Personal tools

FFCP PHASE1:Mm9::chr10:59756092..59756107,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=NA
|EntrezGene=NA
|HGNC=
|HGNC=
|MCL_coexpression_id=38
|TSSclassifier=NA
|UniProt=NA
|UniProt=NA
|association_with_transcript=NA
|association_with_transcript=NA
|cluster_id=chr10:59756092..59756107,+
|description=CAGE_peak_at_chr10:59756092..59756107,+
|description=CAGE_peak_at_chr10:59756092..59756107,+
|id=chr10:59756092..59756107,+
|id=chr10:59756092..59756107,+
|ontology_enrichment_celltype=CL:0002371!1.78e-12!118;CL:0000144!2.34e-12!121;CL:0000012!2.34e-12!121;CL:0000548!3.86e-12!115;CL:0000004!3.86e-12!115;CL:0000255!3.86e-12!115;CL:0000034!8.32e-11!97;CL:0000723!4.45e-10!91;CL:0000048!4.45e-10!91;CL:0000055!1.39e-09!50;CL:0002321!1.97e-08!70;CL:0000220!1.97e-08!70;CL:0002319!3.32e-07!43;CL:0000221!3.39e-07!44;CL:0000133!3.39e-07!44;CL:0000219!4.64e-07!54
|ontology_enrichment_celltype=CL:0002371!1.78e-12!118;CL:0000144!2.34e-12!121;CL:0000012!2.34e-12!121;CL:0000548!3.86e-12!115;CL:0000004!3.86e-12!115;CL:0000255!3.86e-12!115;CL:0000034!8.32e-11!97;CL:0000723!4.45e-10!91;CL:0000048!4.45e-10!91;CL:0000055!1.39e-09!50;CL:0002321!1.97e-08!70;CL:0000220!1.97e-08!70;CL:0002319!3.32e-07!43;CL:0000221!3.39e-07!44;CL:0000133!3.39e-07!44;CL:0000219!4.64e-07!54
|ontology_enrichment_celltype_v019_2=CL:0000034,2.58e-11,97;CL:0000723,8.23e-11,91;CL:0000048,8.23e-11,91;CL:0002321,2.32e-09,70;CL:0000219,5.02e-08,54;CL:0002319,9.06e-08,43;CL:0000221,1.92e-07,44;CL:0000133,1.92e-07,44;CL:0002453,6.14e-07,8
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!1.82e-08!75;UBERON:0001016!1.82e-08!75;UBERON:0002020!3.29e-08!34;UBERON:0001017!5.93e-08!73;UBERON:0005743!5.93e-08!73;UBERON:0002791!7.91e-07!29;UBERON:0003528!7.91e-07!29;UBERON:0001893!7.91e-07!29
|ontology_enrichment_uberon=UBERON:0000073!1.82e-08!75;UBERON:0001016!1.82e-08!75;UBERON:0002020!3.29e-08!34;UBERON:0001017!5.93e-08!73;UBERON:0005743!5.93e-08!73;UBERON:0002791!7.91e-07!29;UBERON:0003528!7.91e-07!29;UBERON:0001893!7.91e-07!29
|ontology_enrichment_uberon_v019_2=UBERON:0002021,1.75e-09,10;UBERON:0000411,1.75e-09,10;UBERON:0001950,1.75e-09,10;UBERON:0002020,2.00e-09,34;UBERON:0001016,5.94e-09,75;UBERON:0001017,9.09e-09,73;UBERON:0000073,2.23e-08,54;UBERON:0004121,4.28e-07,95;UBERON:0000924,4.28e-07,95;UBERON:0006601,4.28e-07,95;UBERON:0003528,5.07e-07,29;UBERON:0002791,5.07e-07,29;UBERON:0001893,5.07e-07,29;UBERON:0002619,5.13e-07,17
|phase1_expression=0.320297694209588,0,0,0.60492842261366,0.500895729946347,0.33575854382378,0.934450562382103,0.903863264091034,0.140788722151667,0,0,0.159544317990673,0.684802919724823,0.437102012094987,0.666219523631325,1.82227740650843,0.699561878128147,0.946386496074713,1.50825876966313,0.42438965179803,0.935476191661768,0.397163804803541,0.522399578277871,0.799962113967033,1.14704640533585,0.57423196411502,0,0.861884930743556,2.28028103347649,2.01624103807945,0.221730510655305,0,0.61506478758457,0,0,0.664938581433969,0,2.09265815368454,3.1253413780952,0,1.76469446409304,1.36609096991689,0.971020706062307,3.14742044938943,2.83855407414641,1.46837401729345,0,3.92445281484804,2.41654801007919,6.61061656852564,3.21968769738334,1.43752564364972,0.503347818173209,0.725362142011344,1.68046899571232,0.771778308107841,1.14613375975503,2.06268836910977,0.606949382578793,0.528990979272033,1.90149421051854,2.71075625655306,1.77858959222228,30.1466405289269,50.4321844909157,37.6554460921433,10.7856039786626,10.373894243682,0.725827286159344,2.16009501330705,0.210324961351382,4.28476476605705,2.87129103237098,0.734944795289724,0.383381884072945,0.919218786610021,1.10115880999389,3.95830748064082,3.22573719838111,0.659431438650969,1.18933936683133,0.52091337055676,5.862842979029,3.37657566019008,3.97275444219706,2.35702868378934,3.27454865837937,0.186399445825301,1.66597625333005,0.982430281388212,1.73918693221007,2.58127163094416,2.03991400112325,2.69851595818909,1.29955283489534,0.448026887097336,1.54488862144927,3.06774580640504,3.37721805983729,1.41335829804136,0.563373679106722,3.84979432242953,2.54805239706646,0,1.29894624606728,0.253359865475099,0.505524445014783,1.48439043634778,0.776813650941515,1.33597925158342,0,0.608930956624282,0.230615497256059,0.753613202763113,0.352766121407114,0.753999547978053,1.23597483867187,0.722996784599558,0,0.161766849947409,0.220841518460394,0,1.86391761218122,0,1.46612694769419,0.255457055208591,2.63593273913025,0,0.889491589511453,0.449371918214468,0.457500602818626,0,0.521472960576829,0.767146371990992,1.45451631191692,0.486723789203273,0.203678727700633,0.622034853050465,1.0108910337347,2.94618598241064,0.130120442962704,0.229902104433473,0.360124259610698,0,0.204109497453984,0.2562274405697,0.0937017245597288,1.03481348295606,0,0.378212160335639,0.351902248327898,0,0.278047249225598,0,0.205782136407943,0.398068533636986,0.702213187313235,0,0.852490498186778,0.207125772535502,0.469052119962192,0.180062061461015,0.23674473558521,0.196764231747404,0.617068451549513,0.232533944750408,0,0.350296027101508,0,0.32833492815819,0.243206428637567,0.584799949701329,1.3173006917463,0.402619256281115,0.630869845692382,0.205809224758569,0,0.264450566663544,0,0,0.128867461322093,0.201683524623343,0,0.190225626112559,0,0.658795818896044,0,0,0.19496408711912,0,1.08069024937347,0.398282546508734,0.189667900953082,0.228497025219458,0,0.203651327845314,0.387904974335251,0.49095073923223,0.632365371242573,0.147610147979602,0.31399745568275,0.616985819609003,0.592905254174298,0,0.393117990226406,0,0,0.241177159752417,0,0,0.648540907100142,0.549122826376163,10.0637744569148,0,0.936113019343682,0.252578877947112,0.179397413521912,1.4473305640901,0.369506380333209,0,0.162964976442026,0,0,0.167506257441816,0,0.195133647857799,0.472905432318573,0.44292937929755,0.637819074629948,0.491589944147214,0.863424909329478,0.867894351489069,73.8877291302434,15.7732648307426,0.983528546038072,1.93155722413313,0.963303539926752,0.703270119553219,0.163934945376675,1.26235463602186,0,0.780877488593277,0.430846795465598,0.238968797952552,1.33679204449436,0.283076530788832,0,1.75353514746787,0.395287777946524,0.321321316421807,1.13552068166615,0.890328018336276,0.488660878060728,0.494910368917606,0,0,0.604647113929502,0.188605079755898,0,0.614870295887855,0,0,0.356497378384721,0,0,0,1.02131881726136,0.18006109403131,0.388076051348264,0.214337035031592,0.177340233642274,0.178368817602071,0.164549020602121,0.304464949114599,6.57080782578389,2.1183207086382,0.220528398054962,0.8244312647074,0.322928853391811,0,0.119372344003136,0.164140899745061,0.291480836629851,0.927126510052548,1.02522528478712,0.206386867963223,0.370389054739423,0.376736914009382,0.136694227721025,0.228778173206523,0.339956859987711,0.839708713941948,0.276399947608848,1.90934123603023,0,0,0.756037385752609,0.418176592028937,0.218362563746178,0.269728692769641,0.247960367176008,0.785267825952089,0.777689839750757,0,0,0.897099276263873,0.496375471371293,0.194451188344048,0.258319646955462,0.337912250981556,0.58678619322877,0.2604087696879,0.629156066554265,0,1.15212002503146,0.316011120628178,0.405450430580328,0.205421914329655,0.389762468933385,0,0.39736270956253,0.120195449519969,0.147689527174577,0.302899349844443,0.381034033274999,0,0.38983152295901,0.384847366561318,0.233753804363138,0.453460767230423,1.33191572024439,1.70456327558004,1.17519231454855,0.19318959403219,2.064507229963,0,0,0,1.12950368523413,2.30162618253588,2.86447756719698,2.06223818812425,3.42541259885321,3.0215755895588,2.70009000092722,1.35096360967266,3.62513927187364,4.14208249401456,0.103787347584177,0,0.682934423016537,0,0,0.367687016900028,0.666740183404846,0,0,0.252697211763798,0.50695859978048,0,0.655490552289177,0.640251524048693,0.17230640686684,0,0.347652977834566,0.192909220463705,0.412085900803307,0.147198920134397,0.342869252385415,0.354951612318675,0,0.290692833264657,0.470546902076653,0.0846146078916765,0.182927972872773,0.263069711437843,0.407412341537585,0,0.237270036248348,0.492522411877817,0,0.619747364743864,0.192906610981141,0,0,0.644613162144895,0.956441660344217,0.661774257358546,0.463735671240843
|phase1_expression=0.320297694209588,0,0,0.60492842261366,0.500895729946347,0.33575854382378,0.934450562382103,0.903863264091034,0.140788722151667,0,0,0.159544317990673,0.684802919724823,0.437102012094987,0.666219523631325,1.82227740650843,0.699561878128147,0.946386496074713,1.50825876966313,0.42438965179803,0.935476191661768,0.397163804803541,0.522399578277871,0.799962113967033,1.14704640533585,0.57423196411502,0,0.861884930743556,2.28028103347649,2.01624103807945,0.221730510655305,0,0.61506478758457,0,0,0.664938581433969,0,2.09265815368454,3.1253413780952,0,1.76469446409304,1.36609096991689,0.971020706062307,3.14742044938943,2.83855407414641,1.46837401729345,0,3.92445281484804,2.41654801007919,6.61061656852564,3.21968769738334,1.43752564364972,0.503347818173209,0.725362142011344,1.68046899571232,0.771778308107841,1.14613375975503,2.06268836910977,0.606949382578793,0.528990979272033,1.90149421051854,2.71075625655306,1.77858959222228,30.1466405289269,50.4321844909157,37.6554460921433,10.7856039786626,10.373894243682,0.725827286159344,2.16009501330705,0.210324961351382,4.28476476605705,2.87129103237098,0.734944795289724,0.383381884072945,0.919218786610021,1.10115880999389,3.95830748064082,3.22573719838111,0.659431438650969,1.18933936683133,0.52091337055676,5.862842979029,3.37657566019008,3.97275444219706,2.35702868378934,3.27454865837937,0.186399445825301,1.66597625333005,0.982430281388212,1.73918693221007,2.58127163094416,2.03991400112325,2.69851595818909,1.29955283489534,0.448026887097336,1.54488862144927,3.06774580640504,3.37721805983729,1.41335829804136,0.563373679106722,3.84979432242953,2.54805239706646,0,1.29894624606728,0.253359865475099,0.505524445014783,1.48439043634778,0.776813650941515,1.33597925158342,0,0.608930956624282,0.230615497256059,0.753613202763113,0.352766121407114,0.753999547978053,1.23597483867187,0.722996784599558,0,0.161766849947409,0.220841518460394,0,1.86391761218122,0,1.46612694769419,0.255457055208591,2.63593273913025,0,0.889491589511453,0.449371918214468,0.457500602818626,0,0.521472960576829,0.767146371990992,1.45451631191692,0.486723789203273,0.203678727700633,0.622034853050465,1.0108910337347,2.94618598241064,0.130120442962704,0.229902104433473,0.360124259610698,0,0.204109497453984,0.2562274405697,0.0937017245597288,1.03481348295606,0,0.378212160335639,0.351902248327898,0,0.278047249225598,0,0.205782136407943,0.398068533636986,0.702213187313235,0,0.852490498186778,0.207125772535502,0.469052119962192,0.180062061461015,0.23674473558521,0.196764231747404,0.617068451549513,0.232533944750408,0,0.350296027101508,0,0.32833492815819,0.243206428637567,0.584799949701329,1.3173006917463,0.402619256281115,0.630869845692382,0.205809224758569,0,0.264450566663544,0,0,0.128867461322093,0.201683524623343,0,0.190225626112559,0,0.658795818896044,0,0,0.19496408711912,0,1.08069024937347,0.398282546508734,0.189667900953082,0.228497025219458,0,0.203651327845314,0.387904974335251,0.49095073923223,0.632365371242573,0.147610147979602,0.31399745568275,0.616985819609003,0.592905254174298,0,0.393117990226406,0,0,0.241177159752417,0,0,0.648540907100142,0.549122826376163,10.0637744569148,0,0.936113019343682,0.252578877947112,0.179397413521912,1.4473305640901,0.369506380333209,0,0.162964976442026,0,0,0.167506257441816,0,0.195133647857799,0.472905432318573,0.44292937929755,0.637819074629948,0.491589944147214,0.863424909329478,0.867894351489069,73.8877291302434,15.7732648307426,0.983528546038072,1.93155722413313,0.963303539926752,0.703270119553219,0.163934945376675,1.26235463602186,0,0.780877488593277,0.430846795465598,0.238968797952552,1.33679204449436,0.283076530788832,0,1.75353514746787,0.395287777946524,0.321321316421807,1.13552068166615,0.890328018336276,0.488660878060728,0.494910368917606,0,0,0.604647113929502,0.188605079755898,0,0.614870295887855,0,0,0.356497378384721,0,0,0,1.02131881726136,0.18006109403131,0.388076051348264,0.214337035031592,0.177340233642274,0.178368817602071,0.164549020602121,0.304464949114599,6.57080782578389,2.1183207086382,0.220528398054962,0.8244312647074,0.322928853391811,0,0.119372344003136,0.164140899745061,0.291480836629851,0.927126510052548,1.02522528478712,0.206386867963223,0.370389054739423,0.376736914009382,0.136694227721025,0.228778173206523,0.339956859987711,0.839708713941948,0.276399947608848,1.90934123603023,0,0,0.756037385752609,0.418176592028937,0.218362563746178,0.269728692769641,0.247960367176008,0.785267825952089,0.777689839750757,0,0,0.897099276263873,0.496375471371293,0.194451188344048,0.258319646955462,0.337912250981556,0.58678619322877,0.2604087696879,0.629156066554265,0,1.15212002503146,0.316011120628178,0.405450430580328,0.205421914329655,0.389762468933385,0,0.39736270956253,0.120195449519969,0.147689527174577,0.302899349844443,0.381034033274999,0,0.38983152295901,0.384847366561318,0.233753804363138,0.453460767230423,1.33191572024439,1.70456327558004,1.17519231454855,0.19318959403219,2.064507229963,0,0,0,1.12950368523413,2.30162618253588,2.86447756719698,2.06223818812425,3.42541259885321,3.0215755895588,2.70009000092722,1.35096360967266,3.62513927187364,4.14208249401456,0.103787347584177,0,0.682934423016537,0,0,0.367687016900028,0.666740183404846,0,0,0.252697211763798,0.50695859978048,0,0.655490552289177,0.640251524048693,0.17230640686684,0,0.347652977834566,0.192909220463705,0.412085900803307,0.147198920134397,0.342869252385415,0.354951612318675,0,0.290692833264657,0.470546902076653,0.0846146078916765,0.182927972872773,0.263069711437843,0.407412341537585,0,0.237270036248348,0.492522411877817,0,0.619747364743864,0.192906610981141,0,0,0.644613162144895,0.956441660344217,0.661774257358546,0.463735671240843
|short_description=p@chr10:59756092..59756107,+
|short_description=p@chr10:59756092..59756107,+
}}
}}

Latest revision as of 12:45, 4 August 2015

Short description:p@chr10:59756092..59756107, +
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chr10:59756092..59756107, +
Coexpression cluster:MCL_coexpression_mm9:38
Association with transcript: NA
EntrezGene:NA
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p@chr10:59756092..59756107+

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.60
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.93
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.90
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.16
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.68
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.44
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.82
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.95
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.51
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.94
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.40
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.52
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.80
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.15
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.86
Ileum epithelium, pool1.CNhs13199.10252-104B92.28
Ileum epithelium, pool2.CNhs13232.10253-104C12.02
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.66
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G82.09
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H13.13
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.76
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H21.37
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.97
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D83.15
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D92.84
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.47
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C23.92
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B82.42
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C36.61
Mouse Astrocytes, donor2.CNhs12078.11552-120C43.22
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.50
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.68
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.77
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.15
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.06
Mouse Granule cells, donor1.CNhs12131.11713-123C30.61
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C62.71
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C730.15
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E750.43
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D237.66
Mouse Microglia, donor1.CNhs12629.11718-123C810.79
Mouse Microglia, donor2.CNhs12634.11736-123E810.37
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.73
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.16
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.87
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.73
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.38
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.96
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.23
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.66
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.19
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E45.86
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.38
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.97
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.36
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.27
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.19
Mouse Schwann, donor1.CNhs12507.11728-123D91.67
Mouse Schwann, donor2.CNhs12573.11746-123F90.98
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.74
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F72.58
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.04
Mouse hepatocyte, donor3.CNhs12615.11637-122C82.70
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.30
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.54
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I73.07
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E33.38
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.41
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.56
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H13.85
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.30
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.48
accessory axillary lymph node, adult.CNhs10475.1063-29H90.78
adrenal gland, adult.CNhs10508.49-24D71.34
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.75
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.75
amnion, adult pregnant day17.5.CNhs10488.583-22A81.24
aorta, adult.CNhs10498.46-23H10.72
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I21.47
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C72.64
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.89
corpora quadrigemina, adult.CNhs10501.16-22A40.45
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.52
cortex, neonate N30.CNhs11107.1392-42F20.77
diencephalon, adult.CNhs10482.20-12F21.45
diencephalon, neonate N30.CNhs11201.1388-42B20.49
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.62
epididymis, adult.CNhs10490.58-23B21.01
eyeball, adult.CNhs10484.31-12G42.95
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.20
eyeball, neonate N01.CNhs11140.1532-43E70.26
eyeball, neonate N02.CNhs11205.1551-44G80.09
eyeball, neonate N16.CNhs11188.777-19A21.03
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.85
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.62
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.35
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.24
heart, neonate N20.CNhs11127.821-26I60.58
heart, neonate N25.CNhs11196.1351-25D31.32
heart, neonate N30.CNhs11202.1390-42D20.40
hippocampus, adult.CNhs10478.13-16E80.63
hippocampus, neonate N00.CNhs11228.627-43G10.21
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.66
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E31.08
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.49
kidney, neonate N10.CNhs11206.758-6D50.63
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.62
liver, adult pregnant day01.CNhs10466.508-5B20.59
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.65
liver, neonate N03.CNhs11123.1345-25G20.55
liver, neonate N06.CNhs11101.684-20A810.06
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.94
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D11.45
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.47
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.64
lung, neonate N20.CNhs11109.822-18A40.49
lung, neonate N25.CNhs11119.1359-25C70.86
lung, neonate N30.CNhs11133.1394-42H20.87
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A173.89
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A115.77
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H21.93
medulla oblongata, adult.CNhs10477.17-12C20.96
medulla oblongata, neonate N30.CNhs11200.1396-42A30.70
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.26
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.34
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.75
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I71.14
ovary, embryo E18.CNhs11040.505-44H70.89
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G60.49
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I76.57
placenta, adult pregnant day17.CNhs10464.577-18G32.12
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.82
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C90.93
spleen, adult.CNhs10465.25-2G21.03
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.34
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.84
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.28
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.76
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.25
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I10.78
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.90
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.59
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.63
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E21.15
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.39
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.30
thymus, neonate N07.CNhs11211.713-19D30.38
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.39
thymus, neonate N25.CNhs11125.1362-25G70.38
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.33
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.70
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.18
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F52.06
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.30
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.86
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.06
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A43.43
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.02
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.35
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A83.63
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A94.14
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.68
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.08
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.49
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.96
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
stem cell2.58e-1197
somatic stem cell8.23e-1191
multi fate stem cell8.23e-1191
embryonic cell2.32e-0970
motile cell5.02e-0854
neural cell9.06e-0843
ectodermal cell1.92e-0744
neurectodermal cell1.92e-0744
oligodendrocyte precursor cell6.14e-078

Uber anatomy
Ontology termp-valuen
occipital lobe1.75e-0910
visual cortex1.75e-0910
neocortex1.75e-0910
gray matter2.00e-0934
nervous system5.94e-0975
central nervous system9.09e-0973
regional part of nervous system2.23e-0854
ectoderm-derived structure4.28e-0795
ectoderm4.28e-0795
presumptive ectoderm4.28e-0795
brain grey matter5.07e-0729
regional part of telencephalon5.07e-0729
telencephalon5.07e-0729
regional part of cerebral cortex5.13e-0717
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr10:59756092..59756107,%2B&oldid=3778979"