FFCP PHASE1:Mm9::chr14:65036638..65036670,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1342|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr14:65036638..65036670,-|id=chr14:65036638..65036670,-|ontology_enrichment_celltype=CL:0000117!4.83e-11!23;CL:0000337!4.83e-11!23;CL:0000540!3.10e-07!33;CL:0000047!3.10e-07!33;CL:0000031!3.10e-07!33;CL:0000404!3.10e-07!33|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002020!2.51e-21!34;UBERON:0001049!1.36e-19!52;UBERON:0005068!1.36e-19!52;UBERON:0006241!1.36e-19!52;UBERON:0007135!1.36e-19!52;UBERON:0002791!3.61e-19!29;UBERON:0003528!3.61e-19!29;UBERON:0001893!3.61e-19!29;UBERON:0000955!2.26e-18!50;UBERON:0006238!2.26e-18!50;UBERON:0002616!1.81e-17!49;UBERON:0001017!5.97e-17!73;UBERON:0005743!5.97e-17!73;UBERON:0000073!4.66e-16!75;UBERON:0001016!4.66e-16!75;UBERON:0003080!2.25e-15!40;UBERON:0002780!4.08e-15!39;UBERON:0001890!4.08e-15!39;UBERON:0006240!4.08e-15!39;UBERON:0000956!2.09e-14!21;UBERON:0001869!2.09e-14!21;UBERON:0000203!2.09e-14!21;UBERON:0002346!2.55e-13!71;UBERON:0003075!2.55e-13!71;UBERON:0007284!2.55e-13!71;UBERON:0000033!8.08e-12!63;UBERON:0002021!6.04e-11!10;UBERON:0000411!6.04e-11!10;UBERON:0001950!6.04e-11!10;UBERON:0002619!7.26e-11!17;UBERON:0003056!1.44e-10!49;UBERON:0004121!1.29e-09!102;UBERON:0000924!1.29e-09!102;UBERON:0006601!1.29e-09!102|ontology_enrichment_uberon_v019_2=UBERON:0003528,2.89e-24,29;UBERON:0002791,2.89e-24,29;UBERON:0001893,2.89e-24,29;UBERON:0000956,5.46e-24,21;UBERON:0001869,5.46e-24,21;UBERON:0000203,5.46e-24,21;UBERON:0000955,1.17e-20,47;UBERON:0006238,1.17e-20,47;UBERON:0002780,1.01e-19,39;UBERON:0001890,1.01e-19,39;UBERON:0006240,1.01e-19,39;UBERON:0002020,1.01e-19,34;UBERON:0002616,2.47e-19,46;UBERON:0003080,4.74e-19,40;UBERON:0002619,4.68e-18,17;UBERON:0000073,5.32e-18,54;UBERON:0002021,4.37e-17,10;UBERON:0000411,4.37e-17,10;UBERON:0001950,4.37e-17,10;UBERON:0001049,3.19e-16,52;UBERON:0005068,3.19e-16,52;UBERON:0006241,3.19e-16,52;UBERON:0007135,3.19e-16,52;UBERON:0003056,2.85e-14,49;UBERON:0001017,1.83e-12,73;UBERON:0001016,6.43e-12,75;UBERON:0002346,8.58e-12,64;UBERON:0003075,8.58e-12,64;UBERON:0007284,8.58e-12,64;UBERON:0010371,1.84e-09,73;UBERON:0004121,8.73e-08,95;UBERON:0000924,8.73e-08,95;UBERON:0006601,8.73e-08,95|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0,2.7996195323289,5.26523159493594,3.78584930432488,0.285650984403804,0.441737081903227,2.20483438586917,1.34183659425531,0,0,1.27687338085188,1.68967186581868,0.263772575460388,0.182975287204819,1.04182674111352,0.837548997004143,0.56276261003168,1.83357897332172,0.589257170947335,0.569486723196412,0.186399445825301,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0.150722640552623,0.117588707135705,0,0,0,0,0,0,0,0,31.6203260772471,23.0391377494801,0,0,0,0,0.149790639404823,4.11750542536764,4.77486538028885,6.25767552692195,7.41574826257959,1.24672826735736,3.0825839982874,0.101839363850316,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175951124163949,0,0.278047249225598,0,0,0,0,0,0,0.207125772535502,0,0.180062061461015,0,0.590292695242212,0,0,0,0,0,0,0,0,0,0,13.8791366052324,33.2381897985089,0,0,0,0,0,0.403367049246685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325929952884052,0.169745085775188,0,0,0,0,0,0.221464689648775,0,0,0,0,0,0,0,0,0.321101179975584,0.468846746368813,0,0,0.315508219416257,0,0.215423397732799,0,0,0,0,0,0,8.03303291054518,0,0,0.162886959353576,0,0,0,0,0.188605079755898,0.295301892880773,0,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0,0,0,0,0.220528398054962,0,0,0.0603129249281559,0.119372344003136,0,0,0.370850604021019,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0,0.108005340821801,0.209088296014469,0,0.134864346384821,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.501572104035363,7.34177395402186,9.20650473014354,9.73922372846974,14.0919609521824,2.74033007908257,3.7769694869485,5.40018000185445,6.30449684513909,5.89085131679466,4.65984280576638,0,0,0.341467211508268,0.729320151204882,0.419226325255965,0.551530525350042,1.33348036680969,2.26638562962784,0.320919209591815,1.26348605881899,2.28131369901216,1.50901073108861,1.87283014939765,1.72867911493147,1.60819313075717,1.90517476513229,1.62238056322798,1.35036454324594,1.23625770240992,2.06078488188156,2.40008476669791,1.59728225543404,2.14592570952589,2.0348498328526,2.1645157495526,1.69229215783353,2.0122077016005,1.8414879800649,1.7654534799962,1.68342681497322,0.711810108745045,0.886540341380071,0.409231043169689,1.39443157067369,1.15743966588685,3.99696924700713,1.40358965067245,1.71896843238639,0,0,0|short_description=p@chr14:65036638..65036670,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1342 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr14:65036638..65036670,- | |||
|description=CAGE_peak_at_chr14:65036638..65036670,- | |||
|id=chr14:65036638..65036670,- | |||
|ontology_enrichment_celltype=CL:0000117!4.83e-11!23;CL:0000337!4.83e-11!23;CL:0000540!3.10e-07!33;CL:0000047!3.10e-07!33;CL:0000031!3.10e-07!33;CL:0000404!3.10e-07!33 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!2.51e-21!34;UBERON:0001049!1.36e-19!52;UBERON:0005068!1.36e-19!52;UBERON:0006241!1.36e-19!52;UBERON:0007135!1.36e-19!52;UBERON:0002791!3.61e-19!29;UBERON:0003528!3.61e-19!29;UBERON:0001893!3.61e-19!29;UBERON:0000955!2.26e-18!50;UBERON:0006238!2.26e-18!50;UBERON:0002616!1.81e-17!49;UBERON:0001017!5.97e-17!73;UBERON:0005743!5.97e-17!73;UBERON:0000073!4.66e-16!75;UBERON:0001016!4.66e-16!75;UBERON:0003080!2.25e-15!40;UBERON:0002780!4.08e-15!39;UBERON:0001890!4.08e-15!39;UBERON:0006240!4.08e-15!39;UBERON:0000956!2.09e-14!21;UBERON:0001869!2.09e-14!21;UBERON:0000203!2.09e-14!21;UBERON:0002346!2.55e-13!71;UBERON:0003075!2.55e-13!71;UBERON:0007284!2.55e-13!71;UBERON:0000033!8.08e-12!63;UBERON:0002021!6.04e-11!10;UBERON:0000411!6.04e-11!10;UBERON:0001950!6.04e-11!10;UBERON:0002619!7.26e-11!17;UBERON:0003056!1.44e-10!49;UBERON:0004121!1.29e-09!102;UBERON:0000924!1.29e-09!102;UBERON:0006601!1.29e-09!102 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003528,2.89e-24,29;UBERON:0002791,2.89e-24,29;UBERON:0001893,2.89e-24,29;UBERON:0000956,5.46e-24,21;UBERON:0001869,5.46e-24,21;UBERON:0000203,5.46e-24,21;UBERON:0000955,1.17e-20,47;UBERON:0006238,1.17e-20,47;UBERON:0002780,1.01e-19,39;UBERON:0001890,1.01e-19,39;UBERON:0006240,1.01e-19,39;UBERON:0002020,1.01e-19,34;UBERON:0002616,2.47e-19,46;UBERON:0003080,4.74e-19,40;UBERON:0002619,4.68e-18,17;UBERON:0000073,5.32e-18,54;UBERON:0002021,4.37e-17,10;UBERON:0000411,4.37e-17,10;UBERON:0001950,4.37e-17,10;UBERON:0001049,3.19e-16,52;UBERON:0005068,3.19e-16,52;UBERON:0006241,3.19e-16,52;UBERON:0007135,3.19e-16,52;UBERON:0003056,2.85e-14,49;UBERON:0001017,1.83e-12,73;UBERON:0001016,6.43e-12,75;UBERON:0002346,8.58e-12,64;UBERON:0003075,8.58e-12,64;UBERON:0007284,8.58e-12,64;UBERON:0010371,1.84e-09,73;UBERON:0004121,8.73e-08,95;UBERON:0000924,8.73e-08,95;UBERON:0006601,8.73e-08,95 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0,2.7996195323289,5.26523159493594,3.78584930432488,0.285650984403804,0.441737081903227,2.20483438586917,1.34183659425531,0,0,1.27687338085188,1.68967186581868,0.263772575460388,0.182975287204819,1.04182674111352,0.837548997004143,0.56276261003168,1.83357897332172,0.589257170947335,0.569486723196412,0.186399445825301,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0.150722640552623,0.117588707135705,0,0,0,0,0,0,0,0,31.6203260772471,23.0391377494801,0,0,0,0,0.149790639404823,4.11750542536764,4.77486538028885,6.25767552692195,7.41574826257959,1.24672826735736,3.0825839982874,0.101839363850316,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175951124163949,0,0.278047249225598,0,0,0,0,0,0,0.207125772535502,0,0.180062061461015,0,0.590292695242212,0,0,0,0,0,0,0,0,0,0,13.8791366052324,33.2381897985089,0,0,0,0,0,0.403367049246685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325929952884052,0.169745085775188,0,0,0,0,0,0.221464689648775,0,0,0,0,0,0,0,0,0.321101179975584,0.468846746368813,0,0,0.315508219416257,0,0.215423397732799,0,0,0,0,0,0,8.03303291054518,0,0,0.162886959353576,0,0,0,0,0.188605079755898,0.295301892880773,0,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0,0,0,0,0.220528398054962,0,0,0.0603129249281559,0.119372344003136,0,0,0.370850604021019,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0,0.108005340821801,0.209088296014469,0,0.134864346384821,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.501572104035363,7.34177395402186,9.20650473014354,9.73922372846974,14.0919609521824,2.74033007908257,3.7769694869485,5.40018000185445,6.30449684513909,5.89085131679466,4.65984280576638,0,0,0.341467211508268,0.729320151204882,0.419226325255965,0.551530525350042,1.33348036680969,2.26638562962784,0.320919209591815,1.26348605881899,2.28131369901216,1.50901073108861,1.87283014939765,1.72867911493147,1.60819313075717,1.90517476513229,1.62238056322798,1.35036454324594,1.23625770240992,2.06078488188156,2.40008476669791,1.59728225543404,2.14592570952589,2.0348498328526,2.1645157495526,1.69229215783353,2.0122077016005,1.8414879800649,1.7654534799962,1.68342681497322,0.711810108745045,0.886540341380071,0.409231043169689,1.39443157067369,1.15743966588685,3.99696924700713,1.40358965067245,1.71896843238639,0,0,0 | |||
|short_description=p@chr14:65036638..65036670,- | |||
}} |
Latest revision as of 15:39, 4 August 2015
Short description: | p@chr14:65036638..65036670, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr14:65036638..65036670, - |
Coexpression cluster: | MCL_coexpression_mm9:1342 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brain grey matter | 2.89e-24 | 29 |
regional part of telencephalon | 2.89e-24 | 29 |
telencephalon | 2.89e-24 | 29 |
cerebral cortex | 5.46e-24 | 21 |
cerebral hemisphere | 5.46e-24 | 21 |
pallium | 5.46e-24 | 21 |
brain | 1.17e-20 | 47 |
future brain | 1.17e-20 | 47 |
regional part of forebrain | 1.01e-19 | 39 |
forebrain | 1.01e-19 | 39 |
future forebrain | 1.01e-19 | 39 |
gray matter | 1.01e-19 | 34 |
regional part of brain | 2.47e-19 | 46 |
anterior neural tube | 4.74e-19 | 40 |
regional part of cerebral cortex | 4.68e-18 | 17 |
regional part of nervous system | 5.32e-18 | 54 |
occipital lobe | 4.37e-17 | 10 |
visual cortex | 4.37e-17 | 10 |
neocortex | 4.37e-17 | 10 |
neural tube | 3.19e-16 | 52 |
neural rod | 3.19e-16 | 52 |
future spinal cord | 3.19e-16 | 52 |
neural keel | 3.19e-16 | 52 |
pre-chordal neural plate | 2.85e-14 | 49 |
central nervous system | 1.83e-12 | 73 |
nervous system | 6.43e-12 | 75 |
neurectoderm | 8.58e-12 | 64 |
neural plate | 8.58e-12 | 64 |
presumptive neural plate | 8.58e-12 | 64 |
ecto-epithelium | 1.84e-09 | 73 |
ectoderm-derived structure | 8.73e-08 | 95 |
ectoderm | 8.73e-08 | 95 |
presumptive ectoderm | 8.73e-08 | 95 |