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FFCP PHASE1:Mm9::chr2:155644917..155644926,-: Difference between revisions

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{{FFCP|EntrezGene=613262|HGNC=|UniProt=|association_with_transcript=12bp_to_NR_015528,uc008nlk.2_5end|description=CAGE_peak_2_at_BC029722_5end|id=chr2:155644917..155644926,-|ontology_enrichment_celltype=CL:0000738!1.34e-07!17;CL:0002087!1.34e-07!17;CL:0000219!1.61e-07!54;CL:0002031!2.82e-07!25;CL:0000838!7.02e-07!12;CL:0002320!9.18e-07!46;CL:0000134!9.18e-07!46|ontology_enrichment_celltype_v019_2=CL:0000219,1.74e-15,54;CL:0002031,2.21e-15,25;CL:0002320,8.11e-15,46;CL:0000134,8.11e-15,46;CL:0000738,1.11e-13,17;CL:0002087,1.11e-13,17;CL:0000988,1.45e-12,32;CL:0002032,1.45e-12,32;CL:0000037,1.45e-12,32;CL:0000837,1.45e-12,32;CL:0000034,2.07e-11,97;CL:0000723,2.77e-11,91;CL:0000048,2.77e-11,91;CL:0000838,3.08e-11,12;CL:0000791,6.00e-11,9;CL:0000789,6.00e-11,9;CL:0002420,6.00e-11,9;CL:0002419,6.00e-11,9;CL:0000790,6.00e-11,9;CL:0000084,3.48e-10,11;CL:0000827,3.48e-10,11;CL:0000542,4.13e-10,13;CL:0000051,4.13e-10,13;CL:0000624,5.31e-10,8;CL:0000893,6.14e-08,6;CL:0002489,6.14e-08,6;CL:0000898,6.14e-08,6;CL:0000809,6.14e-08,6;CL:0000810,6.14e-08,6;CL:0000895,6.14e-08,6;CL:0000808,6.14e-08,6;CL:0000894,6.14e-08,6;CL:0000806,6.14e-08,6;CL:0000807,6.14e-08,6;CL:0000805,6.14e-08,6;CL:0002425,6.14e-08,6;CL:0002436,6.14e-08,6;CL:0002427,6.14e-08,6;CL:0002428,6.14e-08,6;CL:0002429,6.14e-08,6;CL:0002433,6.14e-08,6;CL:0002431,6.14e-08,6;CL:0002432,6.14e-08,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002384!9.18e-07!46|ontology_enrichment_uberon_v019_2=UBERON:0002384,8.11e-15,46;UBERON:0002193,2.71e-09,48;UBERON:0002405,2.71e-09,48;UBERON:0002390,3.25e-09,45;UBERON:0003061,3.25e-09,45;UBERON:0002371,4.41e-07,16|phase1_expression=0.480446541314382,1.39590163055744,0.909998478779072,0.60492842261366,1.00179145989269,0,0.700837921786577,1.67860320474049,3.09735188733667,1.40438715793196,3.08192342805909,3.19088635981346,3.42401459862411,2.88487327982691,0,0.202475267389826,0,2.99689057090326,2.87940310572051,2.54633791078818,0.425216450755349,0.397163804803541,1.30599894569468,0.799962113967033,0.22940928106717,0,0,0.430942465371778,0.380046838912748,0,0.221730510655305,1.90509202037889,1.23012957516914,0,0.866554859253824,0.831173226792462,0.816677425049476,3.34825304589526,0,0.523523743973798,2.94115744015507,1.36609096991689,0.971020706062307,1.88845226963366,2.23029248682932,2.20256102594018,0.782391344348039,1.09012578190223,0.878744730937887,1.74986909166855,1.25987779462826,2.87505128729943,2.85230430298152,8.70434570413613,2.01656279485478,1.28629718017973,0.286533439938757,1.54701627683233,0,0,1.26766280701236,1.69422266034566,3.55717918444456,1.7997994345628,6.92206453796882,2.1314403448383,1.19840044207362,3.84218305321555,0.207379224616955,0.405017814995072,0,0.571301968807607,0.441737081903227,0.122490799214954,0,0.919218786610021,2.20231761998777,0.383062014255563,0.768032666281217,0.527545150920775,0.548925861614458,0,0.837548997004143,1.12552522006336,1.22238598221448,0.294628585473668,0.711858403995515,0.186399445825301,0.227178579999552,0.151143120213571,2.02905142091174,0,0.679971333707751,0,0.649776417447669,0.896053774194671,0,0.511290967734173,0.519572009205738,3.18005617059306,0,1.28326477414318,0,0,0.865964164044856,0.506719730950197,0.505524445014783,0.5709193985953,3.6251303710604,2.3750742250372,0.693941307064543,0.304465478312141,1.15307748628029,0.904335843315735,1.29347577849275,1.38233250462643,0.988779870937496,0.722996784599558,0,0.161766849947409,0.441683036920787,0.484875253135222,0,0.878342391034642,0.628340120440365,1.78819938646014,0.838705871541442,0,1.01656181658452,0.748953197024114,0,0.753926112677186,0.695297280769106,0.511430914660661,0.62336413367868,0.324482526135515,0.407357455401265,0.373220911830279,0.252722758433675,0.841767423545896,0,0.229902104433473,0.360124259610698,0.30140963567143,0.204109497453984,0.512454881139399,0.0937017245597288,0.776110112217047,0,0.378212160335639,0.527853372491847,0.219195732427575,0,0.696504333044333,0.411564272815887,0,0,1.02939162845886,0,0.207125772535502,0.234526059981096,0.180062061461015,0.23674473558521,0.393528463494808,0.308534225774757,0,0.536546802799238,0.116765342367169,0.329119699826961,0.492502392237286,0.648550476366846,0.877199924551994,0.439100230582101,0.402619256281115,0.841159794256509,0.308713837137853,0.660837565967596,1.05780226665418,0,0.464473343720877,0.128867461322093,0.201683524623343,0.889512175379481,1.52180500890047,0,0.494096864172033,0.502670417600539,0.198956472041151,0.58489226135736,0,1.72910439899755,0.398282546508734,0.189667900953082,0.114248512609729,0,0.203651327845314,0.193952487167626,0.210407459670956,0.252946148497029,0.738050739898011,0.784993639206874,1.72756029490521,0.889357881261447,0,0.393117990226406,0,0.202860121388503,0,0,0.575392274901621,0.162135226775035,0.274561413188081,0,0.372140947668503,0.936113019343682,1.51547326768267,1.4351793081753,1.4473305640901,1.10851914099963,0.189491411770485,0,0.678980343100753,0.234690248288502,0.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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:613262
|HGNC=
|TSSclassifier=NA
|UniProt=
|association_with_transcript=12bp_to_NR_015528,uc008nlk.2_5end
|cluster_id=chr2:155644917..155644926,-
|description=CAGE_peak_2_at_BC029722_5end
|id=chr2:155644917..155644926,-
|ontology_enrichment_celltype=CL:0000738!1.34e-07!17;CL:0002087!1.34e-07!17;CL:0000219!1.61e-07!54;CL:0002031!2.82e-07!25;CL:0000838!7.02e-07!12;CL:0002320!9.18e-07!46;CL:0000134!9.18e-07!46
|ontology_enrichment_celltype_v019_2=CL:0000219,1.74e-15,54;CL:0002031,2.21e-15,25;CL:0002320,8.11e-15,46;CL:0000134,8.11e-15,46;CL:0000738,1.11e-13,17;CL:0002087,1.11e-13,17;CL:0000988,1.45e-12,32;CL:0002032,1.45e-12,32;CL:0000037,1.45e-12,32;CL:0000837,1.45e-12,32;CL:0000034,2.07e-11,97;CL:0000723,2.77e-11,91;CL:0000048,2.77e-11,91;CL:0000838,3.08e-11,12;CL:0000791,6.00e-11,9;CL:0000789,6.00e-11,9;CL:0002420,6.00e-11,9;CL:0002419,6.00e-11,9;CL:0000790,6.00e-11,9;CL:0000084,3.48e-10,11;CL:0000827,3.48e-10,11;CL:0000542,4.13e-10,13;CL:0000051,4.13e-10,13;CL:0000624,5.31e-10,8;CL:0000893,6.14e-08,6;CL:0002489,6.14e-08,6;CL:0000898,6.14e-08,6;CL:0000809,6.14e-08,6;CL:0000810,6.14e-08,6;CL:0000895,6.14e-08,6;CL:0000808,6.14e-08,6;CL:0000894,6.14e-08,6;CL:0000806,6.14e-08,6;CL:0000807,6.14e-08,6;CL:0000805,6.14e-08,6;CL:0002425,6.14e-08,6;CL:0002436,6.14e-08,6;CL:0002427,6.14e-08,6;CL:0002428,6.14e-08,6;CL:0002429,6.14e-08,6;CL:0002433,6.14e-08,6;CL:0002431,6.14e-08,6;CL:0002432,6.14e-08,6
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon_v019_2=UBERON:0002384,8.11e-15,46;UBERON:0002193,2.71e-09,48;UBERON:0002405,2.71e-09,48;UBERON:0002390,3.25e-09,45;UBERON:0003061,3.25e-09,45;UBERON:0002371,4.41e-07,16
|phase1_expression=0.480446541314382,1.39590163055744,0.909998478779072,0.60492842261366,1.00179145989269,0,0.700837921786577,1.67860320474049,3.09735188733667,1.40438715793196,3.08192342805909,3.19088635981346,3.42401459862411,2.88487327982691,0,0.202475267389826,0,2.99689057090326,2.87940310572051,2.54633791078818,0.425216450755349,0.397163804803541,1.30599894569468,0.799962113967033,0.22940928106717,0,0,0.430942465371778,0.380046838912748,0,0.221730510655305,1.90509202037889,1.23012957516914,0,0.866554859253824,0.831173226792462,0.816677425049476,3.34825304589526,0,0.523523743973798,2.94115744015507,1.36609096991689,0.971020706062307,1.88845226963366,2.23029248682932,2.20256102594018,0.782391344348039,1.09012578190223,0.878744730937887,1.74986909166855,1.25987779462826,2.87505128729943,2.85230430298152,8.70434570413613,2.01656279485478,1.28629718017973,0.286533439938757,1.54701627683233,0,0,1.26766280701236,1.69422266034566,3.55717918444456,1.7997994345628,6.92206453796882,2.1314403448383,1.19840044207362,3.84218305321555,0.207379224616955,0.405017814995072,0,0.571301968807607,0.441737081903227,0.122490799214954,0,0.919218786610021,2.20231761998777,0.383062014255563,0.768032666281217,0.527545150920775,0.548925861614458,0,0.837548997004143,1.12552522006336,1.22238598221448,0.294628585473668,0.711858403995515,0.186399445825301,0.227178579999552,0.151143120213571,2.02905142091174,0,0.679971333707751,0,0.649776417447669,0.896053774194671,0,0.511290967734173,0.519572009205738,3.18005617059306,0,1.28326477414318,0,0,0.865964164044856,0.506719730950197,0.505524445014783,0.5709193985953,3.6251303710604,2.3750742250372,0.693941307064543,0.304465478312141,1.15307748628029,0.904335843315735,1.29347577849275,1.38233250462643,0.988779870937496,0.722996784599558,0,0.161766849947409,0.441683036920787,0.484875253135222,0,0.878342391034642,0.628340120440365,1.78819938646014,0.838705871541442,0,1.01656181658452,0.748953197024114,0,0.753926112677186,0.695297280769106,0.511430914660661,0.62336413367868,0.324482526135515,0.407357455401265,0.373220911830279,0.252722758433675,0.841767423545896,0,0.229902104433473,0.360124259610698,0.30140963567143,0.204109497453984,0.512454881139399,0.0937017245597288,0.776110112217047,0,0.378212160335639,0.527853372491847,0.219195732427575,0,0.696504333044333,0.411564272815887,0,0,1.02939162845886,0,0.207125772535502,0.234526059981096,0.180062061461015,0.23674473558521,0.393528463494808,0.308534225774757,0,0.536546802799238,0.116765342367169,0.329119699826961,0.492502392237286,0.648550476366846,0.877199924551994,0.439100230582101,0.402619256281115,0.841159794256509,0.308713837137853,0.660837565967596,1.05780226665418,0,0.464473343720877,0.128867461322093,0.201683524623343,0.889512175379481,1.52180500890047,0,0.494096864172033,0.502670417600539,0.198956472041151,0.58489226135736,0,1.72910439899755,0.398282546508734,0.189667900953082,0.114248512609729,0,0.203651327845314,0.193952487167626,0.210407459670956,0.252946148497029,0.738050739898011,0.784993639206874,1.72756029490521,0.889357881261447,0,0.393117990226406,0,0.202860121388503,0,0,0.575392274901621,0.162135226775035,0.274561413188081,0,0.372140947668503,0.936113019343682,1.51547326768267,1.4351793081753,1.4473305640901,1.10851914099963,0.189491411770485,0,0.678980343100753,0.234690248288502,0.335012514883631,0.476087281772027,0.195133647857799,1.41871629695572,1.10732344824387,0.637819074629948,1.3109065177259,1.20879487306127,1.15719246865209,1.50791283939272,3.26343410291226,1.47529281905711,0.275936746304732,0.80275294993896,0.820481806145422,0.491804836130026,0.757412781613119,1.57754109708128,0,0.646270193198397,0.238968797952552,0.222798674082394,0.566153061577665,1.21443210502468,0.584511715822624,1.18586333383957,0.321321316421807,0.567760340833074,0.534196811001766,0.977321756121456,0.494910368917606,2.65490276679926,0.485561272309963,0,0,0.295301892880773,0.307435147943927,0.775284879504663,1.81766864738753,0.712994756769443,0,0,0,1.70219802876894,0.36012218806262,0.646793418913773,0,0.177340233642274,0.713475270408282,0.329098041204242,0.913394847343798,0.704015124191131,0.21183207086382,0.882113592219848,0.98931751764888,0.161464426695906,0.663442174209714,0,0,0.582961673259701,0.370850604021019,1.36696704638282,0.412773735926445,0.740778109478847,0.188368457004691,0.683471138605126,1.14389086603261,2.03974115992626,0.69975726161829,1.38199973804424,0.954670618015114,0.158167996790568,0.609958401380546,0.324016022465404,0.418176592028937,0.218362563746178,0.404593039154462,0.578574190077352,1.30877970992015,0.90730481304255,1.24267862617385,0.56369293868419,0.598066184175915,0.165458490457098,0.583353565032143,0.516639293910924,0,0.469428954583016,0.5208175393758,0.209718688851422,0,0,1.26404448251271,1.21635129174099,0.410843828659309,1.42912905275575,0.537080087002444,0.79472541912506,0.961563596159751,0.886137163047463,1.31256384932592,0.685861259894999,0.806609481094724,0.38983152295901,0.577271049841977,1.28564592399726,0.906921534460845,0.443971906748129,0.269141569828427,0.503653849092235,0.965947970160952,0.375364950902364,0.73260649706906,0.428736758158132,1.50471631210609,0.564751842617067,0.460325236507177,0,0.515559547031063,0,1.5107877947794,0.675022500231806,0.900642406448441,0.453142408984205,0,0,0,0.170733605754134,0.972426868273176,0.209613162627982,0.367687016900028,0.222246727801615,0.206035057238894,0,1.26348605881899,0.25347929989024,0,0.37456602987953,0.576226371643824,0.229741875822453,0.476293691283074,0.115884325944855,0.192909220463705,0.412085900803307,0.883193520806384,0.342869252385415,0.354951612318675,0.476872379894642,0.290692833264657,0.470546902076653,0.846146078916765,0.365855945745545,0,0.407412341537585,1.68342681497322,0.949080144993393,0.197008964751127,0.409231043169689,0.154936841185966,0.771626443924566,0.249810577937946,0.467863216890817,0.214871054048298,0.57386499620653,0.441182838239031,0.231867835620421
|short_description=p2@BC029722
}}

Revision as of 08:38, 4 August 2015

Short description:p2@BC029722
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_BC029722_5end
Coexpression cluster:NA
Association with transcript: 12bp_to_NR_015528, uc008nlk.2_5end
EntrezGene:613262
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p2@BC029722

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.40
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.91
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.60
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.70
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E91.68
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E73.10
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.40
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E63.08
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F13.19
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E43.42
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E82.88
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A23.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A42.88
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A62.55
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.43
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.40
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.31
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.80
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.43
Ileum epithelium, pool1.CNhs13199.10252-104B90.38
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.91
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.87
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.83
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.82
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G83.35
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G92.94
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H21.37
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.97
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.89
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D92.23
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.20
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.09
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.88
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.75
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.26
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A22.85
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I98.70
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A12.02
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.29
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.55
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.69
Mouse Meningeal cells, donor3.CNhs12109.11639-122D13.56
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.80
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E76.92
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.13
Mouse Microglia, donor1.CNhs12629.11718-123C81.20
Mouse Microglia, donor2.CNhs12634.11736-123E83.84
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.41
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.38
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.77
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.53
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.55
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.84
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.22
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.19
Mouse Schwann, donor1.CNhs12507.11728-123D90.23
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.03
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.90
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.51
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.52
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I83.18
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.87
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.51
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.57
accessory axillary lymph node, adult.CNhs10475.1063-29H93.63
adrenal gland, adult.CNhs10508.49-24D72.38
adrenal gland, embryo E14.CNhs11038.406-44C50.69
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I11.15
adrenal gland, embryo E18.CNhs11026.1262-18F50.90
adrenal gland, neonate N00.CNhs11191.1311-23C11.29
adrenal gland, neonate N25.CNhs11223.1377-27I31.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.99
aorta, adult.CNhs10498.46-23H10.72
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.88
cerebellum, neonate N30.CNhs11135.1395-42I20.63
colon, adult.CNhs10468.36-18H71.79
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.84
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.02
corpora quadrigemina, adult.CNhs10501.16-22A40.75
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.75
cortex, adult.CNhs10473.12-14D50.70
cortex, neonate N30.CNhs11107.1392-42F20.51
diencephalon, adult.CNhs10482.20-12F20.62
diencephalon, neonate N30.CNhs11201.1388-42B20.32
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.41
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.37
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.84
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C60.20
eyeball, neonate N01.CNhs11140.1532-43E70.51
eyeball, neonate N02.CNhs11205.1551-44G80.09
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.53
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.03
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G10.65
heart, neonate N20.CNhs11127.821-26I60.88
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.40
hippocampus, adult.CNhs10478.13-16E80.84
hippocampus, neonate N00.CNhs11228.627-43G10.31
intestinal mucosa, adult.CNhs10506.860-29I30.66
intestine, adult.CNhs10496.178-9A31.06
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.89
intestine, embryo E18.CNhs10526.1289-20F71.52
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.49
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E31.73
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.21
kidney, neonate N10.CNhs11206.758-6D50.25
kidney, neonate N20.CNhs11113.832-19I10.74
kidney, neonate N25.CNhs11122.1353-25F30.78
kidney, neonate N30.CNhs11203.1385-42H11.73
liver, adult pregnant day01.CNhs10466.508-5B20.89
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.94
liver, neonate N20.CNhs11220.823-25A31.52
liver, neonate N25.CNhs11198.1368-26H11.44
liver, neonate N30.CNhs11106.1382-42D11.45
lung, adult.CNhs10474.28-22B11.11
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.68
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E51.42
lung, neonate N07.CNhs11111.715-19A31.11
lung, neonate N10.CNhs11219.750-23E60.64
lung, neonate N20.CNhs11109.822-18A41.31
lung, neonate N25.CNhs11119.1359-25C71.21
lung, neonate N30.CNhs11133.1394-42H21.16
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A13.26
mammary gland, adult lactating day02.CNhs10480.595-22B61.48
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C20.80
medulla oblongata, neonate N30.CNhs11200.1396-42A30.82
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.49
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.76
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.58
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.21
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I70.57
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I40.98
oviduct, adult pregnant day01.CNhs10500.988-6G60.49
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D71.82
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.70
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.65
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.71
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I70.70
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.88
skin, adult.CNhs10492.30-1C30.99
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.66
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C90.37
spleen, adult.CNhs10465.25-2G21.37
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.74
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.68
spleen, neonate N25.CNhs11099.1354-25G31.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C62.04
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.70
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.38
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D40.32
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.58
stomach, neonate N25.CNhs11104.1355-25E41.31
stomach, neonate N30.CNhs11134.1386-42I10.91
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.60
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.58
testis, embryo E17.CNhs11029.486-18I50.52
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.47
testis, neonate N07.CNhs11222.726-26I40.52
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B51.26
thymus, embryo E14.CNhs11041.402-44I41.22
thymus, embryo E15.CNhs11005.430-45I20.41
thymus, embryo E16.CNhs11002.456-26C51.43
thymus, embryo E17.CNhs10581.478-18C10.54
thymus, embryo E18.CNhs10595.1273-19G40.79
thymus, neonate N02.CNhs11181.1541-43F80.96
thymus, neonate N03.CNhs11137.2104-43C70.89
thymus, neonate N06.CNhs11197.681-26C41.31
thymus, neonate N07.CNhs11211.713-19D30.69
thymus, neonate N10.CNhs11194.748-24E40.81
thymus, neonate N20.CNhs11186.820-7A20.39
thymus, neonate N25.CNhs11125.1362-25G70.58
thymus, neonate N30.CNhs11132.1393-42G21.29
tongue, adult.CNhs10499.32-1B40.91
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.27
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.50
urinary bladder, adult.CNhs10481.879-12E40.97
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.73
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F81.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.52
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.97
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.26
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.88
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.85
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.20
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.77
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
motile cell1.74e-1554
hematopoietic lineage restricted progenitor cell2.21e-1525
connective tissue cell8.11e-1546
mesenchymal cell8.11e-1546
leukocyte1.11e-1317
nongranular leukocyte1.11e-1317
hematopoietic cell1.45e-1232
hematopoietic oligopotent progenitor cell1.45e-1232
hematopoietic stem cell1.45e-1232
hematopoietic multipotent progenitor cell1.45e-1232
stem cell2.07e-1197
somatic stem cell2.77e-1191
multi fate stem cell2.77e-1191
lymphoid lineage restricted progenitor cell3.08e-1112
mature alpha-beta T cell6.00e-119
alpha-beta T cell6.00e-119
immature T cell6.00e-119
mature T cell6.00e-119
immature alpha-beta T cell6.00e-119
T cell3.48e-1011
pro-T cell3.48e-1011
lymphocyte4.13e-1013
common lymphoid progenitor4.13e-1013
CD4-positive, alpha-beta T cell5.31e-108
thymocyte6.14e-086
double negative thymocyte6.14e-086
naive T cell6.14e-086
double-positive, alpha-beta thymocyte6.14e-086
CD4-positive, alpha-beta thymocyte6.14e-086
naive thymus-derived CD4-positive, alpha-beta T cell6.14e-086
DN4 thymocyte6.14e-086
DN1 thymic pro-T cell6.14e-086
DN2 thymocyte6.14e-086
DN3 thymocyte6.14e-086
immature single positive thymocyte6.14e-086
early T lineage precursor6.14e-086
mature CD4 single-positive thymocyte6.14e-086
resting double-positive thymocyte6.14e-086
double-positive blast6.14e-086
CD69-positive double-positive thymocyte6.14e-086
CD69-positive, CD4-positive single-positive thymocyte6.14e-086
CD4-positive, CD8-intermediate double-positive thymocyte6.14e-086
CD24-positive, CD4 single-positive thymocyte6.14e-086

Uber anatomy
Ontology termp-valuen
connective tissue8.11e-1546
hemolymphoid system2.71e-0948
immune system2.71e-0948
hematopoietic system3.25e-0945
blood island3.25e-0945
bone marrow4.41e-0716
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