FFCP PHASE1:Mm9::chr11:96146541..96146544,+: Difference between revisions
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|id=chr11:96146541..96146544,+
|short_description=p@chr11:96146541..96146544,+
|description=CAGE_peak_at_chr11:96146541..96146544,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1518 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:96146541..96146544,+ | |||
|description=CAGE_peak_at_chr11:96146541..96146544,+ | |||
|id=chr11:96146541..96146544,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002612,1.83e-30,3;CL:0002611,1.27e-20,2;CL:0000117,5.89e-11,23;CL:0000337,5.89e-11,23;CL:0000540,1.15e-07,33;CL:0000047,1.15e-07,33;CL:0000031,1.15e-07,33;CL:0000404,1.15e-07,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000489!4.55e-19!21;UBERON:0002240!3.18e-11!6;UBERON:0005174!3.18e-11!6;UBERON:0001137!3.18e-11!6;UBERON:0001008!1.27e-10!17;UBERON:0001948!1.10e-09!5;UBERON:0002315!1.10e-09!5;UBERON:0006554!1.84e-09!16;UBERON:0002113!2.85e-09!14;UBERON:0003918!2.85e-09!14;UBERON:0005095!2.85e-09!14;UBERON:0007687!2.85e-09!14;UBERON:0003076!1.17e-08!12;UBERON:0003057!1.17e-08!12;UBERON:0003064!1.54e-07!14;UBERON:0002342!5.02e-07!10;UBERON:0005062!5.02e-07!10;UBERON:0003103!7.12e-07!43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002240,1.36e-58,6;UBERON:0005174,1.36e-58,6;UBERON:0001137,1.36e-58,6;UBERON:0001948,1.94e-49,5;UBERON:0002315,1.94e-49,5;UBERON:0002257,1.83e-30,3;UBERON:0000489,1.53e-29,21;UBERON:0003076,2.01e-29,12;UBERON:0003057,2.01e-29,12;UBERON:0002256,1.27e-20,2;UBERON:0003103,2.29e-14,43;UBERON:0002020,1.92e-07,34;UBERON:0001049,8.97e-07,52;UBERON:0005068,8.97e-07,52;UBERON:0006241,8.97e-07,52;UBERON:0007135,8.97e-07,52 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.755380907853464,0,0.367093504323363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71390590642282,5.52171352379034,0,0,0,0,0,0,0,0,0,0,0,0,3.83017161115768,8.25755748634797,2.23679334990361,0,0,0,0,0,0,0,0,0.140444420131752,0,0.519572009205738,0,0,0,0,0,0,0,0,0,0,0,0,0.913396434936424,0.230615497256059,0.301445281105245,0.23517741427141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.373220911830279,0.505445516867349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0,0.426576501070468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571242563048644,1.1270773567308,1.83286195060783,0.775809948670503,0.0701358198903186,0.0632365371242573,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,0.642202359951168,0.468846746368813,0,0,0.315508219416257,0.780877488593277,0.646270193198397,0,0,0,0,0.292255857911312,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0,0,1.11255181206306,0,0,0.185194527369712,0,0,0,0,0,0,0,0.316335993581135,0.203319467126849,0.108005340821801,0,0,0,0,0,0.259229946583586,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0.36630324853453,0.428736758158132,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0.415149390336707,0,0,0,0.628839487883947,0.183843508450014,0.222246727801615,0.206035057238894,0,0,0,0.188626341386076,0,0.128050304809739,0.114870937911227,0,0,0,0,0.147198920134397,1.02860775715625,0.177475806159338,0,0.145346416632329,0.282328141245992,0.338458431566706,0,0,0.135804113845862,0,0,0,0,0.154936841185966,0,0.249810577937946,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.755380907853464,0,0.367093504323363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71390590642282,5.52171352379034,0,0,0,0,0,0,0,0,0,0,0,0,3.83017161115768,8.25755748634797,2.23679334990361,0,0,0,0,0,0,0,0,0.140444420131752,0,0.519572009205738,0,0,0,0,0,0,0,0,0,0,0,0,0.913396434936424,0.230615497256059,0.301445281105245,0.23517741427141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.373220911830279,0.505445516867349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0,0.426576501070468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571242563048644,1.1270773567308,1.83286195060783,0.775809948670503,0.0701358198903186,0.0632365371242573,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,0.642202359951168,0.468846746368813,0,0,0.315508219416257,0.780877488593277,0.646270193198397,0,0,0,0,0.292255857911312,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0,0,1.11255181206306,0,0,0.185194527369712,0,0,0,0,0,0,0,0.316335993581135,0.203319467126849,0.108005340821801,0,0,0,0,0,0.259229946583586,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0.36630324853453,0.428736758158132,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0.415149390336707,0,0,0,0.628839487883947,0.183843508450014,0.222246727801615,0.206035057238894,0,0,0,0.188626341386076,0,0.128050304809739,0.114870937911227,0,0,0,0,0.147198920134397,1.02860775715625,0.177475806159338,0,0.145346416632329,0.282328141245992,0.338458431566706,0,0,0.135804113845862,0,0,0,0,0.154936841185966,0,0.249810577937946,0,0,0,0,0 | ||
|short_description=p@chr11:96146541..96146544,+ | |||
}} | }} |
Latest revision as of 10:25, 4 August 2015
Short description: | p@chr11:96146541..96146544, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:96146541..96146544, + |
Coexpression cluster: | MCL_coexpression_mm9:1518 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the ventral spinal cord | 1.83e-30 | 3 |
neuron of the dorsal spinal cord | 1.27e-20 | 2 |
CNS neuron (sensu Vertebrata) | 5.89e-11 | 23 |
neuroblast (sensu Vertebrata) | 5.89e-11 | 23 |
neuron | 1.15e-07 | 33 |
neuronal stem cell | 1.15e-07 | 33 |
neuroblast | 1.15e-07 | 33 |
electrically signaling cell | 1.15e-07 | 33 |
Ontology term | p-value | n |
---|---|---|
spinal cord | 1.36e-58 | 6 |
dorsal region element | 1.36e-58 | 6 |
dorsum | 1.36e-58 | 6 |
regional part of spinal cord | 1.94e-49 | 5 |
gray matter of spinal cord | 1.94e-49 | 5 |
ventral horn of spinal cord | 1.83e-30 | 3 |
cavitated compound organ | 1.53e-29 | 21 |
posterior neural tube | 2.01e-29 | 12 |
chordal neural plate | 2.01e-29 | 12 |
dorsal horn of spinal cord | 1.27e-20 | 2 |
compound organ | 2.29e-14 | 43 |
gray matter | 1.92e-07 | 34 |
neural tube | 8.97e-07 | 52 |
neural rod | 8.97e-07 | 52 |
future spinal cord | 8.97e-07 | 52 |
neural keel | 8.97e-07 | 52 |