FFCP PHASE1:Mm9::chr10:67110183..67110195,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=6|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:67110183..67110195,+|id=chr10:67110183..67110195,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002476,6.10e-20,2;CL:0002194,1.76e-10,4;CL:0000766,1.76e-10,4;CL:0000234,1.76e-10,4;CL:0000576,1.76e-10,4;CL:0000235,1.76e-10,4;CL:0000864,1.76e-10,4;CL:0002009,1.76e-10,4;CL:0000040,1.76e-10,4;CL:0000559,1.76e-10,4;CL:0000355,2.07e-10,9|ontology_enrichment_disease=DOID:0060100!7.60e-07!3;DOID:4045!7.60e-07!3|ontology_enrichment_disease_v019_2=DOID:0060100,8.94e-30,3;DOID:4045,8.94e-30,3;DOID:0050686,2.80e-15,6|ontology_enrichment_uberon=UBERON:0002390!2.49e-11!45;UBERON:0003061!2.49e-11!45;UBERON:0002193!2.79e-10!48;UBERON:0002371!1.41e-09!16;UBERON:0002204!1.77e-09!32;UBERON:0001474!2.81e-09!22;UBERON:0004765!2.81e-09!22;UBERON:0001434!2.81e-09!22|ontology_enrichment_uberon_v019_2=UBERON:0002204,8.45e-11,32;UBERON:0001134,2.07e-10,9;UBERON:0002036,2.07e-10,9;UBERON:0002385,2.07e-10,9;UBERON:0000486,2.07e-10,9;UBERON:0007503,2.07e-10,9;UBERON:0001015,2.07e-10,9;UBERON:0002329,2.07e-10,9;UBERON:0003082,2.07e-10,9;UBERON:0003059,2.07e-10,9;UBERON:0007282,2.07e-10,9;UBERON:0004290,2.07e-10,9;UBERON:0009618,2.07e-10,9;UBERON:0000383,1.97e-09,10;UBERON:0007524,1.25e-08,11;UBERON:0003077,1.25e-08,11;UBERON:0007285,1.25e-08,11|phase1_expression=0,0,0,0,0,0,0,0,0.140788722151667,0.234064526321993,0,0,0.171200729931206,0.0874204024189974,0,0.404950534779652,0.699561878128147,0.473193248037357,0.137114433605739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.95210098400125,3.906676722619,3.14114246384279,22.9410280332096,10.9287277593351,14.5653105909346,0,0,0,0,0,0,0,0,0,0.671130424230945,0,0,0,0,0,0,0,0,0,0,0.449949858640699,1.97773272513395,0.7104801149461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56276261003168,0,0.294628585473668,0,0,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485300549842228,0.220841518460394,0,0,0,0,0,0,0.599902730993408,0,0,0,0,0,0,0,0,0,0.497627882440372,0,0,0,0,0,0,0,0,0,0,0,0.189106080167819,0,0,0,0,0,0,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0.369506380333209,0,0,0,0,0,0,0.195133647857799,0.157635144106191,0.221464689648775,0,0.327726629431476,0,0.578596234326046,3.01582567878545,2.17562273527484,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0,0,0,0.120625849856312,0,0,0,0,0.683483523191411,0,0.555583582109135,0,0.136694227721025,0.228778173206523,0,0.139951452323658,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295379054349154,0,0,0,0,0.192423683280659,0.116876902181569,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115884325944855,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0,0,0,0.231867835620421|short_description=p@chr10:67110183..67110195,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=6 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr10:67110183..67110195,+ | |||
|description=CAGE_peak_at_chr10:67110183..67110195,+ | |||
|id=chr10:67110183..67110195,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002476,6.10e-20,2;CL:0002194,1.76e-10,4;CL:0000766,1.76e-10,4;CL:0000234,1.76e-10,4;CL:0000576,1.76e-10,4;CL:0000235,1.76e-10,4;CL:0000864,1.76e-10,4;CL:0002009,1.76e-10,4;CL:0000040,1.76e-10,4;CL:0000559,1.76e-10,4;CL:0000355,2.07e-10,9 | |||
|ontology_enrichment_disease=DOID:0060100!7.60e-07!3;DOID:4045!7.60e-07!3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,8.94e-30,3;DOID:4045,8.94e-30,3;DOID:0050686,2.80e-15,6 | |||
|ontology_enrichment_uberon=UBERON:0002390!2.49e-11!45;UBERON:0003061!2.49e-11!45;UBERON:0002193!2.79e-10!48;UBERON:0002371!1.41e-09!16;UBERON:0002204!1.77e-09!32;UBERON:0001474!2.81e-09!22;UBERON:0004765!2.81e-09!22;UBERON:0001434!2.81e-09!22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,8.45e-11,32;UBERON:0001134,2.07e-10,9;UBERON:0002036,2.07e-10,9;UBERON:0002385,2.07e-10,9;UBERON:0000486,2.07e-10,9;UBERON:0007503,2.07e-10,9;UBERON:0001015,2.07e-10,9;UBERON:0002329,2.07e-10,9;UBERON:0003082,2.07e-10,9;UBERON:0003059,2.07e-10,9;UBERON:0007282,2.07e-10,9;UBERON:0004290,2.07e-10,9;UBERON:0009618,2.07e-10,9;UBERON:0000383,1.97e-09,10;UBERON:0007524,1.25e-08,11;UBERON:0003077,1.25e-08,11;UBERON:0007285,1.25e-08,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.140788722151667,0.234064526321993,0,0,0.171200729931206,0.0874204024189974,0,0.404950534779652,0.699561878128147,0.473193248037357,0.137114433605739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.95210098400125,3.906676722619,3.14114246384279,22.9410280332096,10.9287277593351,14.5653105909346,0,0,0,0,0,0,0,0,0,0.671130424230945,0,0,0,0,0,0,0,0,0,0,0.449949858640699,1.97773272513395,0.7104801149461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56276261003168,0,0.294628585473668,0,0,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485300549842228,0.220841518460394,0,0,0,0,0,0,0.599902730993408,0,0,0,0,0,0,0,0,0,0.497627882440372,0,0,0,0,0,0,0,0,0,0,0,0.189106080167819,0,0,0,0,0,0,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0.369506380333209,0,0,0,0,0,0,0.195133647857799,0.157635144106191,0.221464689648775,0,0.327726629431476,0,0.578596234326046,3.01582567878545,2.17562273527484,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0,0,0,0.120625849856312,0,0,0,0,0.683483523191411,0,0.555583582109135,0,0.136694227721025,0.228778173206523,0,0.139951452323658,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295379054349154,0,0,0,0,0.192423683280659,0.116876902181569,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115884325944855,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0,0,0,0.231867835620421 | |||
|short_description=p@chr10:67110183..67110195,+ | |||
}} |
Latest revision as of 15:04, 4 August 2015
Short description: | p@chr10:67110183..67110195, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:67110183..67110195, + |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow macrophage | 6.10e-20 | 2 |
monopoietic cell | 1.76e-10 | 4 |
myeloid leukocyte | 1.76e-10 | 4 |
phagocyte | 1.76e-10 | 4 |
monocyte | 1.76e-10 | 4 |
macrophage | 1.76e-10 | 4 |
tissue-resident macrophage | 1.76e-10 | 4 |
macrophage dendritic cell progenitor | 1.76e-10 | 4 |
monoblast | 1.76e-10 | 4 |
promonocyte | 1.76e-10 | 4 |
multi-potent skeletal muscle stem cell | 2.07e-10 | 9 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 8.45e-11 | 32 |
skeletal muscle tissue | 2.07e-10 | 9 |
striated muscle tissue | 2.07e-10 | 9 |
muscle tissue | 2.07e-10 | 9 |
multilaminar epithelium | 2.07e-10 | 9 |
epithelial vesicle | 2.07e-10 | 9 |
musculature | 2.07e-10 | 9 |
somite | 2.07e-10 | 9 |
myotome | 2.07e-10 | 9 |
presomitic mesoderm | 2.07e-10 | 9 |
presumptive segmental plate | 2.07e-10 | 9 |
dermomyotome | 2.07e-10 | 9 |
trunk paraxial mesoderm | 2.07e-10 | 9 |
musculature of body | 1.97e-09 | 10 |
dense mesenchyme tissue | 1.25e-08 | 11 |
paraxial mesoderm | 1.25e-08 | 11 |
presumptive paraxial mesoderm | 1.25e-08 | 11 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 8.94e-30 | 3 |
muscle cancer | 8.94e-30 | 3 |
organ system cancer | 2.80e-15 | 6 |