FFCP PHASE1:Mm9::chr2:174167312..174167369,+: Difference between revisions
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{{FFCP|EntrezGene=14683|HGNC=|MCL_coexpression_id=989|UniProt=|association_with_transcript=107bp_to_ENSMUST00000131125_5end|description=CAGE_peak_5_at_Gnas_5end|id=chr2:174167312..174167369,+|ontology_enrichment_celltype=CL:0002319!2.59e-10!43;CL:0000221!6.17e-10!44;CL:0000133!6.17e-10!44;CL:0000055!1.45e-09!50;CL:0000117!6.82e-08!23;CL:0000337!6.82e-08!23;CL:0000393!9.49e-08!39;CL:0000211!9.49e-08!39;CL:0000540!1.17e-07!33;CL:0000047!1.17e-07!33;CL:0000031!1.17e-07!33;CL:0000404!1.17e-07!33|ontology_enrichment_celltype_v019_2=CL:0002319,3.73e-10,43;CL:0000221,8.80e-10,44;CL:0000133,8.80e-10,44;CL:0000117,5.89e-08,23;CL:0000337,5.89e-08,23;CL:0000393,9.65e-08,39;CL:0000211,9.65e-08,39;CL:0000540,1.21e-07,33;CL:0000047,1.21e-07,33;CL:0000031,1.21e-07,33;CL:0000404,1.21e-07,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!4.29e-17!73;UBERON:0005743!4.29e-17!73;UBERON:0000073!1.04e-15!75;UBERON:0001016!1.04e-15!75;UBERON:0004121!4.46e-14!102;UBERON:0000924!4.46e-14!102;UBERON:0006601!4.46e-14!102;UBERON:0001049!2.05e-12!52;UBERON:0005068!2.05e-12!52;UBERON:0006241!2.05e-12!52;UBERON:0007135!2.05e-12!52;UBERON:0002346!2.71e-12!71;UBERON:0003075!2.71e-12!71;UBERON:0007284!2.71e-12!71;UBERON:0002616!1.23e-11!49;UBERON:0000955!2.75e-11!50;UBERON:0006238!2.75e-11!50;UBERON:0002780!7.59e-10!39;UBERON:0001890!7.59e-10!39;UBERON:0006240!7.59e-10!39;UBERON:0003080!1.98e-09!40;UBERON:0000033!5.55e-09!63;UBERON:0002020!1.89e-08!34;UBERON:0003056!1.44e-07!49;UBERON:0002791!8.03e-07!29;UBERON:0003528!8.03e-07!29;UBERON:0001893!8.03e-07!29|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.53e-17,73;UBERON:0001016,1.63e-15,75;UBERON:0000073,1.89e-13,54;UBERON:0001049,1.98e-12,52;UBERON:0005068,1.98e-12,52;UBERON:0006241,1.98e-12,52;UBERON:0007135,1.98e-12,52;UBERON:0010314,4.22e-12,92;UBERON:0004121,8.04e-12,95;UBERON:0000924,8.04e-12,95;UBERON:0006601,8.04e-12,95;UBERON:0002346,1.86e-10,64;UBERON:0003075,1.86e-10,64;UBERON:0007284,1.86e-10,64;UBERON:0002616,2.99e-10,46;UBERON:0002780,6.28e-10,39;UBERON:0001890,6.28e-10,39;UBERON:0006240,6.28e-10,39;UBERON:0000955,6.40e-10,47;UBERON:0006238,6.40e-10,47;UBERON:0003080,1.65e-09,40;UBERON:0002020,1.61e-08,34;UBERON:0010371,3.11e-08,73;UBERON:0003056,1.57e-07,49;UBERON:0003528,7.11e-07,29;UBERON:0002791,7.11e-07,29;UBERON:0001893,7.11e-07,29|phase1_expression=1.76163731815273,1.39590163055744,1.36499771816861,0,2.00358291978539,1.17515490338323,0.700837921786577,0.645616617207881,0.985521055061667,0.936258105287974,0.513653904676515,0.717949430958028,0.171200729931206,0.699363219351979,1.66554880907831,0.607425802169478,2.79824751251259,0.946386496074713,1.09691546884591,0.42438965179803,1.27564935226605,0.595745707205312,0.261199789138935,2.07990149631429,0.91763712426868,1.14846392823004,0.86152399231815,2.15471232685889,0.760093677825496,0.756090389279792,0.665191531965914,0,0,0,0.577703239502549,0.664938581433969,0.612508068787107,0.837063261473815,0,0.523523743973798,0,0.683045484958446,0.971020706062307,2.01434908760924,2.02753862439029,1.10128051297009,10.9534788208725,5.23260375313072,5.05278220289285,7.19390626574849,6.15940255151595,7.18762821824858,0.671130424230945,2.17608642603403,0.672187598284928,3.8588915405392,4.01146815914259,3.6097046459421,3.03474691289397,6.34789175126439,4.43681982454325,5.42151251310611,0.889294796111139,3.5995988691256,2.96659908770092,2.8419204597844,6.5912024314049,8.83702102239575,3.31806759387129,3.64516033495565,2.10324961351382,3.42781181284564,4.19650227808066,2.9397791811589,2.68367318851062,1.83843757322004,4.40463523997555,6.12899222808901,5.83704826373725,4.08847491963601,5.76372154695181,3.12548022334056,7.53794097303729,6.19038871034848,5.80633341551878,7.95497180778903,3.98640706237488,3.35519002485541,0.832988126665025,0.906858721281426,2.31891590961342,0,2.03991400112325,1.61910957491345,3.89865850468601,1.79210754838934,1.82577746171277,3.74946709671727,3.63700406444016,3.88673531961374,1.54927761754349,3.84979432242953,2.54805239706646,0,4.32982082022428,3.54703811665138,6.57181778519218,1.59857431606684,0.517875767294343,1.7813056687779,6.24547176358089,4.87144765299426,4.38169444786511,4.06951129492081,4.35078216402108,2.13633205260448,3.46072954828123,4.916378135277,1.76922110389975,2.26473589926373,1.76673214768315,2.42437626567611,3.72783522436244,0.878342391034642,4.39838084308256,2.81002760729451,0.718890747035522,0,1.01656181658452,1.49790639404823,1.37250180845588,1.50785222535437,2.78118912307642,2.30143911597297,2.49345653471472,1.46017136760982,2.54598409625791,1.11966273549084,2.77995034277042,1.47309299120532,1.56144531555244,1.83921683546778,2.16074555766419,3.31550599238573,1.49680298132921,1.66547836370305,0.937017245597288,2.58703370739016,3.44908788692548,2.26927296201383,3.34307135911503,3.06874025398605,2.50242524303038,1.39300866608867,3.08673204611915,1.79130840136644,0.702213187313235,1.54408744268829,0.284163499395593,2.07125772535502,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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:14683 | |||
|HGNC= | |||
|MCL_coexpression_id=989 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=107bp_to_ENSMUST00000131125_5end | |||
|cluster_id=chr2:174167312..174167369,+ | |||
|description=CAGE_peak_5_at_Gnas_5end | |||
|id=chr2:174167312..174167369,+ | |||
|ontology_enrichment_celltype=CL:0002319!2.59e-10!43;CL:0000221!6.17e-10!44;CL:0000133!6.17e-10!44;CL:0000055!1.45e-09!50;CL:0000117!6.82e-08!23;CL:0000337!6.82e-08!23;CL:0000393!9.49e-08!39;CL:0000211!9.49e-08!39;CL:0000540!1.17e-07!33;CL:0000047!1.17e-07!33;CL:0000031!1.17e-07!33;CL:0000404!1.17e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,3.73e-10,43;CL:0000221,8.80e-10,44;CL:0000133,8.80e-10,44;CL:0000117,5.89e-08,23;CL:0000337,5.89e-08,23;CL:0000393,9.65e-08,39;CL:0000211,9.65e-08,39;CL:0000540,1.21e-07,33;CL:0000047,1.21e-07,33;CL:0000031,1.21e-07,33;CL:0000404,1.21e-07,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.29e-17!73;UBERON:0005743!4.29e-17!73;UBERON:0000073!1.04e-15!75;UBERON:0001016!1.04e-15!75;UBERON:0004121!4.46e-14!102;UBERON:0000924!4.46e-14!102;UBERON:0006601!4.46e-14!102;UBERON:0001049!2.05e-12!52;UBERON:0005068!2.05e-12!52;UBERON:0006241!2.05e-12!52;UBERON:0007135!2.05e-12!52;UBERON:0002346!2.71e-12!71;UBERON:0003075!2.71e-12!71;UBERON:0007284!2.71e-12!71;UBERON:0002616!1.23e-11!49;UBERON:0000955!2.75e-11!50;UBERON:0006238!2.75e-11!50;UBERON:0002780!7.59e-10!39;UBERON:0001890!7.59e-10!39;UBERON:0006240!7.59e-10!39;UBERON:0003080!1.98e-09!40;UBERON:0000033!5.55e-09!63;UBERON:0002020!1.89e-08!34;UBERON:0003056!1.44e-07!49;UBERON:0002791!8.03e-07!29;UBERON:0003528!8.03e-07!29;UBERON:0001893!8.03e-07!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.53e-17,73;UBERON:0001016,1.63e-15,75;UBERON:0000073,1.89e-13,54;UBERON:0001049,1.98e-12,52;UBERON:0005068,1.98e-12,52;UBERON:0006241,1.98e-12,52;UBERON:0007135,1.98e-12,52;UBERON:0010314,4.22e-12,92;UBERON:0004121,8.04e-12,95;UBERON:0000924,8.04e-12,95;UBERON:0006601,8.04e-12,95;UBERON:0002346,1.86e-10,64;UBERON:0003075,1.86e-10,64;UBERON:0007284,1.86e-10,64;UBERON:0002616,2.99e-10,46;UBERON:0002780,6.28e-10,39;UBERON:0001890,6.28e-10,39;UBERON:0006240,6.28e-10,39;UBERON:0000955,6.40e-10,47;UBERON:0006238,6.40e-10,47;UBERON:0003080,1.65e-09,40;UBERON:0002020,1.61e-08,34;UBERON:0010371,3.11e-08,73;UBERON:0003056,1.57e-07,49;UBERON:0003528,7.11e-07,29;UBERON:0002791,7.11e-07,29;UBERON:0001893,7.11e-07,29 | |||
|phase1_expression=1.76163731815273,1.39590163055744,1.36499771816861,0,2.00358291978539,1.17515490338323,0.700837921786577,0.645616617207881,0.985521055061667,0.936258105287974,0.513653904676515,0.717949430958028,0.171200729931206,0.699363219351979,1.66554880907831,0.607425802169478,2.79824751251259,0.946386496074713,1.09691546884591,0.42438965179803,1.27564935226605,0.595745707205312,0.261199789138935,2.07990149631429,0.91763712426868,1.14846392823004,0.86152399231815,2.15471232685889,0.760093677825496,0.756090389279792,0.665191531965914,0,0,0,0.577703239502549,0.664938581433969,0.612508068787107,0.837063261473815,0,0.523523743973798,0,0.683045484958446,0.971020706062307,2.01434908760924,2.02753862439029,1.10128051297009,10.9534788208725,5.23260375313072,5.05278220289285,7.19390626574849,6.15940255151595,7.18762821824858,0.671130424230945,2.17608642603403,0.672187598284928,3.8588915405392,4.01146815914259,3.6097046459421,3.03474691289397,6.34789175126439,4.43681982454325,5.42151251310611,0.889294796111139,3.5995988691256,2.96659908770092,2.8419204597844,6.5912024314049,8.83702102239575,3.31806759387129,3.64516033495565,2.10324961351382,3.42781181284564,4.19650227808066,2.9397791811589,2.68367318851062,1.83843757322004,4.40463523997555,6.12899222808901,5.83704826373725,4.08847491963601,5.76372154695181,3.12548022334056,7.53794097303729,6.19038871034848,5.80633341551878,7.95497180778903,3.98640706237488,3.35519002485541,0.832988126665025,0.906858721281426,2.31891590961342,0,2.03991400112325,1.61910957491345,3.89865850468601,1.79210754838934,1.82577746171277,3.74946709671727,3.63700406444016,3.88673531961374,1.54927761754349,3.84979432242953,2.54805239706646,0,4.32982082022428,3.54703811665138,6.57181778519218,1.59857431606684,0.517875767294343,1.7813056687779,6.24547176358089,4.87144765299426,4.38169444786511,4.06951129492081,4.35078216402108,2.13633205260448,3.46072954828123,4.916378135277,1.76922110389975,2.26473589926373,1.76673214768315,2.42437626567611,3.72783522436244,0.878342391034642,4.39838084308256,2.81002760729451,0.718890747035522,0,1.01656181658452,1.49790639404823,1.37250180845588,1.50785222535437,2.78118912307642,2.30143911597297,2.49345653471472,1.46017136760982,2.54598409625791,1.11966273549084,2.77995034277042,1.47309299120532,1.56144531555244,1.83921683546778,2.16074555766419,3.31550599238573,1.49680298132921,1.66547836370305,0.937017245597288,2.58703370739016,3.44908788692548,2.26927296201383,3.34307135911503,3.06874025398605,2.50242524303038,1.39300866608867,3.08673204611915,1.79130840136644,0.702213187313235,1.54408744268829,0.284163499395593,2.07125772535502,2.34526059981096,1.98068267607116,3.07768156260773,1.77087808572663,2.00547246753592,1.86027155800326,2.68273401399619,1.98501082024188,1.97471819896177,3.2833492815819,1.78351381000883,1.90059983652932,1.97595103761946,1.8788898626452,2.3131894342054,1.54356918568927,1.32167513193519,0.528901133327089,2.13288250535234,2.09013004674395,1.28867461322093,1.81515172161008,1.33426826306922,0.951128130562796,1.42358718463353,1.81168850196412,1.25667604400135,1.39269530428806,1.75467678407208,3.59527763461689,1.29682829924817,1.39398891278057,3.22435431620239,1.71372768914593,1.1270773567308,1.4255592949172,1.35766741017338,2.45475369616115,1.64414996523069,1.77132177575523,1.41298855057237,1.1105744752962,1.1858105083486,1.00107063429656,0.393117990226406,0,0.202860121388503,0.72353147925725,1.78238096246994,0.287696137450811,3.40483976227574,0.823684239564244,11.5014565221884,1.48856379067401,1.5601883655728,1.01031551178845,1.4351793081753,0.964887042726734,0.554259570499814,2.84237117655727,2.11854469374634,3.39490171550376,2.34690248288502,1.50755631697634,2.61848004974615,3.31727201358258,2.20689201748667,1.7717175171902,0.956728611944923,1.63863314715738,1.55416483679306,1.73578870297814,3.01582567878545,1.63171705145613,0.983528546038072,2.48343071674259,3.85321415970701,1.87538698547525,0.819674726883377,4.54447668967871,2.2085575359138,2.34263246577983,3.01592756825919,2.62865677747807,3.11918143715352,0.849229592366497,3.64329631507405,3.50707029493574,3.55759000151871,1.60660658210904,1.41940085208269,2.84904965867608,3.25773918707152,0.989820737835213,3.98235415019888,5.82673526771955,2.11626489875326,1.69744571780308,1.47650946440386,2.15204603560749,2.58428293168221,3.27180356529755,3.56497378384721,1.8962205476149,2.10837217149998,2.06271086496374,11.234506989875,2.16073312837572,3.49268446213437,7.07312215604255,9.57637261668277,12.664186049747,12.176627524557,16.745572201303,0.704015124191131,1.90648863777438,1.7642271844397,1.48397627647332,2.74489525383039,0.72375509913787,1.3130957840345,1.80554989719567,2.04036585640896,4.82105785227325,1.19609616558497,3.09580301944834,0.740778109478847,1.31857919903284,1.23024804948923,0.686334519619568,0.849892149969277,0.559805809294632,1.65839968565309,1.90934123603023,1.89801596148681,1.01659733563424,1.72808545314882,1.25452977608681,2.18362563746178,1.75323650300267,1.40510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| |||
|short_description=p5@Gnas | |||
}} |
Revision as of 16:32, 4 August 2015
Short description: | p5@Gnas |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Gnas_5end |
Coexpression cluster: | MCL_coexpression_mm9:989 |
Association with transcript: | 107bp_to_ENSMUST00000131125_5end |
EntrezGene: | 14683 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 3.73e-10 | 43 |
ectodermal cell | 8.80e-10 | 44 |
neurectodermal cell | 8.80e-10 | 44 |
CNS neuron (sensu Vertebrata) | 5.89e-08 | 23 |
neuroblast (sensu Vertebrata) | 5.89e-08 | 23 |
electrically responsive cell | 9.65e-08 | 39 |
electrically active cell | 9.65e-08 | 39 |
neuron | 1.21e-07 | 33 |
neuronal stem cell | 1.21e-07 | 33 |
neuroblast | 1.21e-07 | 33 |
electrically signaling cell | 1.21e-07 | 33 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 4.53e-17 | 73 |
nervous system | 1.63e-15 | 75 |
regional part of nervous system | 1.89e-13 | 54 |
neural tube | 1.98e-12 | 52 |
neural rod | 1.98e-12 | 52 |
future spinal cord | 1.98e-12 | 52 |
neural keel | 1.98e-12 | 52 |
structure with developmental contribution from neural crest | 4.22e-12 | 92 |
ectoderm-derived structure | 8.04e-12 | 95 |
ectoderm | 8.04e-12 | 95 |
presumptive ectoderm | 8.04e-12 | 95 |
neurectoderm | 1.86e-10 | 64 |
neural plate | 1.86e-10 | 64 |
presumptive neural plate | 1.86e-10 | 64 |
regional part of brain | 2.99e-10 | 46 |
regional part of forebrain | 6.28e-10 | 39 |
forebrain | 6.28e-10 | 39 |
future forebrain | 6.28e-10 | 39 |
brain | 6.40e-10 | 47 |
future brain | 6.40e-10 | 47 |
anterior neural tube | 1.65e-09 | 40 |
gray matter | 1.61e-08 | 34 |
ecto-epithelium | 3.11e-08 | 73 |
pre-chordal neural plate | 1.57e-07 | 49 |
brain grey matter | 7.11e-07 | 29 |
regional part of telencephalon | 7.11e-07 | 29 |
telencephalon | 7.11e-07 | 29 |