FFCP PHASE1:Mm9::chr11:96164821..96164865,+: Difference between revisions
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{{FFCP|EntrezGene=15413|HGNC=|MCL_coexpression_id=114|UniProt=A2AA01,P09079|association_with_transcript=0bp_to_NM_008268,uc007lbu.2_5end|description=CAGE_peak_1_at_Hoxb5_5end|id=chr11:96164821..96164865,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000107,1.66e-08,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005157!1.77e-10!27;UBERON:0002048!4.25e-10!14;UBERON:0000117!4.25e-10!14;UBERON:0000171!4.25e-10!14;UBERON:0000170!4.25e-10!14;UBERON:0005597!4.25e-10!14;UBERON:0000118!4.25e-10!14;UBERON:0005178!7.91e-10!17;UBERON:0005181!7.91e-10!17;UBERON:0002224!7.91e-10!17;UBERON:0000915!7.91e-10!17;UBERON:0008947!7.91e-10!17;UBERON:0003258!7.91e-10!17;UBERON:0005177!1.89e-08!85;UBERON:0002100!2.66e-07!98;UBERON:0005153!3.92e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0005157,8.39e-15,20;UBERON:0002048,1.06e-14,14;UBERON:0000117,1.06e-14,14;UBERON:0000171,1.06e-14,14;UBERON:0000170,1.06e-14,14;UBERON:0005597,1.06e-14,14;UBERON:0000118,1.06e-14,14;UBERON:0005153,2.68e-11,17;UBERON:0005178,2.68e-11,17;UBERON:0005181,2.68e-11,17;UBERON:0002224,2.68e-11,17;UBERON:0000915,2.68e-11,17;UBERON:0008947,2.68e-11,17;UBERON:0003258,2.68e-11,17;UBERON:0002410,1.66e-08,9;UBERON:0000310,1.04e-07,6;UBERON:0001443,1.04e-07,6|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27564935226605,0,0,0,0,0,0,0,0.190023419456374,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,4.65818226509636,3.54819259268301,4.77221555620372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889294796111139,0,0,0,0,0.384218305321555,0,0,0,1.42825492201902,1.98781686856452,0,0,0,0,0,0,0,0,0,0.558365998002762,0,0,1.17851434189467,0.854230084794618,3.54158947068071,0,0,2.6087803983151,0,0,0,0,0,0.140444420131752,0,0.259786004602869,0,0,1.28326477414318,0,0,0.432982082022428,0.506719730950197,0.505524445014783,0,0,0.593768556259299,0.867426633830679,1.21786191324856,0.691846491768175,0.452167921657868,0.705532242814229,1.13099932196708,0.494389935468748,0.722996784599558,0,0,0.220841518460394,0,0,0,0.209446706813455,1.02182822083437,0,0,0,0,0.915001205637253,0,0,0,0,0,0.407357455401265,0.995255764880744,4.54900965180614,0,0,0,0,0,0,0,0,0,0,0.378212160335639,0,0,0,0,0,1.19420560091096,0,0,0,0.207125772535502,0.469052119962192,0,0.473489471170421,0.196764231747404,0.154267112887378,0,0,0,0,0,0,0,0,0,0,0,0,0,9.59797127408553,8.12828351511535,13.5310834388198,5.64713868945359,6.0042071838115,6.46767128782701,0.474529061544512,5.27036655116835,2.76468729680296,3.18330355265841,2.53453313254856,0,0.216138049874694,0.995706366271836,1.89667900953082,0.799739588268102,3.38123207019241,1.22190796707189,0.969762435838129,0.280543279561274,0.126473074248515,0.442830443938806,0.941992367048249,0.616985819609003,0,0.333690211432188,0,0,0,0,0.50925170356284,0,0.162135226775035,0,0,0,0,0.252578877947112,0.179397413521912,0,2.03228509183265,9.09558776498327,14.9927778326664,7.97801903143384,7.74477819352057,6.365237782789,2.85652369063216,4.09780660501378,8.03939234941574,7.9727288273559,5.74037167166954,2.29408640602033,1.55416483679306,3.18227928879325,0,0,0,0,9.47248480927973,7.85318300167761,0,0,85.5027274618056,98.3905635627529,92.8474844228363,0.238968797952552,1.55959071857676,1.41538265394416,64.7697122679831,66.6343356037791,72.7329511421603,0,0.425820255624806,0.534196811001766,0.488660878060728,0.989820737835213,0,3.8844901784797,1.51161778482376,0.943025398779491,1.47650946440386,2.76691633149535,1.03371317267288,1.09060118843252,1.78248689192361,0.632073515871632,0,0,0,0.18006109403131,0,0,0,0,0.164549020602121,0,0.23467170806371,0,0,0,0.484393280087717,0.241251699712623,0,0.164140899745061,0.582961673259701,4.63563255026274,0.170870880797853,0.206386867963223,0,0,0,0,0,0.139951452323658,0,0.954670618015114,6.01038387804157,5.48962561242491,2.91614420218863,2.92723614420256,2.40198820120795,1.88810084938749,1.90102948168273,0.785267825952089,0.518459893167171,0,0,0.149516546043979,0,0,0,0,0.234714477291508,0,0,0.241584120826006,0,0,0.810900861160657,0.205421914329655,0,0.358053391334963,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,1.12609485270709,1.09890974560359,1.2862102744744,0.501572104035363,0,0,0,0,0,0,0,0,0,0,3.63255716544618,5.1873233542134,2.39027048055788,1.45864030240976,2.30574478890781,2.20612210140017,2.00022055021454,1.23621034343337,0.962757628775446,0.505394423527595,0.50695859978048,1.69763707247469,1.49826411951812,0.89635213366817,0.918967503289812,3.33405583898152,0.347652977834566,0.38581844092741,0.824171801606613,1.03039244094078,0.685738504770831,0.354951612318675,0.476872379894642,1.59881058295561,1.12931256498397,0.761531471025089,1.09756783723664,1.31534855718921,1.22223702461276,0.561142271657738,0.474540072496697,0.689531376628944,0,0.77468420592983,1.73615949883027,2.24829520144151,0.935726433781634,1.28922632428979,0.57386499620653,0.220591419119515,0|short_description=p1@Hoxb5}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:15413 | |||
|HGNC= | |||
|MCL_coexpression_id=114 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:A2AA01,uniprot:P09079 | |||
|association_with_transcript=0bp_to_NM_008268,uc007lbu.2_5end | |||
|cluster_id=chr11:96164821..96164865,+ | |||
|description=CAGE_peak_1_at_Hoxb5_5end | |||
|id=chr11:96164821..96164865,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000107,1.66e-08,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005157!1.77e-10!27;UBERON:0002048!4.25e-10!14;UBERON:0000117!4.25e-10!14;UBERON:0000171!4.25e-10!14;UBERON:0000170!4.25e-10!14;UBERON:0005597!4.25e-10!14;UBERON:0000118!4.25e-10!14;UBERON:0005178!7.91e-10!17;UBERON:0005181!7.91e-10!17;UBERON:0002224!7.91e-10!17;UBERON:0000915!7.91e-10!17;UBERON:0008947!7.91e-10!17;UBERON:0003258!7.91e-10!17;UBERON:0005177!1.89e-08!85;UBERON:0002100!2.66e-07!98;UBERON:0005153!3.92e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005157,8.39e-15,20;UBERON:0002048,1.06e-14,14;UBERON:0000117,1.06e-14,14;UBERON:0000171,1.06e-14,14;UBERON:0000170,1.06e-14,14;UBERON:0005597,1.06e-14,14;UBERON:0000118,1.06e-14,14;UBERON:0005153,2.68e-11,17;UBERON:0005178,2.68e-11,17;UBERON:0005181,2.68e-11,17;UBERON:0002224,2.68e-11,17;UBERON:0000915,2.68e-11,17;UBERON:0008947,2.68e-11,17;UBERON:0003258,2.68e-11,17;UBERON:0002410,1.66e-08,9;UBERON:0000310,1.04e-07,6;UBERON:0001443,1.04e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27564935226605,0,0,0,0,0,0,0,0.190023419456374,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,4.65818226509636,3.54819259268301,4.77221555620372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889294796111139,0,0,0,0,0.384218305321555,0,0,0,1.42825492201902,1.98781686856452,0,0,0,0,0,0,0,0,0,0.558365998002762,0,0,1.17851434189467,0.854230084794618,3.54158947068071,0,0,2.6087803983151,0,0,0,0,0,0.140444420131752,0,0.259786004602869,0,0,1.28326477414318,0,0,0.432982082022428,0.506719730950197,0.505524445014783,0,0,0.593768556259299,0.867426633830679,1.21786191324856,0.691846491768175,0.452167921657868,0.705532242814229,1.13099932196708,0.494389935468748,0.722996784599558,0,0,0.220841518460394,0,0,0,0.209446706813455,1.02182822083437,0,0,0,0,0.915001205637253,0,0,0,0,0,0.407357455401265,0.995255764880744,4.54900965180614,0,0,0,0,0,0,0,0,0,0,0.378212160335639,0,0,0,0,0,1.19420560091096,0,0,0,0.207125772535502,0.469052119962192,0,0.473489471170421,0.196764231747404,0.154267112887378,0,0,0,0,0,0,0,0,0,0,0,0,0,9.59797127408553,8.12828351511535,13.5310834388198,5.64713868945359,6.0042071838115,6.46767128782701,0.474529061544512,5.27036655116835,2.76468729680296,3.18330355265841,2.53453313254856,0,0.216138049874694,0.995706366271836,1.89667900953082,0.799739588268102,3.38123207019241,1.22190796707189,0.969762435838129,0.280543279561274,0.126473074248515,0.442830443938806,0.941992367048249,0.616985819609003,0,0.333690211432188,0,0,0,0,0.50925170356284,0,0.162135226775035,0,0,0,0,0.252578877947112,0.179397413521912,0,2.03228509183265,9.09558776498327,14.9927778326664,7.97801903143384,7.74477819352057,6.365237782789,2.85652369063216,4.09780660501378,8.03939234941574,7.9727288273559,5.74037167166954,2.29408640602033,1.55416483679306,3.18227928879325,0,0,0,0,9.47248480927973,7.85318300167761,0,0,85.5027274618056,98.3905635627529,92.8474844228363,0.238968797952552,1.55959071857676,1.41538265394416,64.7697122679831,66.6343356037791,72.7329511421603,0,0.425820255624806,0.534196811001766,0.488660878060728,0.989820737835213,0,3.8844901784797,1.51161778482376,0.943025398779491,1.47650946440386,2.76691633149535,1.03371317267288,1.09060118843252,1.78248689192361,0.632073515871632,0,0,0,0.18006109403131,0,0,0,0,0.164549020602121,0,0.23467170806371,0,0,0,0.484393280087717,0.241251699712623,0,0.164140899745061,0.582961673259701,4.63563255026274,0.170870880797853,0.206386867963223,0,0,0,0,0,0.139951452323658,0,0.954670618015114,6.01038387804157,5.48962561242491,2.91614420218863,2.92723614420256,2.40198820120795,1.88810084938749,1.90102948168273,0.785267825952089,0.518459893167171,0,0,0.149516546043979,0,0,0,0,0.234714477291508,0,0,0.241584120826006,0,0,0.810900861160657,0.205421914329655,0,0.358053391334963,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,1.12609485270709,1.09890974560359,1.2862102744744,0.501572104035363,0,0,0,0,0,0,0,0,0,0,3.63255716544618,5.1873233542134,2.39027048055788,1.45864030240976,2.30574478890781,2.20612210140017,2.00022055021454,1.23621034343337,0.962757628775446,0.505394423527595,0.50695859978048,1.69763707247469,1.49826411951812,0.89635213366817,0.918967503289812,3.33405583898152,0.347652977834566,0.38581844092741,0.824171801606613,1.03039244094078,0.685738504770831,0.354951612318675,0.476872379894642,1.59881058295561,1.12931256498397,0.761531471025089,1.09756783723664,1.31534855718921,1.22223702461276,0.561142271657738,0.474540072496697,0.689531376628944,0,0.77468420592983,1.73615949883027,2.24829520144151,0.935726433781634,1.28922632428979,0.57386499620653,0.220591419119515,0 | |||
|short_description=p1@Hoxb5 | |||
}} |
Revision as of 10:30, 4 August 2015
Short description: | p1@Hoxb5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Hoxb5_5end |
Coexpression cluster: | MCL_coexpression_mm9:114 |
Association with transcript: | 0bp_to_NM_008268, uc007lbu.2_5end |
EntrezGene: | 15413 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 1.66e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
epithelial fold | 8.39e-15 | 20 |
lung | 1.06e-14 | 14 |
respiratory tube | 1.06e-14 | 14 |
respiration organ | 1.06e-14 | 14 |
pair of lungs | 1.06e-14 | 14 |
lung primordium | 1.06e-14 | 14 |
lung bud | 1.06e-14 | 14 |
epithelial bud | 2.68e-11 | 17 |
thoracic cavity element | 2.68e-11 | 17 |
thoracic segment organ | 2.68e-11 | 17 |
thoracic cavity | 2.68e-11 | 17 |
thoracic segment of trunk | 2.68e-11 | 17 |
respiratory primordium | 2.68e-11 | 17 |
endoderm of foregut | 2.68e-11 | 17 |
autonomic nervous system | 1.66e-08 | 9 |
breast | 1.04e-07 | 6 |
chest | 1.04e-07 | 6 |