FFCP PHASE1:Mm9::chr5:67490447..67490458,-: Difference between revisions
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{{FFCP|EntrezGene=18935|HGNC=|MCL_coexpression_id=107|UniProt=O35690|association_with_transcript=81bp_to_ENSMUST00000012664_5end|description=CAGE_peak_7_at_Phox2b_5end|id=chr5:67490447..67490458,-|ontology_enrichment_celltype=CL:0000107!1.41e-19!9|ontology_enrichment_celltype_v019_2=CL:0000107,3.71e-57,9;CL:0000540,5.34e-15,33;CL:0000047,5.34e-15,33;CL:0000031,5.34e-15,33;CL:0000404,5.34e-15,33;CL:0000393,1.51e-12,39;CL:0000211,1.51e-12,39;CL:0002319,2.73e-11,43;CL:0000221,5.19e-11,44;CL:0000133,5.19e-11,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002342!3.60e-20!10;UBERON:0005062!3.60e-20!10;UBERON:0002410!1.41e-19!9;UBERON:0000010!1.27e-15!11;UBERON:0002369!2.50e-14!7;UBERON:0006858!2.50e-14!7;UBERON:0003064!2.50e-08!14;UBERON:0000011!9.88e-08!3;UBERON:0000013!1.26e-07!3;UBERON:0002005!2.13e-07!3;UBERON:0005428!2.13e-07!3;UBERON:0005157!2.98e-07!27|ontology_enrichment_uberon_v019_2=UBERON:0002410,3.71e-57,9;UBERON:0000010,1.21e-46,11;UBERON:0000011,1.65e-20,3;UBERON:0000013,3.45e-20,3;UBERON:0010313,1.72e-19,3;UBERON:0002342,1.72e-19,3;UBERON:0002005,1.72e-19,3;UBERON:0005428,1.72e-19,3;UBERON:0005062,1.72e-19,3;UBERON:0002369,3.45e-14,7;UBERON:0006858,3.45e-14,7;UBERON:0003064,3.22e-07,14|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279182999001381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.63286352971307,1.38788261412909,1.21786191324856,0.922461989024234,1.50722640552623,0.705532242814229,0.879666139307728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062129805349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.853153002140936,0.696710015581316,0.38660238396628,0,0.667134131534611,0,0,0.164698954724011,0,0,0.19496408711912,0,0.216138049874694,0,0,0.342745537829186,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.35163505977661,0,0,3.47059041357882,2.73307121007647,4.30846795465598,8.60287672629187,8.02075226696619,7.07691326972081,7.2865926301481,7.59865230569411,6.7198922250909,0,0,0,0,0,0,0.242780636154981,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790839983952838,1.01659733563424,0.540026704109006,0.418176592028937,0,0,0,0.523511883968059,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0,0,0,0,0,0,0.187283014939765,0,0.0574354689556133,0,0,0,0,0,0.342869252385415,0.354951612318675,0,0,0,0.0846146078916765,0,0,0,0,0,0.0985044823755635,0,0.154936841185966,0,0,0,0,0.191288332068843,0,0|short_description=p7@Phox2b}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:18935 | |||
|HGNC= | |||
|MCL_coexpression_id=107 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:O35690 | |||
|association_with_transcript=81bp_to_ENSMUST00000012664_5end | |||
|cluster_id=chr5:67490447..67490458,- | |||
|description=CAGE_peak_7_at_Phox2b_5end | |||
|id=chr5:67490447..67490458,- | |||
|ontology_enrichment_celltype=CL:0000107!1.41e-19!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000107,3.71e-57,9;CL:0000540,5.34e-15,33;CL:0000047,5.34e-15,33;CL:0000031,5.34e-15,33;CL:0000404,5.34e-15,33;CL:0000393,1.51e-12,39;CL:0000211,1.51e-12,39;CL:0002319,2.73e-11,43;CL:0000221,5.19e-11,44;CL:0000133,5.19e-11,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002342!3.60e-20!10;UBERON:0005062!3.60e-20!10;UBERON:0002410!1.41e-19!9;UBERON:0000010!1.27e-15!11;UBERON:0002369!2.50e-14!7;UBERON:0006858!2.50e-14!7;UBERON:0003064!2.50e-08!14;UBERON:0000011!9.88e-08!3;UBERON:0000013!1.26e-07!3;UBERON:0002005!2.13e-07!3;UBERON:0005428!2.13e-07!3;UBERON:0005157!2.98e-07!27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002410,3.71e-57,9;UBERON:0000010,1.21e-46,11;UBERON:0000011,1.65e-20,3;UBERON:0000013,3.45e-20,3;UBERON:0010313,1.72e-19,3;UBERON:0002342,1.72e-19,3;UBERON:0002005,1.72e-19,3;UBERON:0005428,1.72e-19,3;UBERON:0005062,1.72e-19,3;UBERON:0002369,3.45e-14,7;UBERON:0006858,3.45e-14,7;UBERON:0003064,3.22e-07,14 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279182999001381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.63286352971307,1.38788261412909,1.21786191324856,0.922461989024234,1.50722640552623,0.705532242814229,0.879666139307728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062129805349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.853153002140936,0.696710015581316,0.38660238396628,0,0.667134131534611,0,0,0.164698954724011,0,0,0.19496408711912,0,0.216138049874694,0,0,0.342745537829186,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.35163505977661,0,0,3.47059041357882,2.73307121007647,4.30846795465598,8.60287672629187,8.02075226696619,7.07691326972081,7.2865926301481,7.59865230569411,6.7198922250909,0,0,0,0,0,0,0.242780636154981,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790839983952838,1.01659733563424,0.540026704109006,0.418176592028937,0,0,0,0.523511883968059,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0,0,0,0,0,0,0.187283014939765,0,0.0574354689556133,0,0,0,0,0,0.342869252385415,0.354951612318675,0,0,0,0.0846146078916765,0,0,0,0,0,0.0985044823755635,0,0.154936841185966,0,0,0,0,0.191288332068843,0,0 | |||
|short_description=p7@Phox2b | |||
}} |
Revision as of 13:34, 4 August 2015
Short description: | p7@Phox2b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Phox2b_5end |
Coexpression cluster: | MCL_coexpression_mm9:107 |
Association with transcript: | 81bp_to_ENSMUST00000012664_5end |
EntrezGene: | 18935 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 3.71e-57 | 9 |
neuron | 5.34e-15 | 33 |
neuronal stem cell | 5.34e-15 | 33 |
neuroblast | 5.34e-15 | 33 |
electrically signaling cell | 5.34e-15 | 33 |
electrically responsive cell | 1.51e-12 | 39 |
electrically active cell | 1.51e-12 | 39 |
neural cell | 2.73e-11 | 43 |
ectodermal cell | 5.19e-11 | 44 |
neurectodermal cell | 5.19e-11 | 44 |
Ontology term | p-value | n |
---|---|---|
autonomic nervous system | 3.71e-57 | 9 |
peripheral nervous system | 1.21e-46 | 11 |
parasympathetic nervous system | 1.65e-20 | 3 |
sympathetic nervous system | 3.45e-20 | 3 |
neural crest-derived structure | 1.72e-19 | 3 |
neural crest | 1.72e-19 | 3 |
enteric nervous system | 1.72e-19 | 3 |
vagal neural crest | 1.72e-19 | 3 |
neural fold | 1.72e-19 | 3 |
adrenal gland | 3.45e-14 | 7 |
adrenal/interrenal gland | 3.45e-14 | 7 |
intermediate mesoderm | 3.22e-07 | 14 |