FFCP PHASE1:Mm9::chr4:108252086..108252094,+: Difference between revisions
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{{FFCP|EntrezGene=18392|HGNC=|MCL_coexpression_id=1097|UniProt=E9PX49|association_with_transcript=20bp_to_ENSMUST00000075835_5end|description=CAGE_peak_2_at_Orc1_5end|id=chr4:108252086..108252094,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000049,4.86e-13,19;CL:0000988,4.76e-11,32;CL:0002032,4.76e-11,32;CL:0000037,4.76e-11,32;CL:0000837,4.76e-11,32;CL:0000763,2.50e-08,16;CL:0000349,3.48e-08,3;CL:0000351,3.48e-08,3;CL:0002027,6.26e-08,3;CL:0002006,6.26e-08,3;CL:0002024,6.26e-08,3;CL:0000034,4.05e-07,97;CL:0000050,9.22e-07,9;CL:0002320,9.82e-07,46;CL:0000134,9.82e-07,46|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0000358,3.48e-08,3;UBERON:0000307,3.48e-08,3;UBERON:0007010,3.48e-08,3;UBERON:0002384,9.82e-07,46|phase1_expression=0,0.348975407639361,0,0,0,0.671517087647559,0,1.54947988129892,0.422366166455,0.468129052643987,0,0,0.513602189793617,1.13646523144697,1.66554880907831,1.82227740650843,2.09868563438444,0,0,0,0.255129870453209,0.297872853602656,1.04479915655574,0.319984845586813,0.22940928106717,0,0.430761996159075,0.215471232685889,0,0.504060259519861,0,3.81018404075779,3.07532393792285,0,0,0.332469290716985,1.22501613757421,0,0,0,0,0,0.971020706062307,0,0,0,0,0,0,0,0.139986421625363,0,0.167782606057736,0,0.672187598284928,0.514518872071894,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0.414758449233911,0,0.420649922702764,0,0,0.122490799214954,0.383381884072945,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0.227178579999552,0.302286240427142,0.289864488701678,0,0,0,0,0,0,0.511290967734173,0.519572009205738,0,0.14084341977668,1.28326477414318,0,0,0,0.760079596425296,0,0.45673551887624,0,0,0.346970653532272,0,0.461230994512117,0,0.352766121407114,0,0,0,0,1.13236794963186,1.54589062922275,0,0,0,0,0,1.31796636956512,1.79970819298022,2.1601938602421,0,0,0,0,0,0,0,0.305518091550949,0.248813941220186,0,0,0.520481771850815,0,0.360124259610698,0.150704817835715,0.204109497453984,0.12811372028485,0,0,0.431135985865684,0.756424320671277,0.527853372491847,0,0.278047249225598,0,0.205782136407943,0.398068533636986,1.40442637462647,1.80143534980301,1.13665399758237,0,0,0.180062061461015,0.23674473558521,0,0.308534225774757,0,0.268273401399619,0,0.16455984991348,0.164167464079095,0,0,0,0.134206418760372,0,0.102904612379284,0,0.264450566663544,0.213288250535234,0.232236671860439,0.515469845288373,0.201683524623343,0.444756087689741,0,0,0.329397909448022,0.251335208800269,0.198956472041151,0,0,0,0,0.569003702859245,0.456994050438915,1.1270773567308,0.203651327845314,0.193952487167626,0.0701358198903186,0.0632365371242573,0,0,0,0,1.16791574001266,1.76903095601883,1.12431056192427,1.82574109249653,0.964708639009667,2.03700681425136,1.43848068725405,0.486405680325106,0.549122826376163,1.43768206527355,0,0.312037673114561,0,0,0,0,0.37898282354097,0.162964976442026,0.339490171550376,0.704070744865506,0.167506257441816,0,0,0.157635144106191,0.221464689648775,0,0,0,0,0,0,0,0.275936746304732,0,0,1.47541450839008,0,0.631016438832513,1.17131623288992,1.29254038639679,1.19484398976276,0.222798674082394,0.283076530788832,0.404810701674894,0.584511715822624,0,0,0,0.178065603667255,0.162886959353576,0,0,0,0.604647113929502,0,0,0,0,0,0.712994756769443,0,0,0,0,0,0.129358683782755,0,0,0.356737635204141,0,0,0.469343416127421,0.21183207086382,0,0.16488625294148,0.322928853391811,0.542816324353403,0,0.492422699235184,0,0,0.512612642393558,0.206386867963223,0.555583582109135,2.63715839806567,2.7338845544205,2.28778173206523,1.18984900995699,0.839708713941948,1.79659965945751,0,0.158167996790568,0,0.216010681643603,0.418176592028937,0,0.134864346384821,0.0826534557253359,0.26175594198403,0,0,0.56369293868419,0.747582730219894,0.165458490457098,0.777804753376191,0.387479470433193,0.337912250981556,0,0.5208175393758,1.04859344425711,0.483168241652012,0.864090018773596,0.316011120628178,0.810900861160657,0.616265742988964,0.77952493786677,0.537080087002444,0.993406773906324,0.480781798079875,1.18151621739662,0.504832249740738,0.381034033274999,0.604957110821043,0.194915761479505,0.0962118416403295,0.233753804363138,0,3.99574716073316,4.75483440030221,1.34307693091263,0,0.187682475451182,0.183151624267265,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,1.14166082342594,0.399024873401031,0.512200817262403,0.729320151204882,0,0.183843508450014,0.222246727801615,0,0.320919209591815,0.758091635291392,0,0,0.187283014939765,0.192075457214608,0.229741875822453,0.476293691283074,0,0.77163688185482,0,0,0,0,0,0.436039249896986,0.0941093804153306,0.169229215783353,0,0,0,0,0.237270036248348,0.197008964751127,0,0.154936841185966,0,0.249810577937946,0.233931608445408,0,0,0.220591419119515,0.231867835620421|short_description=p2@Orc1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:18392 | |||
|HGNC= | |||
|MCL_coexpression_id=1097 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:E9PX49 | |||
|association_with_transcript=20bp_to_ENSMUST00000075835_5end | |||
|cluster_id=chr4:108252086..108252094,+ | |||
|description=CAGE_peak_2_at_Orc1_5end | |||
|id=chr4:108252086..108252094,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000049,4.86e-13,19;CL:0000988,4.76e-11,32;CL:0002032,4.76e-11,32;CL:0000037,4.76e-11,32;CL:0000837,4.76e-11,32;CL:0000763,2.50e-08,16;CL:0000349,3.48e-08,3;CL:0000351,3.48e-08,3;CL:0002027,6.26e-08,3;CL:0002006,6.26e-08,3;CL:0002024,6.26e-08,3;CL:0000034,4.05e-07,97;CL:0000050,9.22e-07,9;CL:0002320,9.82e-07,46;CL:0000134,9.82e-07,46 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000358,3.48e-08,3;UBERON:0000307,3.48e-08,3;UBERON:0007010,3.48e-08,3;UBERON:0002384,9.82e-07,46 | |||
|phase1_expression=0,0.348975407639361,0,0,0,0.671517087647559,0,1.54947988129892,0.422366166455,0.468129052643987,0,0,0.513602189793617,1.13646523144697,1.66554880907831,1.82227740650843,2.09868563438444,0,0,0,0.255129870453209,0.297872853602656,1.04479915655574,0.319984845586813,0.22940928106717,0,0.430761996159075,0.215471232685889,0,0.504060259519861,0,3.81018404075779,3.07532393792285,0,0,0.332469290716985,1.22501613757421,0,0,0,0,0,0.971020706062307,0,0,0,0,0,0,0,0.139986421625363,0,0.167782606057736,0,0.672187598284928,0.514518872071894,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0.414758449233911,0,0.420649922702764,0,0,0.122490799214954,0.383381884072945,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0.227178579999552,0.302286240427142,0.289864488701678,0,0,0,0,0,0,0.511290967734173,0.519572009205738,0,0.14084341977668,1.28326477414318,0,0,0,0.760079596425296,0,0.45673551887624,0,0,0.346970653532272,0,0.461230994512117,0,0.352766121407114,0,0,0,0,1.13236794963186,1.54589062922275,0,0,0,0,0,1.31796636956512,1.79970819298022,2.1601938602421,0,0,0,0,0,0,0,0.305518091550949,0.248813941220186,0,0,0.520481771850815,0,0.360124259610698,0.150704817835715,0.204109497453984,0.12811372028485,0,0,0.431135985865684,0.756424320671277,0.527853372491847,0,0.278047249225598,0,0.205782136407943,0.398068533636986,1.40442637462647,1.80143534980301,1.13665399758237,0,0,0.180062061461015,0.23674473558521,0,0.308534225774757,0,0.268273401399619,0,0.16455984991348,0.164167464079095,0,0,0,0.134206418760372,0,0.102904612379284,0,0.264450566663544,0.213288250535234,0.232236671860439,0.515469845288373,0.201683524623343,0.444756087689741,0,0,0.329397909448022,0.251335208800269,0.198956472041151,0,0,0,0,0.569003702859245,0.456994050438915,1.1270773567308,0.203651327845314,0.193952487167626,0.0701358198903186,0.0632365371242573,0,0,0,0,1.16791574001266,1.76903095601883,1.12431056192427,1.82574109249653,0.964708639009667,2.03700681425136,1.43848068725405,0.486405680325106,0.549122826376163,1.43768206527355,0,0.312037673114561,0,0,0,0,0.37898282354097,0.162964976442026,0.339490171550376,0.704070744865506,0.167506257441816,0,0,0.157635144106191,0.221464689648775,0,0,0,0,0,0,0,0.275936746304732,0,0,1.47541450839008,0,0.631016438832513,1.17131623288992,1.29254038639679,1.19484398976276,0.222798674082394,0.283076530788832,0.404810701674894,0.584511715822624,0,0,0,0.178065603667255,0.162886959353576,0,0,0,0.604647113929502,0,0,0,0,0,0.712994756769443,0,0,0,0,0,0.129358683782755,0,0,0.356737635204141,0,0,0.469343416127421,0.21183207086382,0,0.16488625294148,0.322928853391811,0.542816324353403,0,0.492422699235184,0,0,0.512612642393558,0.206386867963223,0.555583582109135,2.63715839806567,2.7338845544205,2.28778173206523,1.18984900995699,0.839708713941948,1.79659965945751,0,0.158167996790568,0,0.216010681643603,0.418176592028937,0,0.134864346384821,0.0826534557253359,0.26175594198403,0,0,0.56369293868419,0.747582730219894,0.165458490457098,0.777804753376191,0.387479470433193,0.337912250981556,0,0.5208175393758,1.04859344425711,0.483168241652012,0.864090018773596,0.316011120628178,0.810900861160657,0.616265742988964,0.77952493786677,0.537080087002444,0.993406773906324,0.480781798079875,1.18151621739662,0.504832249740738,0.381034033274999,0.604957110821043,0.194915761479505,0.0962118416403295,0.233753804363138,0,3.99574716073316,4.75483440030221,1.34307693091263,0,0.187682475451182,0.183151624267265,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,1.14166082342594,0.399024873401031,0.512200817262403,0.729320151204882,0,0.183843508450014,0.222246727801615,0,0.320919209591815,0.758091635291392,0,0,0.187283014939765,0.192075457214608,0.229741875822453,0.476293691283074,0,0.77163688185482,0,0,0,0,0,0.436039249896986,0.0941093804153306,0.169229215783353,0,0,0,0,0.237270036248348,0.197008964751127,0,0.154936841185966,0,0.249810577937946,0.233931608445408,0,0,0.220591419119515,0.231867835620421 | |||
|short_description=p2@Orc1 | |||
}} |
Revision as of 12:47, 4 August 2015
Short description: | p2@Orc1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Orc1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1097 |
Association with transcript: | 20bp_to_ENSMUST00000075835_5end |
EntrezGene: | 18392 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
common myeloid progenitor | 4.86e-13 | 19 |
hematopoietic cell | 4.76e-11 | 32 |
hematopoietic oligopotent progenitor cell | 4.76e-11 | 32 |
hematopoietic stem cell | 4.76e-11 | 32 |
hematopoietic multipotent progenitor cell | 4.76e-11 | 32 |
myeloid cell | 2.50e-08 | 16 |
extraembryonic cell | 3.48e-08 | 3 |
trophoblast cell | 3.48e-08 | 3 |
CD9-positive, CD41-positive megakaryocyte cell | 6.26e-08 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 6.26e-08 | 3 |
Kit-positive megakaryocyte progenitor cell | 6.26e-08 | 3 |
stem cell | 4.05e-07 | 97 |
megakaryocyte-erythroid progenitor cell | 9.22e-07 | 9 |
connective tissue cell | 9.82e-07 | 46 |
mesenchymal cell | 9.82e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
blastocyst | 3.48e-08 | 3 |
blastula | 3.48e-08 | 3 |
cleaving embryo | 3.48e-08 | 3 |
connective tissue | 9.82e-07 | 46 |