FFCP PHASE1:Mm9::chr12:100880892..100880902,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=18 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:100880892..100880902,- | |||
|description=CAGE_peak_at_chr12:100880892..100880902,- | |description=CAGE_peak_at_chr12:100880892..100880902,- | ||
|id=chr12:100880892..100880902,- | |id=chr12:100880892..100880902,- | ||
|ontology_enrichment_celltype=CL:0000553!3.19e-22!6;CL:0000556!3.19e-22!6;CL:0000050!1.29e-14!9;CL:0002031!7.28e-13!25;CL:0000414!7.62e-12!11;CL:0002027!1.15e-11!3;CL:0002006!1.15e-11!3;CL:0002024!1.15e-11!3;CL:0000839!6.36e-10!13;CL:0000988!1.17e-09!32;CL:0002032!1.17e-09!32;CL:0000037!1.17e-09!32;CL:0000566!1.17e-09!32;CL:0000837!1.17e-09!32;CL:0000763!6.13e-08!16 | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,1.19e-45,6;CL:0000556,1.19e-45,6;CL:0000050,1.34e-30,9;CL:0000839,2.61e-21,13;CL:0000763,2.23e-17,16;CL:0002031,5.87e-16,25;CL:0002027,2.85e-15,3;CL:0002006,2.85e-15,3;CL:0002024,2.85e-15,3;CL:0000049,1.11e-14,19;CL:0000945,1.55e-12,1;CL:0000236,1.55e-12,1;CL:0000826,1.55e-12,1;CL:0000988,1.71e-12,32;CL:0002032,1.71e-12,32;CL:0000037,1.71e-12,32;CL:0000837,1.71e-12,32;CL:0002320,1.05e-08,46;CL:0000134,1.05e-08,46;CL:0000219,2.06e-07,54 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!6.74e-12!48;UBERON:0002390!6.65e-11!45;UBERON:0003061!6.65e-11!45;UBERON:0003081!1.67e-09!88;UBERON:0002371!6.13e-08!16;UBERON:0001474!2.13e-07!22;UBERON:0004765!2.13e-07!22;UBERON:0001434!2.13e-07!22;UBERON:0002405!2.65e-07!70 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.23e-17,16;UBERON:0001474,1.02e-12,22;UBERON:0004765,1.02e-12,22;UBERON:0001434,1.02e-12,22;UBERON:0000029,4.30e-12,1;UBERON:0001097,4.30e-12,1;UBERON:0003968,4.30e-12,1;UBERON:0001467,4.30e-12,1;UBERON:0002193,3.87e-11,48;UBERON:0002405,3.87e-11,48;UBERON:0002390,7.94e-09,45;UBERON:0003061,7.94e-09,45;UBERON:0002204,8.29e-09,32;UBERON:0002384,1.05e-08,46 | |||
|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0.563154888606667,0,0.171217968225505,0,0,0,1.33243904726265,0.809901069559304,2.09868563438444,2.68142840554502,3.15363197293199,3.81950686618227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0,0,0,0.683045484958446,0,0,0,0,0,0,0,0,0,0,3.52343472721246,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.8125651855302,0,0,0,0,0,0,0,0.741584903203122,0,0,0,0.220841518460394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70870880797853,0,0,0,0.820165366326151,0.228778173206523,0,0.139951452323658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0.563154888606667,0,0.171217968225505,0,0,0,1.33243904726265,0.809901069559304,2.09868563438444,2.68142840554502,3.15363197293199,3.81950686618227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0,0,0,0.683045484958446,0,0,0,0,0,0,0,0,0,0,3.52343472721246,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.8125651855302,0,0,0,0,0,0,0,0.741584903203122,0,0,0,0.220841518460394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70870880797853,0,0,0,0.820165366326151,0.228778173206523,0,0.139951452323658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr12:100880892..100880902,- | |short_description=p@chr12:100880892..100880902,- | ||
}} | }} |
Latest revision as of 13:54, 4 August 2015
Short description: | p@chr12:100880892..100880902, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:100880892..100880902, - |
Coexpression cluster: | MCL_coexpression_mm9:18 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 1.19e-45 | 6 |
megakaryocyte | 1.19e-45 | 6 |
megakaryocyte-erythroid progenitor cell | 1.34e-30 | 9 |
myeloid lineage restricted progenitor cell | 2.61e-21 | 13 |
myeloid cell | 2.23e-17 | 16 |
hematopoietic lineage restricted progenitor cell | 5.87e-16 | 25 |
CD9-positive, CD41-positive megakaryocyte cell | 2.85e-15 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 2.85e-15 | 3 |
Kit-positive megakaryocyte progenitor cell | 2.85e-15 | 3 |
common myeloid progenitor | 1.11e-14 | 19 |
lymphocyte of B lineage | 1.55e-12 | 1 |
B cell | 1.55e-12 | 1 |
pro-B cell | 1.55e-12 | 1 |
hematopoietic cell | 1.71e-12 | 32 |
hematopoietic oligopotent progenitor cell | 1.71e-12 | 32 |
hematopoietic stem cell | 1.71e-12 | 32 |
hematopoietic multipotent progenitor cell | 1.71e-12 | 32 |
connective tissue cell | 1.05e-08 | 46 |
mesenchymal cell | 1.05e-08 | 46 |
motile cell | 2.06e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.23e-17 | 16 |
bone element | 1.02e-12 | 22 |
skeletal element | 1.02e-12 | 22 |
skeletal system | 1.02e-12 | 22 |
lymph node | 4.30e-12 | 1 |
axillary lymph node | 4.30e-12 | 1 |
peripheral lymph node | 4.30e-12 | 1 |
shoulder | 4.30e-12 | 1 |
hemolymphoid system | 3.87e-11 | 48 |
immune system | 3.87e-11 | 48 |
hematopoietic system | 7.94e-09 | 45 |
blood island | 7.94e-09 | 45 |
musculoskeletal system | 8.29e-09 | 32 |
connective tissue | 1.05e-08 | 46 |