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FFCP PHASE1:Mm9::chr19:59018084..59018138,-: Difference between revisions

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{{FFCP|EntrezGene=73442|HGNC=|MCL_coexpression_id=208|UniProt=|association_with_transcript=5bp_to_uc008iax.1,uc008iaz.1,uc008iba.1_5end|description=CAGE_peak_3_at_Hspa12a_5end|id=chr19:59018084..59018138,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!3.90e-22!63;UBERON:0000955!1.31e-18!50;UBERON:0006238!1.31e-18!50;UBERON:0001049!1.41e-18!52;UBERON:0005068!1.41e-18!52;UBERON:0006241!1.41e-18!52;UBERON:0007135!1.41e-18!52;UBERON:0002346!2.85e-18!71;UBERON:0003075!2.85e-18!71;UBERON:0007284!2.85e-18!71;UBERON:0002616!4.64e-18!49;UBERON:0004121!4.85e-16!102;UBERON:0000924!4.85e-16!102;UBERON:0006601!4.85e-16!102;UBERON:0003056!7.16e-16!49;UBERON:0001017!1.23e-14!73;UBERON:0005743!1.23e-14!73;UBERON:0000073!3.00e-14!75;UBERON:0001016!3.00e-14!75;UBERON:0003080!9.82e-14!40;UBERON:0000153!2.84e-13!94;UBERON:0002780!4.06e-13!39;UBERON:0001890!4.06e-13!39;UBERON:0006240!4.06e-13!39;UBERON:0007811!7.72e-13!86;UBERON:0002020!2.76e-10!34;UBERON:0000475!1.07e-08!200;UBERON:0002791!1.35e-08!29;UBERON:0003528!1.35e-08!29;UBERON:0001893!1.35e-08!29;UBERON:0002021!1.61e-07!10;UBERON:0000411!1.61e-07!10;UBERON:0001950!1.61e-07!10;UBERON:0000956!4.06e-07!21;UBERON:0001869!4.06e-07!21;UBERON:0000203!4.06e-07!21;UBERON:0004111!7.64e-07!122|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.03e-26,54;UBERON:0001049,1.54e-24,52;UBERON:0005068,1.54e-24,52;UBERON:0006241,1.54e-24,52;UBERON:0007135,1.54e-24,52;UBERON:0002346,3.82e-24,64;UBERON:0003075,3.82e-24,64;UBERON:0007284,3.82e-24,64;UBERON:0001017,9.09e-23,73;UBERON:0000955,4.07e-22,47;UBERON:0006238,4.07e-22,47;UBERON:0001016,1.04e-21,75;UBERON:0010371,1.51e-21,73;UBERON:0002616,2.75e-21,46;UBERON:0004121,7.17e-21,95;UBERON:0000924,7.17e-21,95;UBERON:0006601,7.17e-21,95;UBERON:0003056,2.30e-20,49;UBERON:0003080,5.84e-19,40;UBERON:0002780,5.36e-18,39;UBERON:0001890,5.36e-18,39;UBERON:0006240,5.36e-18,39;UBERON:0010314,6.45e-16,92;UBERON:0002020,6.66e-13,34;UBERON:0002021,3.40e-11,10;UBERON:0000411,3.40e-11,10;UBERON:0001950,3.40e-11,10;UBERON:0003528,5.92e-11,29;UBERON:0002791,5.92e-11,29;UBERON:0001893,5.92e-11,29;UBERON:0002619,1.66e-10,17;UBERON:0004111,2.79e-09,122;UBERON:0000956,4.24e-09,21;UBERON:0001869,4.24e-09,21;UBERON:0000203,4.24e-09,21;UBERON:0000025,4.34e-09,114;UBERON:0001894,1.32e-08,10;UBERON:0006222,1.32e-08,10|phase1_expression=2.40223270657191,0.348975407639361,0,0,0,0,0,0.387369970324729,0,0.70219357896598,0,0.159544317990673,0.171200729931206,0.262261207256992,0,0.202475267389826,0,0.473193248037357,1.37114433605739,0,13.2667532635669,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0.61506478758457,0,0,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0.503587271902309,0.405507724878058,0.917733760808408,0.782391344348039,0.436050312760893,1.75748946187577,1.94429899074283,1.25987779462826,0,0.671130424230945,0,0,0,0,0,0.404632921719196,0,0,0.338844532069132,0,0,0,0,1.49800055259202,3.84218305321555,0.933206510776299,0.810035629990144,0.420649922702764,3.14216082844184,5.07997644188711,0.244981598429908,0.191690942036473,0,34.1359231098105,47.8827517819454,32.7181915835799,0.527545150920775,0.731901148819277,0,31.8268618861574,15.1945904708554,16.9606055032259,2.65165726926301,1.56608848879013,0.745597783301202,0.302904773332736,0.453429360640713,1.73918693221007,0,0,0,0,0,1.40444420131752,0.511290967734173,0.259786004602869,0.35333957451034,2.39433813620357,1.28326477414318,0,0,0,0.506719730950197,0,1.37020655662872,0.776813650941515,1.1875371125186,0,0.304465478312141,0.691846491768175,1.05505848386836,1.17588707135705,0.628332956648377,0,0.86759614151947,0,0.161766849947409,0,0,0,21.3729981818429,17.3840766655168,0,0,0,0,30.407499799179,18.7575247155637,1.63350657746724,30.7669046740329,20.7129520437568,29.9214784165767,23.8494656709604,0.305518091550949,1.11966273549084,0.758168275301024,3.15662783829711,1.56144531555244,1.14951052216736,0.360124259610698,0.90422890701429,0.816437989815934,1.2811372028485,1.40552586839593,12.6764651662118,0.431135985865684,0.756424320671277,1.58356011747554,0.219195732427575,1.11218899690239,0.696504333044333,0.411564272815887,0.995171334092466,0,0,0,0.621377317606506,0.234526059981096,0.36012412292203,0.710234206755631,0.196764231747404,0.154267112887378,0.232533944750408,0,0.583826711835847,0,0.164167464079095,0.243206428637567,0.292399974850665,0.219550115291051,0,15.5614561937454,1.9551876352064,0.330418782983798,0,0.639864751605702,0.696710015581316,0,0.403367049246685,0.22237804384487,0,0,0.164698954724011,0,0,0.38992817423824,0,0.216138049874694,0.199141273254367,0.379335801906163,0.799739588268102,2.25415471346161,0.407302655690628,1.16371492300575,0.841629838683823,1.83385957660346,1.77132177575523,1.255989822731,1.23397163921801,0,0,0,0,0.405720242777006,0,0.25462585178142,0,0,0,0,0,0.312037673114561,0.505157755894224,0,0,1.84753190166605,0.757965647081939,0.162964976442026,0.339490171550376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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:73442
|HGNC=
|MCL_coexpression_id=208
|TSSclassifier=NA
|UniProt=
|association_with_transcript=5bp_to_uc008iax.1,uc008iaz.1,uc008iba.1_5end
|cluster_id=chr19:59018084..59018138,-
|description=CAGE_peak_3_at_Hspa12a_5end
|id=chr19:59018084..59018138,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000033!3.90e-22!63;UBERON:0000955!1.31e-18!50;UBERON:0006238!1.31e-18!50;UBERON:0001049!1.41e-18!52;UBERON:0005068!1.41e-18!52;UBERON:0006241!1.41e-18!52;UBERON:0007135!1.41e-18!52;UBERON:0002346!2.85e-18!71;UBERON:0003075!2.85e-18!71;UBERON:0007284!2.85e-18!71;UBERON:0002616!4.64e-18!49;UBERON:0004121!4.85e-16!102;UBERON:0000924!4.85e-16!102;UBERON:0006601!4.85e-16!102;UBERON:0003056!7.16e-16!49;UBERON:0001017!1.23e-14!73;UBERON:0005743!1.23e-14!73;UBERON:0000073!3.00e-14!75;UBERON:0001016!3.00e-14!75;UBERON:0003080!9.82e-14!40;UBERON:0000153!2.84e-13!94;UBERON:0002780!4.06e-13!39;UBERON:0001890!4.06e-13!39;UBERON:0006240!4.06e-13!39;UBERON:0007811!7.72e-13!86;UBERON:0002020!2.76e-10!34;UBERON:0000475!1.07e-08!200;UBERON:0002791!1.35e-08!29;UBERON:0003528!1.35e-08!29;UBERON:0001893!1.35e-08!29;UBERON:0002021!1.61e-07!10;UBERON:0000411!1.61e-07!10;UBERON:0001950!1.61e-07!10;UBERON:0000956!4.06e-07!21;UBERON:0001869!4.06e-07!21;UBERON:0000203!4.06e-07!21;UBERON:0004111!7.64e-07!122
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.03e-26,54;UBERON:0001049,1.54e-24,52;UBERON:0005068,1.54e-24,52;UBERON:0006241,1.54e-24,52;UBERON:0007135,1.54e-24,52;UBERON:0002346,3.82e-24,64;UBERON:0003075,3.82e-24,64;UBERON:0007284,3.82e-24,64;UBERON:0001017,9.09e-23,73;UBERON:0000955,4.07e-22,47;UBERON:0006238,4.07e-22,47;UBERON:0001016,1.04e-21,75;UBERON:0010371,1.51e-21,73;UBERON:0002616,2.75e-21,46;UBERON:0004121,7.17e-21,95;UBERON:0000924,7.17e-21,95;UBERON:0006601,7.17e-21,95;UBERON:0003056,2.30e-20,49;UBERON:0003080,5.84e-19,40;UBERON:0002780,5.36e-18,39;UBERON:0001890,5.36e-18,39;UBERON:0006240,5.36e-18,39;UBERON:0010314,6.45e-16,92;UBERON:0002020,6.66e-13,34;UBERON:0002021,3.40e-11,10;UBERON:0000411,3.40e-11,10;UBERON:0001950,3.40e-11,10;UBERON:0003528,5.92e-11,29;UBERON:0002791,5.92e-11,29;UBERON:0001893,5.92e-11,29;UBERON:0002619,1.66e-10,17;UBERON:0004111,2.79e-09,122;UBERON:0000956,4.24e-09,21;UBERON:0001869,4.24e-09,21;UBERON:0000203,4.24e-09,21;UBERON:0000025,4.34e-09,114;UBERON:0001894,1.32e-08,10;UBERON:0006222,1.32e-08,10
|phase1_expression=2.40223270657191,0.348975407639361,0,0,0,0,0,0.387369970324729,0,0.70219357896598,0,0.159544317990673,0.171200729931206,0.262261207256992,0,0.202475267389826,0,0.473193248037357,1.37114433605739,0,13.2667532635669,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0.61506478758457,0,0,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0.503587271902309,0.405507724878058,0.917733760808408,0.782391344348039,0.436050312760893,1.75748946187577,1.94429899074283,1.25987779462826,0,0.671130424230945,0,0,0,0,0,0.404632921719196,0,0,0.338844532069132,0,0,0,0,1.49800055259202,3.84218305321555,0.933206510776299,0.810035629990144,0.420649922702764,3.14216082844184,5.07997644188711,0.244981598429908,0.191690942036473,0,34.1359231098105,47.8827517819454,32.7181915835799,0.527545150920775,0.731901148819277,0,31.8268618861574,15.1945904708554,16.9606055032259,2.65165726926301,1.56608848879013,0.745597783301202,0.302904773332736,0.453429360640713,1.73918693221007,0,0,0,0,0,1.40444420131752,0.511290967734173,0.259786004602869,0.35333957451034,2.39433813620357,1.28326477414318,0,0,0,0.506719730950197,0,1.37020655662872,0.776813650941515,1.1875371125186,0,0.304465478312141,0.691846491768175,1.05505848386836,1.17588707135705,0.628332956648377,0,0.86759614151947,0,0.161766849947409,0,0,0,21.3729981818429,17.3840766655168,0,0,0,0,30.407499799179,18.7575247155637,1.63350657746724,30.7669046740329,20.7129520437568,29.9214784165767,23.8494656709604,0.305518091550949,1.11966273549084,0.758168275301024,3.15662783829711,1.56144531555244,1.14951052216736,0.360124259610698,0.90422890701429,0.816437989815934,1.2811372028485,1.40552586839593,12.6764651662118,0.431135985865684,0.756424320671277,1.58356011747554,0.219195732427575,1.11218899690239,0.696504333044333,0.411564272815887,0.995171334092466,0,0,0,0.621377317606506,0.234526059981096,0.36012412292203,0.710234206755631,0.196764231747404,0.154267112887378,0.232533944750408,0,0.583826711835847,0,0.164167464079095,0.243206428637567,0.292399974850665,0.219550115291051,0,15.5614561937454,1.9551876352064,0.330418782983798,0,0.639864751605702,0.696710015581316,0,0.403367049246685,0.22237804384487,0,0,0.164698954724011,0,0,0.38992817423824,0,0.216138049874694,0.199141273254367,0.379335801906163,0.799739588268102,2.25415471346161,0.407302655690628,1.16371492300575,0.841629838683823,1.83385957660346,1.77132177575523,1.255989822731,1.23397163921801,0,0,0,0,0.405720242777006,0,0.25462585178142,0,0,0,0,0,0.312037673114561,0.505157755894224,0,0,1.84753190166605,0.757965647081939,0.162964976442026,0.339490171550376,0.704070744865506,1.34005005953453,1.19021820443007,1.17080188714679,1.26108115284953,0.664394068946325,0.797273843287435,0.983179888294428,1.55416483679306,1.3018415272336,0,0,0,0.551873492609465,40.137647496948,25.2005126173237,0.491804836130026,0,0.315508219416257,0,0,0.238968797952552,0,0.283076530788832,0,0,0.395287777946524,9.3183181762324,1.84522110770749,0.35613120733451,0.488660878060728,4.78413356620353,0,0.728341908464944,0.302323556964751,0.943025398779491,0.885905678642318,1.22974059177571,1.80899805217755,1.45413491791002,0.712994756769443,0.632073515871632,1.05418608574999,0,10.2131881726136,1.08036656418786,1.4229455216103,3.21505552547388,4.61084607469911,4.63758925765383,5.26556865926787,3.65357938937519,0.469343416127421,0.847328283455281,0.441056796109924,0.98931751764888,0.322928853391811,0.482503399425247,0.238744688006273,0.820704498725306,0,38.0121869121545,0.683483523191411,0.82554747185289,0,0,0,0.686334519619568,0,0.139951452323658,0,0.954670618015114,0.632671987162271,0.406638934253697,0.648032044930808,0.627264888043406,0,0.269728692769641,0.247960367176008,0.523511883968059,0.518459893167171,1.24267862617385,68.7705385194712,1.04661582230785,0.165458490457098,0.777804753376191,1.16243841129958,0.337912250981556,0.352071715937262,1.95306577265925,4.19437377702843,20.0514820285585,31.9713306946231,0,0.608175645870493,0.410843828659309,0.129920822977795,0,0.79472541912506,0.360586348559907,0,0.302899349844443,0.228620419965,0.100826185136841,0.0974578807397524,0.0962118416403295,0.467507608726276,0.680191150845634,0.221985953374065,0.179427713218951,0,0.772758376128762,0.187682475451182,0.915758121336325,0.643105137237198,0,18.6368108063632,14.2700823317225,12.0308057822273,16.3260523226503,43.1601987455505,37.0143009720953,24.300810008345,27.0192721934532,32.6262534468627,31.583379016861,0.31136204275253,0.798049746802062,1.87806966329548,0.729320151204882,0.628839487883947,0,0.44449345560323,0.618105171716683,0.962757628775446,0.252697211763798,0.760437899670719,1.32038438970253,0.561849044819294,0.640251524048693,0.402048282689293,0.952587382566147,0.463537303779422,0.192909220463705,0.412085900803307,0.735994600671987,0,0.887379030796687,0.476872379894642,0.726732083161643,0.658765662907314,0.761531471025089,1.09756783723664,1.05227884575137,0.950628796921032,0,1.54225523561426,0.985044823755635,2.86461730218783,0.929621047115796,0.385813221962283,0.749431733813838,0.701794825336225,0.214871054048298,0,1.32354851471709,0.463735671240843
|short_description=p3@Hspa12a
}}

Revision as of 11:12, 4 August 2015

Short description:p3@Hspa12a
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Hspa12a_5end
Coexpression cluster:MCL_coexpression_mm9:208
Association with transcript: 5bp_to_uc008iax.1, uc008iaz.1, uc008iba.1_5end
EntrezGene:73442
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Hspa12a

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.40
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.39
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.70
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.16
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.26
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.47
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.37
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A313.27
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.50
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.41
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.92
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.76
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.94
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.26
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.67
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.40
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C81.50
Mouse Microglia, donor2.CNhs12634.11736-123E83.84
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.93
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.81
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D55.08
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.24
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.19
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D334.14
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F347.88
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D732.72
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.53
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.73
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E431.83
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E515.19
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I616.96
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.65
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.57
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.75
Mouse Schwann, donor1.CNhs12507.11728-123D90.30
Mouse Schwann, donor2.CNhs12573.11746-123F90.45
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.74
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.40
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.51
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.39
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.51
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.37
accessory axillary lymph node, adult.CNhs10475.1063-29H90.78
adrenal gland, adult.CNhs10508.49-24D71.19
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F51.06
adrenal gland, neonate N00.CNhs11191.1311-23C11.18
adrenal gland, neonate N25.CNhs11223.1377-27I30.63
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.87
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B221.37
cerebellum, neonate N30.CNhs11135.1395-42I217.38
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A430.41
corpus striatum, adult.CNhs10487.19-21D818.76
corpus striatum, neonate N00.CNhs11226.630-43F11.63
cortex, adult.CNhs10473.12-14D530.77
cortex, neonate N30.CNhs11107.1392-42F220.71
diencephalon, adult.CNhs10482.20-12F229.92
diencephalon, neonate N30.CNhs11201.1388-42B223.85
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.12
epididymis, adult.CNhs10490.58-23B20.76
eyeball, adult.CNhs10484.31-12G43.16
eyeball, embryo E12.CNhs11016.345-16C61.56
eyeball, embryo E14.CNhs10521.399-16E21.15
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.90
eyeball, neonate N00.CNhs11207.633-15C60.82
eyeball, neonate N01.CNhs11140.1532-43E71.28
eyeball, neonate N02.CNhs11205.1551-44G81.41
eyeball, neonate N16.CNhs11188.777-19A212.68
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H20.76
forelimb, embryo E13.CNhs10589.384-1E21.58
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E71.11
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I61.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.62
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.71
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.58
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.24
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E815.56
hippocampus, neonate N00.CNhs11228.627-43G11.96
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.80
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C71.16
kidney, neonate N00.CNhs11214.646-21G70.84
kidney, neonate N10.CNhs11206.758-6D51.83
kidney, neonate N20.CNhs11113.832-19I11.77
kidney, neonate N25.CNhs11122.1353-25F31.26
kidney, neonate N30.CNhs11203.1385-42H11.23
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.51
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B11.85
lung, embryo E12.CNhs10522.354-16G20.76
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.70
lung, embryo E17.CNhs10605.480-44A61.34
lung, embryo E18.CNhs10583.1287-20I61.19
lung, neonate N00.CNhs11224.640-42C61.17
lung, neonate N06.CNhs11212.683-20E51.26
lung, neonate N07.CNhs11111.715-19A30.66
lung, neonate N10.CNhs11219.750-23E60.80
lung, neonate N20.CNhs11109.822-18A40.98
lung, neonate N25.CNhs11119.1359-25C71.55
lung, neonate N30.CNhs11133.1394-42H21.30
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C240.14
medulla oblongata, neonate N30.CNhs11200.1396-42A325.20
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.49
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I99.32
ovary, adult.CNhs10507.91-2I71.85
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G64.78
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.94
pancreas, embryo E17.CNhs10599.1558-45G30.89
pancreas, embryo E18.CNhs10580.1535-43I71.23
pancreas, neonate N00.CNhs11105.645-26G91.81
pancreas, neonate N01.CNhs11138.1531-43D71.45
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G810.21
pituitary gland, embryo E12.CNhs11018.346-16E61.08
pituitary gland, embryo E13.CNhs11009.370-44C71.42
pituitary gland, embryo E14.CNhs11037.398-44A53.22
pituitary gland, embryo E15.CNhs10592.427-16B94.61
pituitary gland, embryo E16.CNhs11036.449-43F64.64
pituitary gland, embryo E17.CNhs11039.1265-44F55.27
pituitary gland, neonate N00.CNhs11190.1308-22E93.65
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G30.85
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C30.99
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.48
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.82
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C938.01
spleen, adult.CNhs10465.25-2G20.68
spleen, embryo E16.CNhs11035.461-43C10.83
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.69
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.63
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.65
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.25
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.52
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G568.77
testis, embryo E13.CNhs11031.389-23F51.05
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.78
testis, embryo E17.CNhs11029.486-18I51.16
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.35
testis, neonate N07.CNhs11222.726-26I41.95
testis, neonate N10.CNhs11204.763-44D94.19
testis, neonate N20.CNhs11110.839-18H320.05
testis, neonate N30.CNhs11130.1391-42E231.97
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I20.41
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.79
thymus, neonate N02.CNhs11181.1541-43F80.36
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.30
thymus, neonate N07.CNhs11211.713-19D30.23
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.47
tongue, adult.CNhs10499.32-1B40.68
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.18
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.77
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.92
vagina, adult.CNhs10502.89-27D50.64
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A118.64
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A214.27
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A312.03
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D716.33
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A443.16
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A537.01
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A624.30
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A727.02
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A832.63
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A931.58
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H21.88
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.40
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.74
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.10
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.99
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.93
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D11.32
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.03e-2654
neural tube1.54e-2452
neural rod1.54e-2452
future spinal cord1.54e-2452
neural keel1.54e-2452
neurectoderm3.82e-2464
neural plate3.82e-2464
presumptive neural plate3.82e-2464
central nervous system9.09e-2373
brain4.07e-2247
future brain4.07e-2247
nervous system1.04e-2175
ecto-epithelium1.51e-2173
regional part of brain2.75e-2146
ectoderm-derived structure7.17e-2195
ectoderm7.17e-2195
presumptive ectoderm7.17e-2195
pre-chordal neural plate2.30e-2049
anterior neural tube5.84e-1940
regional part of forebrain5.36e-1839
forebrain5.36e-1839
future forebrain5.36e-1839
structure with developmental contribution from neural crest6.45e-1692
gray matter6.66e-1334
occipital lobe3.40e-1110
visual cortex3.40e-1110
neocortex3.40e-1110
brain grey matter5.92e-1129
regional part of telencephalon5.92e-1129
telencephalon5.92e-1129
regional part of cerebral cortex1.66e-1017
anatomical conduit2.79e-09122
cerebral cortex4.24e-0921
cerebral hemisphere4.24e-0921
pallium4.24e-0921
tube4.34e-09114
diencephalon1.32e-0810
future diencephalon1.32e-0810
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