FFCP PHASE1:Mm9::chr14:65059503..65059557,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr14:65059503..65059557,+ to FFCP PHASE1:Mm9::chr14:65059503..65059557,+: NSchange) |
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(6 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=6 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr14:65059503..65059557,+ | |||
|description=CAGE_peak_at_chr14:65059503..65059557,+ | |||
|id=chr14:65059503..65059557,+ | |||
|ontology_enrichment_celltype=CL:0000723!2.51e-13!91;CL:0000048!2.51e-13!91;CL:0000034!1.11e-12!97;CL:0000144!2.88e-09!121;CL:0000012!2.88e-09!121;CL:0000540!6.22e-09!33;CL:0000047!6.22e-09!33;CL:0000031!6.22e-09!33;CL:0000404!6.22e-09!33;CL:0002371!1.65e-08!118;CL:0000117!6.78e-08!23;CL:0000337!6.78e-08!23;CL:0002319!2.20e-07!43;CL:0000548!2.74e-07!115;CL:0000004!2.74e-07!115;CL:0000255!2.74e-07!115;CL:0000221!3.78e-07!44;CL:0000133!3.78e-07!44;CL:0000988!7.50e-07!32;CL:0002032!7.50e-07!32;CL:0000037!7.50e-07!32;CL:0000566!7.50e-07!32;CL:0000837!7.50e-07!32;CL:0000393!9.81e-07!39;CL:0000211!9.81e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000723,1.38e-16,91;CL:0000048,1.38e-16,91;CL:0000034,3.76e-16,97;CL:0000540,1.29e-09,33;CL:0000047,1.29e-09,33;CL:0000031,1.29e-09,33;CL:0000404,1.29e-09,33;CL:0000117,9.96e-09,23;CL:0000337,9.96e-09,23;CL:0000988,3.97e-08,32;CL:0002032,3.97e-08,32;CL:0000037,3.97e-08,32;CL:0000837,3.97e-08,32;CL:0000393,8.35e-08,39;CL:0000211,8.35e-08,39;CL:0002319,1.28e-07,43;CL:0000221,3.68e-07,44;CL:0000133,3.68e-07,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.59e-16!73;UBERON:0005743!2.59e-16!73;UBERON:0002346!4.55e-15!71;UBERON:0003075!4.55e-15!71;UBERON:0007284!4.55e-15!71;UBERON:0000073!9.69e-15!75;UBERON:0001016!9.69e-15!75;UBERON:0003056!3.55e-14!49;UBERON:0000033!7.34e-14!63;UBERON:0000955!3.08e-13!50;UBERON:0006238!3.08e-13!50;UBERON:0002616!5.54e-13!49;UBERON:0001049!7.75e-13!52;UBERON:0005068!7.75e-13!52;UBERON:0006241!7.75e-13!52;UBERON:0007135!7.75e-13!52;UBERON:0002780!3.40e-12!39;UBERON:0001890!3.40e-12!39;UBERON:0006240!3.40e-12!39;UBERON:0004121!7.83e-12!102;UBERON:0000924!7.83e-12!102;UBERON:0006601!7.83e-12!102;UBERON:0003080!1.08e-11!40;UBERON:0002020!5.48e-10!34;UBERON:0007811!1.17e-09!86;UBERON:0000153!1.47e-09!94;UBERON:0002791!2.20e-09!29;UBERON:0003528!2.20e-09!29;UBERON:0001893!2.20e-09!29;UBERON:0000956!7.82e-07!21;UBERON:0001869!7.82e-07!21;UBERON:0000203!7.82e-07!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,5.34e-16,64;UBERON:0003075,5.34e-16,64;UBERON:0007284,5.34e-16,64;UBERON:0001017,8.51e-16,73;UBERON:0001016,1.10e-14,75;UBERON:0003056,2.35e-14,49;UBERON:0000073,1.11e-13,54;UBERON:0002780,1.42e-12,39;UBERON:0001890,1.42e-12,39;UBERON:0006240,1.42e-12,39;UBERON:0004121,1.57e-12,95;UBERON:0000924,1.57e-12,95;UBERON:0006601,1.57e-12,95;UBERON:0000955,2.05e-12,47;UBERON:0006238,2.05e-12,47;UBERON:0001049,2.33e-12,52;UBERON:0005068,2.33e-12,52;UBERON:0006241,2.33e-12,52;UBERON:0007135,2.33e-12,52;UBERON:0002616,3.90e-12,46;UBERON:0003080,7.36e-12,40;UBERON:0010371,1.42e-11,73;UBERON:0002020,3.92e-10,34;UBERON:0003528,2.04e-09,29;UBERON:0002791,2.04e-09,29;UBERON:0001893,2.04e-09,29;UBERON:0010314,2.60e-07,92 | |||
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| ||
|short_description=p@chr14:65059503..65059557,+ | |||
}} | }} |
Latest revision as of 15:41, 4 August 2015
Short description: | p@chr14:65059503..65059557, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr14:65059503..65059557, + |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
somatic stem cell | 1.38e-16 | 91 |
multi fate stem cell | 1.38e-16 | 91 |
stem cell | 3.76e-16 | 97 |
neuron | 1.29e-09 | 33 |
neuronal stem cell | 1.29e-09 | 33 |
neuroblast | 1.29e-09 | 33 |
electrically signaling cell | 1.29e-09 | 33 |
CNS neuron (sensu Vertebrata) | 9.96e-09 | 23 |
neuroblast (sensu Vertebrata) | 9.96e-09 | 23 |
hematopoietic cell | 3.97e-08 | 32 |
hematopoietic oligopotent progenitor cell | 3.97e-08 | 32 |
hematopoietic stem cell | 3.97e-08 | 32 |
hematopoietic multipotent progenitor cell | 3.97e-08 | 32 |
electrically responsive cell | 8.35e-08 | 39 |
electrically active cell | 8.35e-08 | 39 |
neural cell | 1.28e-07 | 43 |
ectodermal cell | 3.68e-07 | 44 |
neurectodermal cell | 3.68e-07 | 44 |
Ontology term | p-value | n |
---|---|---|
neurectoderm | 5.34e-16 | 64 |
neural plate | 5.34e-16 | 64 |
presumptive neural plate | 5.34e-16 | 64 |
central nervous system | 8.51e-16 | 73 |
nervous system | 1.10e-14 | 75 |
pre-chordal neural plate | 2.35e-14 | 49 |
regional part of nervous system | 1.11e-13 | 54 |
regional part of forebrain | 1.42e-12 | 39 |
forebrain | 1.42e-12 | 39 |
future forebrain | 1.42e-12 | 39 |
ectoderm-derived structure | 1.57e-12 | 95 |
ectoderm | 1.57e-12 | 95 |
presumptive ectoderm | 1.57e-12 | 95 |
brain | 2.05e-12 | 47 |
future brain | 2.05e-12 | 47 |
neural tube | 2.33e-12 | 52 |
neural rod | 2.33e-12 | 52 |
future spinal cord | 2.33e-12 | 52 |
neural keel | 2.33e-12 | 52 |
regional part of brain | 3.90e-12 | 46 |
anterior neural tube | 7.36e-12 | 40 |
ecto-epithelium | 1.42e-11 | 73 |
gray matter | 3.92e-10 | 34 |
brain grey matter | 2.04e-09 | 29 |
regional part of telencephalon | 2.04e-09 | 29 |
telencephalon | 2.04e-09 | 29 |
structure with developmental contribution from neural crest | 2.60e-07 | 92 |