18;UBERON:0005498!3.12e-18!18;UBERON:0004140!3.12e-18!18;UBERON:0009881!3.12e-18!18;UBERON:0004141!3.12e-18!18;UBERON:0003084!3.12e-18!18;UBERON:0007005!3.12e-18!18;UBERON:0004139!3.12e-18!18;UBERON:0004291!3.12e-18!18;UBERON:0004535!3.15e-13!23;UBERON:0001009!3.15e-13!23;UBERON:0004872!5.47e-09!33;UBERON:0003103!1.43e-08!43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,6.00e-39,18;UBERON:0000948,6.00e-39,18;UBERON:0005498,6.00e-39,18;UBERON:0004140,6.00e-39,18;UBERON:0009881,6.00e-39,18;UBERON:0004141,6.00e-39,18;UBERON:0003084,6.00e-39,18;UBERON:0007005,6.00e-39,18;UBERON:0004139,6.00e-39,18;UBERON:0004291,6.00e-39,18;UBERON:0004535,1.96e-30,23;UBERON:0001009,1.96e-30,23;UBERON:0004872,4.00e-21,33;UBERON:0003103,3.98e-16,43;UBERON:0003914,1.02e-14,47;UBERON:0001374,4.59e-10,1;UBERON:0004252,4.59e-10,1;UBERON:0003663,4.59e-10,1;UBERON:0005090,4.59e-10,1;UBERON:0001630,4.59e-10,1;UBERON:0003661,4.59e-10,1;UBERON:0010890,4.59e-10,1;UBERON:0001383,4.59e-10,1;UBERON:0003081,1.27e-09,87;UBERON:0010314,2.94e-07,92;UBERON:0000926,8.41e-07,120;UBERON:0004120,8.41e-07,120;UBERON:0006603,8.41e-07,120 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0.970601099684455,0.662524555381181,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248813941220186,0,0,0,0,0.180062129805349,0,0,0.12811372028485,0,0.258703370739016,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0.828503090142008,1.17263029990548,1.2604344302271,1.42046841351126,2.55793501271625,2.31400669331067,2.79040733700489,1.87791380979733,1.63471479314037,0.658239399653922,1.14917224855367,0.648550476366846,0.730999937126662,0,0.805238512562231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0,0,0.169745085775188,0,0,0.238043640886014,0.195133647857799,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0,1.51482556322624,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0.178065603667255,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0.0603129249281559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.576060012515731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680191150845634,0,0,0,0.19318959403219,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0.729320151204882,0,0,0.222246727801615,0.206035057238894,0.962757628775446,0,0.25347929989024,0.565879024158229,0.37456602987953,0.0640251524048693,0.574354689556133,0.476293691283074,0,0,0,0.147198920134397,0,0,0,0.145346416632329,0.752875043322645,0.0846146078916765,0,0.526139422875686,0.679020569229309,0,0.237270036248348,0.29551344712669,0,0.464810523557898,0.192906610981141,0,0.233931608445408,0.429742108096597,0.191288332068843,0.441182838239031,0.463735671240843 | |||
|short_description=p5@Trdn | |||
}} |
Revision as of 07:41, 4 August 2015
Short description: | p5@Trdn |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Trdn_5end |
Coexpression cluster: | MCL_coexpression_mm9:45 |
Association with transcript: | -268bp_to_ENSMUST00000050626, ENSMUST00000075979, ENSMUST00000095762, NM_029726, uc007etz.2, uc007eua.2, uc007eub.2, uc011xcl.1_5end |
EntrezGene: | 76757 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 6.00e-39 | 18 |
heart | 6.00e-39 | 18 |
primitive heart tube | 6.00e-39 | 18 |
primary heart field | 6.00e-39 | 18 |
anterior lateral plate mesoderm | 6.00e-39 | 18 |
heart tube | 6.00e-39 | 18 |
heart primordium | 6.00e-39 | 18 |
cardiac mesoderm | 6.00e-39 | 18 |
cardiogenic plate | 6.00e-39 | 18 |
heart rudiment | 6.00e-39 | 18 |
cardiovascular system | 1.96e-30 | 23 |
circulatory system | 1.96e-30 | 23 |
splanchnic layer of lateral plate mesoderm | 4.00e-21 | 33 |
compound organ | 3.98e-16 | 43 |
epithelial tube | 1.02e-14 | 47 |
biceps femoris | 4.59e-10 | 1 |
hindlimb stylopod muscle | 4.59e-10 | 1 |
hindlimb muscle | 4.59e-10 | 1 |
muscle structure | 4.59e-10 | 1 |
muscle organ | 4.59e-10 | 1 |
limb muscle | 4.59e-10 | 1 |
pelvic complex muscle | 4.59e-10 | 1 |
muscle of leg | 4.59e-10 | 1 |
lateral plate mesoderm | 1.27e-09 | 87 |
structure with developmental contribution from neural crest | 2.94e-07 | 92 |
mesoderm | 8.41e-07 | 120 |
mesoderm-derived structure | 8.41e-07 | 120 |
presumptive mesoderm | 8.41e-07 | 120 |