FFCP PHASE1:Mm9::chr10:48938780..48938784,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=281 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:48938780..48938784,- | |||
|description=CAGE_peak_at_chr10:48938780..48938784,- | |description=CAGE_peak_at_chr10:48938780..48938784,- | ||
|id=chr10:48938780..48938784,- | |id=chr10:48938780..48938784,- | ||
|ontology_enrichment_celltype=CL:0000540!9.18e-13!33;CL:0000047!9.18e-13!33;CL:0000031!9.18e-13!33;CL:0000404!9.18e-13!33;CL:0000393!4.73e-10!39;CL:0000211!4.73e-10!39;CL:0000221!1.71e-08!44;CL:0000133!1.71e-08!44;CL:0000117!1.92e-08!23;CL:0000337!1.92e-08!23;CL:0002319!2.58e-08!43 | |ontology_enrichment_celltype=CL:0000540!9.18e-13!33;CL:0000047!9.18e-13!33;CL:0000031!9.18e-13!33;CL:0000404!9.18e-13!33;CL:0000393!4.73e-10!39;CL:0000211!4.73e-10!39;CL:0000221!1.71e-08!44;CL:0000133!1.71e-08!44;CL:0000117!1.92e-08!23;CL:0000337!1.92e-08!23;CL:0002319!2.58e-08!43 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.69e-08,33;CL:0000047,1.69e-08,33;CL:0000031,1.69e-08,33;CL:0000404,1.69e-08,33;CL:0000393,6.30e-07,39;CL:0000211,6.30e-07,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.61e-23!73;UBERON:0005743!3.61e-23!73;UBERON:0002346!5.03e-23!71;UBERON:0003075!5.03e-23!71;UBERON:0007284!5.03e-23!71;UBERON:0004121!1.10e-22!102;UBERON:0000924!1.10e-22!102;UBERON:0006601!1.10e-22!102;UBERON:0000073!5.42e-22!75;UBERON:0001016!5.42e-22!75;UBERON:0000033!9.93e-21!63;UBERON:0000955!1.40e-18!50;UBERON:0006238!1.40e-18!50;UBERON:0002616!9.32e-18!49;UBERON:0001049!2.61e-17!52;UBERON:0005068!2.61e-17!52;UBERON:0006241!2.61e-17!52;UBERON:0007135!2.61e-17!52;UBERON:0003056!8.15e-17!49;UBERON:0002020!1.46e-15!34;UBERON:0002791!1.08e-14!29;UBERON:0003528!1.08e-14!29;UBERON:0001893!1.08e-14!29;UBERON:0003080!3.67e-13!40;UBERON:0002780!1.54e-12!39;UBERON:0001890!1.54e-12!39;UBERON:0006240!1.54e-12!39;UBERON:0000956!8.95e-11!21;UBERON:0001869!8.95e-11!21;UBERON:0000203!8.95e-11!21;UBERON:0007811!1.40e-10!86;UBERON:0002619!2.54e-10!17;UBERON:0002021!9.81e-10!10;UBERON:0000411!9.81e-10!10;UBERON:0001950!9.81e-10!10;UBERON:0000153!7.27e-09!94 | |ontology_enrichment_uberon=UBERON:0001017!3.61e-23!73;UBERON:0005743!3.61e-23!73;UBERON:0002346!5.03e-23!71;UBERON:0003075!5.03e-23!71;UBERON:0007284!5.03e-23!71;UBERON:0004121!1.10e-22!102;UBERON:0000924!1.10e-22!102;UBERON:0006601!1.10e-22!102;UBERON:0000073!5.42e-22!75;UBERON:0001016!5.42e-22!75;UBERON:0000033!9.93e-21!63;UBERON:0000955!1.40e-18!50;UBERON:0006238!1.40e-18!50;UBERON:0002616!9.32e-18!49;UBERON:0001049!2.61e-17!52;UBERON:0005068!2.61e-17!52;UBERON:0006241!2.61e-17!52;UBERON:0007135!2.61e-17!52;UBERON:0003056!8.15e-17!49;UBERON:0002020!1.46e-15!34;UBERON:0002791!1.08e-14!29;UBERON:0003528!1.08e-14!29;UBERON:0001893!1.08e-14!29;UBERON:0003080!3.67e-13!40;UBERON:0002780!1.54e-12!39;UBERON:0001890!1.54e-12!39;UBERON:0006240!1.54e-12!39;UBERON:0000956!8.95e-11!21;UBERON:0001869!8.95e-11!21;UBERON:0000203!8.95e-11!21;UBERON:0007811!1.40e-10!86;UBERON:0002619!2.54e-10!17;UBERON:0002021!9.81e-10!10;UBERON:0000411!9.81e-10!10;UBERON:0001950!9.81e-10!10;UBERON:0000153!7.27e-09!94 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.87e-22,73;UBERON:0001016,9.67e-22,75;UBERON:0000073,4.65e-21,54;UBERON:0002021,1.91e-20,10;UBERON:0000411,1.91e-20,10;UBERON:0001950,1.91e-20,10;UBERON:0004121,1.03e-19,95;UBERON:0000924,1.03e-19,95;UBERON:0006601,1.03e-19,95;UBERON:0002346,2.07e-19,64;UBERON:0003075,2.07e-19,64;UBERON:0007284,2.07e-19,64;UBERON:0002020,2.29e-19,34;UBERON:0001049,1.50e-17,52;UBERON:0005068,1.50e-17,52;UBERON:0006241,1.50e-17,52;UBERON:0007135,1.50e-17,52;UBERON:0000955,2.72e-17,47;UBERON:0006238,2.72e-17,47;UBERON:0003528,5.66e-17,29;UBERON:0002791,5.66e-17,29;UBERON:0001893,5.66e-17,29;UBERON:0010371,1.62e-16,73;UBERON:0002616,1.58e-15,46;UBERON:0002619,1.45e-14,17;UBERON:0000956,2.59e-14,21;UBERON:0001869,2.59e-14,21;UBERON:0000203,2.59e-14,21;UBERON:0003056,3.54e-14,49;UBERON:0002780,6.23e-14,39;UBERON:0001890,6.23e-14,39;UBERON:0006240,6.23e-14,39;UBERON:0003080,1.62e-13,40;UBERON:0010314,2.91e-12,92 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0,0,0,0,0,0,0,0.183546752161682,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0.528990979272033,0,0,0,0,0,0,0,0,0.103689612308478,0.405017814995072,0,0,0,0.857435594504678,0.191690942036473,0.919218786610021,1.10115880999389,0.638436690425939,1.22885226604995,0.527545150920775,0.640413505216868,1.04182674111352,0,1.12552522006336,2.13917546887534,1.47314292736834,1.99320353118744,0.931997229126503,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0.173485326766136,0,0,0.301445281105245,0.23517741427141,0,0,0,0,0.323533699894818,0,0,0,1.75668478206928,4.60782754989601,0,0,0,0,0.748953197024114,0.457500602818626,0.628271760564322,1.39059456153821,0.767146371990992,1.0389402227978,0.486723789203273,0.101839363850316,0,0,0,0.520481771850815,0.229902104433473,0.180062129805349,0.452114453507145,0.612328492361951,1.2811372028485,0.374806898238915,1.29351685369508,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232533944750408,0,0,0,0.164167464079095,0,0,0,0.268412837520744,1.26173969138476,0.411618449517138,0,0,0.213288250535234,0.464473343720877,0.257734922644187,0.201683524623343,0,0,0,0.164698954724011,0,0.198956472041151,0,0,0,0,0,0.114248512609729,1.1270773567308,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.481651769963376,0.468846746368813,0,0,0.94652465824877,0.780877488593277,1.93881057959519,0.716906393857656,0.891194696329576,0,1.21443210502468,0.876767573733936,2.76701444562566,1.28528526568723,0,0,0.162886959353576,0,0,0,0.302323556964751,0.188605079755898,0,0,0,0,0,0.316036757935816,0,0,0.680879211507576,0,0,0,0,0.178368817602071,0,0,0,0,0,0,0.161464426695906,0,0.119372344003136,0,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0.203319467126849,0.324016022465404,0.418176592028937,0,0.269728692769641,0,0,0,0,0,0,0,0,0.129159823477731,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,1.12950368523413,1.38097570952153,1.14579102687879,1.89038500578056,0.685082519770642,0.755393897389701,2.70009000092722,1.35096360967266,1.81256963593682,1.03552062350364,0,0.399024873401031,0.341467211508268,0.486213434136588,0,0,0.222246727801615,0.618105171716683,0.320919209591815,0.252697211763798,0.50695859978048,0.188626341386076,0.187283014939765,0.0640251524048693,0.402048282689293,0,0.579421629724277,0,0.412085900803307,0.294397840268795,0.342869252385415,0,0.953744759789284,0.872078499793971,0.188218760830661,0.169229215783353,0.365855945745545,0.526139422875686,0,0.561142271657738,0.118635018124174,0.197008964751127,0,0.154936841185966,0.192906610981141,0,0.233931608445408,0,0,0.220591419119515,0 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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0,0,0,0,0,0,0,0.183546752161682,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0.528990979272033,0,0,0,0,0,0,0,0,0.103689612308478,0.405017814995072,0,0,0,0.857435594504678,0.191690942036473,0.919218786610021,1.10115880999389,0.638436690425939,1.22885226604995,0.527545150920775,0.640413505216868,1.04182674111352,0,1.12552522006336,2.13917546887534,1.47314292736834,1.99320353118744,0.931997229126503,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0.173485326766136,0,0,0.301445281105245,0.23517741427141,0,0,0,0,0.323533699894818,0,0,0,1.75668478206928,4.60782754989601,0,0,0,0,0.748953197024114,0.457500602818626,0.628271760564322,1.39059456153821,0.767146371990992,1.0389402227978,0.486723789203273,0.101839363850316,0,0,0,0.520481771850815,0.229902104433473,0.180062129805349,0.452114453507145,0.612328492361951,1.2811372028485,0.374806898238915,1.29351685369508,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232533944750408,0,0,0,0.164167464079095,0,0,0,0.268412837520744,1.26173969138476,0.411618449517138,0,0,0.213288250535234,0.464473343720877,0.257734922644187,0.201683524623343,0,0,0,0.164698954724011,0,0.198956472041151,0,0,0,0,0,0.114248512609729,1.1270773567308,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.481651769963376,0.468846746368813,0,0,0.94652465824877,0.780877488593277,1.93881057959519,0.716906393857656,0.891194696329576,0,1.21443210502468,0.876767573733936,2.76701444562566,1.28528526568723,0,0,0.162886959353576,0,0,0,0.302323556964751,0.188605079755898,0,0,0,0,0,0.316036757935816,0,0,0.680879211507576,0,0,0,0,0.178368817602071,0,0,0,0,0,0,0.161464426695906,0,0.119372344003136,0,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0.203319467126849,0.324016022465404,0.418176592028937,0,0.269728692769641,0,0,0,0,0,0,0,0,0.129159823477731,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,1.12950368523413,1.38097570952153,1.14579102687879,1.89038500578056,0.685082519770642,0.755393897389701,2.70009000092722,1.35096360967266,1.81256963593682,1.03552062350364,0,0.399024873401031,0.341467211508268,0.486213434136588,0,0,0.222246727801615,0.618105171716683,0.320919209591815,0.252697211763798,0.50695859978048,0.188626341386076,0.187283014939765,0.0640251524048693,0.402048282689293,0,0.579421629724277,0,0.412085900803307,0.294397840268795,0.342869252385415,0,0.953744759789284,0.872078499793971,0.188218760830661,0.169229215783353,0.365855945745545,0.526139422875686,0,0.561142271657738,0.118635018124174,0.197008964751127,0,0.154936841185966,0.192906610981141,0,0.233931608445408,0,0,0.220591419119515,0 | ||
|short_description=p@chr10:48938780..48938784,- | |short_description=p@chr10:48938780..48938784,- | ||
}} | }} |
Latest revision as of 10:30, 4 August 2015
Short description: | p@chr10:48938780..48938784, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:48938780..48938784, - |
Coexpression cluster: | MCL_coexpression_mm9:281 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.69e-08 | 33 |
neuronal stem cell | 1.69e-08 | 33 |
neuroblast | 1.69e-08 | 33 |
electrically signaling cell | 1.69e-08 | 33 |
electrically responsive cell | 6.30e-07 | 39 |
electrically active cell | 6.30e-07 | 39 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 1.87e-22 | 73 |
nervous system | 9.67e-22 | 75 |
regional part of nervous system | 4.65e-21 | 54 |
occipital lobe | 1.91e-20 | 10 |
visual cortex | 1.91e-20 | 10 |
neocortex | 1.91e-20 | 10 |
ectoderm-derived structure | 1.03e-19 | 95 |
ectoderm | 1.03e-19 | 95 |
presumptive ectoderm | 1.03e-19 | 95 |
neurectoderm | 2.07e-19 | 64 |
neural plate | 2.07e-19 | 64 |
presumptive neural plate | 2.07e-19 | 64 |
gray matter | 2.29e-19 | 34 |
neural tube | 1.50e-17 | 52 |
neural rod | 1.50e-17 | 52 |
future spinal cord | 1.50e-17 | 52 |
neural keel | 1.50e-17 | 52 |
brain | 2.72e-17 | 47 |
future brain | 2.72e-17 | 47 |
brain grey matter | 5.66e-17 | 29 |
regional part of telencephalon | 5.66e-17 | 29 |
telencephalon | 5.66e-17 | 29 |
ecto-epithelium | 1.62e-16 | 73 |
regional part of brain | 1.58e-15 | 46 |
regional part of cerebral cortex | 1.45e-14 | 17 |
cerebral cortex | 2.59e-14 | 21 |
cerebral hemisphere | 2.59e-14 | 21 |
pallium | 2.59e-14 | 21 |
pre-chordal neural plate | 3.54e-14 | 49 |
regional part of forebrain | 6.23e-14 | 39 |
forebrain | 6.23e-14 | 39 |
future forebrain | 6.23e-14 | 39 |
anterior neural tube | 1.62e-13 | 40 |
structure with developmental contribution from neural crest | 2.91e-12 | 92 |