FFCP PHASE1:Mm9::chr14:52630523..52630538,-: Difference between revisions
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|id=chr14:52630523..52630538,-
|short_description=p@chr14:52630523..52630538,-
|description=CAGE_peak_at_chr14:52630523..52630538,-
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=573 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr14:52630523..52630538,- | |||
|description=CAGE_peak_at_chr14:52630523..52630538,- | |||
|id=chr14:52630523..52630538,- | |||
|ontology_enrichment_celltype=CL:0000221!6.98e-19!44;CL:0000133!6.98e-19!44;CL:0002319!2.88e-18!43;CL:0000540!3.59e-14!33;CL:0000047!3.59e-14!33;CL:0000031!3.59e-14!33;CL:0000404!3.59e-14!33;CL:0000055!9.33e-14!50;CL:0000117!1.00e-10!23;CL:0000337!1.00e-10!23;CL:0000393!2.16e-10!39;CL:0000211!2.16e-10!39;CL:0002321!5.35e-07!70;CL:0000220!5.35e-07!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0002613,1.59e-11,3;CL:0002319,2.29e-09,43;CL:0000221,4.20e-09,44;CL:0000133,4.20e-09,44;CL:0000540,9.72e-09,33;CL:0000047,9.72e-09,33;CL:0000031,9.72e-09,33;CL:0000404,9.72e-09,33;CL:0000117,1.76e-08,23;CL:0000337,1.76e-08,23;CL:0000393,3.90e-07,39;CL:0000211,3.90e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!4.82e-21!102;UBERON:0000924!4.82e-21!102;UBERON:0006601!4.82e-21!102;UBERON:0000073!1.71e-19!75;UBERON:0001016!1.71e-19!75;UBERON:0001017!8.01e-19!73;UBERON:0005743!8.01e-19!73;UBERON:0002346!6.36e-18!71;UBERON:0003075!6.36e-18!71;UBERON:0007284!6.36e-18!71;UBERON:0000033!2.24e-16!63;UBERON:0003056!7.33e-14!49;UBERON:0001049!7.08e-12!52;UBERON:0005068!7.08e-12!52;UBERON:0006241!7.08e-12!52;UBERON:0007135!7.08e-12!52;UBERON:0002616!3.17e-10!49;UBERON:0000955!8.53e-10!50;UBERON:0006238!8.53e-10!50;UBERON:0005085!1.02e-09!13;UBERON:0000020!2.40e-09!12;UBERON:0001032!2.40e-09!12;UBERON:0004456!2.40e-09!12;UBERON:0007811!2.70e-09!86;UBERON:0000970!3.67e-09!9;UBERON:0000019!3.67e-09!9;UBERON:0000047!3.67e-09!9;UBERON:0004088!3.67e-09!9;UBERON:0002104!3.67e-09!9;UBERON:0001456!3.67e-09!9;UBERON:0003072!3.67e-09!9;UBERON:0003071!3.67e-09!9;UBERON:0004128!3.67e-09!9;UBERON:0000153!2.66e-08!94;UBERON:0003080!9.43e-08!40;UBERON:0002780!1.49e-07!39;UBERON:0001890!1.49e-07!39;UBERON:0006240!1.49e-07!39;UBERON:0001444!7.14e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,7.10e-19,9;UBERON:0000019,7.10e-19,9;UBERON:0000047,7.10e-19,9;UBERON:0010312,7.10e-19,9;UBERON:0004088,7.10e-19,9;UBERON:0002104,7.10e-19,9;UBERON:0001456,7.10e-19,9;UBERON:0003072,7.10e-19,9;UBERON:0004128,7.10e-19,9;UBERON:0003071,7.10e-19,9;UBERON:0000020,3.60e-18,12;UBERON:0001032,3.60e-18,12;UBERON:0004456,3.60e-18,12;UBERON:0000033,1.11e-16,13;UBERON:0005085,1.11e-16,13;UBERON:0004121,1.15e-15,95;UBERON:0000924,1.15e-15,95;UBERON:0006601,1.15e-15,95;UBERON:0003056,1.29e-15,49;UBERON:0001444,2.77e-15,11;UBERON:0002346,1.60e-14,64;UBERON:0003075,1.60e-14,64;UBERON:0007284,1.60e-14,64;UBERON:0010371,5.60e-14,73;UBERON:0010314,2.52e-10,92;UBERON:0001017,3.68e-09,73;UBERON:0001016,7.82e-09,75;UBERON:0000007,2.17e-07,8;UBERON:0003296,2.17e-07,8;UBERON:0010133,2.17e-07,8;UBERON:0000369,4.44e-07,5;UBERON:0002435,4.44e-07,5;UBERON:0000204,4.44e-07,5;UBERON:0010082,4.44e-07,5 | |||
|phase1_expression=2.40223270657191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42438965179803,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0.218025156380447,0.439372365468944,0.388859798148567,0.419959264876088,2.87505128729943,0,0,0,0,0,0,0.809265843438391,1.05798195854407,1.90149421051854,0.338844532069132,0,0,0,0,1.19840044207362,0,0.518448061542388,0.540023753326763,0.841299845405528,1.42825492201902,0.883474163806454,1.22490799214954,1.34183659425531,0,0,0.255374676170375,0.153606533256243,2.1101806036831,2.28719109006024,2.6045668527838,0.279182999001381,0,0.45839474333043,0.589257170947335,0.142371680799103,0.186399445825301,0.302904773332736,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0.563373679106722,0,0,0,0,0,0,0,0,0,0,0.913396434936424,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0.83778682725382,0,0,0,0,0.149790639404823,0,0.251308704225729,0,0.255715457330331,0.20778804455956,0.162241263067758,0.305518091550949,0,0,0.841767423545896,2.99277018814219,1.60931473103431,1.80062129805349,0.90422890701429,2.4493139694478,2.562274405697,2.62364828767241,1.29351685369508,0,0.378212160335639,0.175951124163949,0,0,0,0,0.199034266818493,0,0,0,0.828503090142008,0,0.180062061461015,0.23674473558521,0,0.154267112887378,0,0,0.116765342367169,0,0,0,0,0,0,0,0.205809224758569,0,0,1.06644125267617,0.232236671860439,0.128867461322093,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0.379335801906163,0.685491075658373,0,0.203651327845314,0.581857461502877,0.561086559122548,0.126473074248515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0.169745085775188,0.234690248288502,0,0,0,0,0,0,0,0,0,0,0,0,0.275936746304732,0.160550589987792,0.234423373184406,0,0,0.94652465824877,0.390438744296638,1.07711698866399,0.955875191810208,0.222798674082394,0.849229592366497,0,0.292255857911312,0,0,0,0,0.162886959353576,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,3.06103859853227,3.10460841078611,1.71469628025274,0.709360934569094,0.713475270408282,1.15184314421485,0.608929898229199,0,0,0,0,0,0,0,0,0,0,0,0.206386867963223,0,0,0,0,0,0,0,0,0.790839983952838,0,0,0,0,0,0,0.26175594198403,0,0,0.56369293868419,0.149516546043979,0.330916980914195,0.194451188344048,0,0,0.234714477291508,0.13020438484395,0.104859344425711,0,0.288030006257865,0,0.202725215290164,0,0.129920822977795,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0.221985953374065,0.269141569828427,0,0,0,0,0,0,0,0.460325236507177,0.572895513439397,0,0,0,0,0,0,0,1.03787347584177,1.19707462020309,0.682934423016537,0.243106717068294,0,0,0,0.206035057238894,0,0,0.50695859978048,0,0,0.0640251524048693,0.0574354689556133,0,0.231768651889711,0,0,0.147198920134397,0.342869252385415,0,0,0,0.0941093804153306,0.169229215783353,0.182927972872773,0,0.135804113845862,0,0.237270036248348,0.0985044823755635,0,0,0.192906610981141,0,0,0.429742108096597,0,0.220591419119515,0 | |phase1_expression=2.40223270657191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42438965179803,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0.218025156380447,0.439372365468944,0.388859798148567,0.419959264876088,2.87505128729943,0,0,0,0,0,0,0.809265843438391,1.05798195854407,1.90149421051854,0.338844532069132,0,0,0,0,1.19840044207362,0,0.518448061542388,0.540023753326763,0.841299845405528,1.42825492201902,0.883474163806454,1.22490799214954,1.34183659425531,0,0,0.255374676170375,0.153606533256243,2.1101806036831,2.28719109006024,2.6045668527838,0.279182999001381,0,0.45839474333043,0.589257170947335,0.142371680799103,0.186399445825301,0.302904773332736,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0.563373679106722,0,0,0,0,0,0,0,0,0,0,0.913396434936424,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0.83778682725382,0,0,0,0,0.149790639404823,0,0.251308704225729,0,0.255715457330331,0.20778804455956,0.162241263067758,0.305518091550949,0,0,0.841767423545896,2.99277018814219,1.60931473103431,1.80062129805349,0.90422890701429,2.4493139694478,2.562274405697,2.62364828767241,1.29351685369508,0,0.378212160335639,0.175951124163949,0,0,0,0,0.199034266818493,0,0,0,0.828503090142008,0,0.180062061461015,0.23674473558521,0,0.154267112887378,0,0,0.116765342367169,0,0,0,0,0,0,0,0.205809224758569,0,0,1.06644125267617,0.232236671860439,0.128867461322093,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0.379335801906163,0.685491075658373,0,0.203651327845314,0.581857461502877,0.561086559122548,0.126473074248515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0.169745085775188,0.234690248288502,0,0,0,0,0,0,0,0,0,0,0,0,0.275936746304732,0.160550589987792,0.234423373184406,0,0,0.94652465824877,0.390438744296638,1.07711698866399,0.955875191810208,0.222798674082394,0.849229592366497,0,0.292255857911312,0,0,0,0,0.162886959353576,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,3.06103859853227,3.10460841078611,1.71469628025274,0.709360934569094,0.713475270408282,1.15184314421485,0.608929898229199,0,0,0,0,0,0,0,0,0,0,0,0.206386867963223,0,0,0,0,0,0,0,0,0.790839983952838,0,0,0,0,0,0,0.26175594198403,0,0,0.56369293868419,0.149516546043979,0.330916980914195,0.194451188344048,0,0,0.234714477291508,0.13020438484395,0.104859344425711,0,0.288030006257865,0,0.202725215290164,0,0.129920822977795,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0.221985953374065,0.269141569828427,0,0,0,0,0,0,0,0.460325236507177,0.572895513439397,0,0,0,0,0,0,0,1.03787347584177,1.19707462020309,0.682934423016537,0.243106717068294,0,0,0,0.206035057238894,0,0,0.50695859978048,0,0,0.0640251524048693,0.0574354689556133,0,0.231768651889711,0,0,0.147198920134397,0.342869252385415,0,0,0,0.0941093804153306,0.169229215783353,0.182927972872773,0,0.135804113845862,0,0.237270036248348,0.0985044823755635,0,0,0.192906610981141,0,0,0.429742108096597,0,0.220591419119515,0 | ||
|short_description=p@chr14:52630523..52630538,- | |||
}} | }} |
Latest revision as of 09:46, 4 August 2015
Short description: | p@chr14:52630523..52630538, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr14:52630523..52630538, - |
Coexpression cluster: | MCL_coexpression_mm9:573 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
striatum neuron | 1.59e-11 | 3 |
neural cell | 2.29e-09 | 43 |
ectodermal cell | 4.20e-09 | 44 |
neurectodermal cell | 4.20e-09 | 44 |
neuron | 9.72e-09 | 33 |
neuronal stem cell | 9.72e-09 | 33 |
neuroblast | 9.72e-09 | 33 |
electrically signaling cell | 9.72e-09 | 33 |
CNS neuron (sensu Vertebrata) | 1.76e-08 | 23 |
neuroblast (sensu Vertebrata) | 1.76e-08 | 23 |
electrically responsive cell | 3.90e-07 | 39 |
electrically active cell | 3.90e-07 | 39 |
Ontology term | p-value | n |
---|---|---|
eye | 7.10e-19 | 9 |
camera-type eye | 7.10e-19 | 9 |
simple eye | 7.10e-19 | 9 |
immature eye | 7.10e-19 | 9 |
ocular region | 7.10e-19 | 9 |
visual system | 7.10e-19 | 9 |
face | 7.10e-19 | 9 |
optic cup | 7.10e-19 | 9 |
optic vesicle | 7.10e-19 | 9 |
eye primordium | 7.10e-19 | 9 |
sense organ | 3.60e-18 | 12 |
sensory system | 3.60e-18 | 12 |
entire sense organ system | 3.60e-18 | 12 |
head | 1.11e-16 | 13 |
ectodermal placode | 1.11e-16 | 13 |
ectoderm-derived structure | 1.15e-15 | 95 |
ectoderm | 1.15e-15 | 95 |
presumptive ectoderm | 1.15e-15 | 95 |
pre-chordal neural plate | 1.29e-15 | 49 |
subdivision of head | 2.77e-15 | 11 |
neurectoderm | 1.60e-14 | 64 |
neural plate | 1.60e-14 | 64 |
presumptive neural plate | 1.60e-14 | 64 |
ecto-epithelium | 5.60e-14 | 73 |
structure with developmental contribution from neural crest | 2.52e-10 | 92 |
central nervous system | 3.68e-09 | 73 |
nervous system | 7.82e-09 | 75 |
pituitary gland | 2.17e-07 | 8 |
gland of diencephalon | 2.17e-07 | 8 |
neuroendocrine gland | 2.17e-07 | 8 |
corpus striatum | 4.44e-07 | 5 |
striatum | 4.44e-07 | 5 |
ventral part of telencephalon | 4.44e-07 | 5 |
future corpus striatum | 4.44e-07 | 5 |