FFCP PHASE1:Mm9::chr1:129755606..129755622,-: Difference between revisions
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|id=chr1:129755606..129755622,-
|short_description=p@chr1:129755606..129755622,-
|description=CAGE_peak_at_chr1:129755606..129755622,-
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=63 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:129755606..129755622,- | |||
|description=CAGE_peak_at_chr1:129755606..129755622,- | |||
|id=chr1:129755606..129755622,- | |||
|ontology_enrichment_celltype=CL:0000553!8.97e-13!6;CL:0000556!8.97e-13!6;CL:0000050!2.23e-08!9;CL:0000414!8.92e-07!11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,1.36e-36,6;CL:0000556,1.36e-36,6;CL:0000050,1.69e-24,9;CL:0000839,4.98e-17,13;CL:0000763,7.22e-14,16;CL:0002031,1.17e-12,25;CL:0002027,1.86e-12,3;CL:0002006,1.86e-12,3;CL:0002024,1.86e-12,3;CL:0000049,1.07e-11,19;CL:0000945,2.01e-10,1;CL:0000236,2.01e-10,1;CL:0000826,2.01e-10,1;CL:0000988,7.27e-10,32;CL:0002032,7.27e-10,32;CL:0000037,7.27e-10,32;CL:0000837,7.27e-10,32;CL:0002320,8.30e-07,46;CL:0000134,8.30e-07,46 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002106!9.65e-08!6;UBERON:0004457!9.65e-08!6;UBERON:0000042!9.65e-08!6;UBERON:0004854!9.65e-08!6;UBERON:0009034!9.65e-08!6;UBERON:0002095!9.65e-08!6;UBERON:0004782!9.65e-08!6;UBERON:0003281!9.65e-08!6;UBERON:0009664!9.65e-08!6;UBERON:0002296!9.65e-08!6;UBERON:0005602!9.65e-08!6;UBERON:0001179!9.65e-08!6;UBERON:0006293!9.65e-08!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001474,2.82e-14,22;UBERON:0004765,2.82e-14,22;UBERON:0001434,2.82e-14,22;UBERON:0002371,7.22e-14,16;UBERON:0000029,1.63e-10,1;UBERON:0001097,1.63e-10,1;UBERON:0003968,1.63e-10,1;UBERON:0001467,1.63e-10,1;UBERON:0002204,8.76e-10,32;UBERON:0001044,1.03e-09,1;UBERON:0001736,1.03e-09,1;UBERON:0003293,1.03e-09,1;UBERON:0003294,1.03e-09,1;UBERON:0001829,1.03e-09,1;UBERON:0010047,1.03e-09,1;UBERON:0000167,1.03e-09,1;UBERON:0006298,1.03e-09,1;UBERON:0002193,9.61e-09,48;UBERON:0002405,9.61e-09,48;UBERON:0002390,6.77e-07,45;UBERON:0003061,6.77e-07,45;UBERON:0002384,8.30e-07,46 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.171200729931206,0,3.66420737997229,2.42970320867791,0,4.73193248037357,7.67840828192137,5.51706547337439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588231488031014,0,0,0,0,0,0,0,0,0,0,0,7.71799987865587,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.9739685754209,0.148442139064825,0,0,0,0,0,0,0,0.289198713839823,3.5384422077995,0,0.220841518460394,0,0,0,0,0,0.11981512450592,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.739012760666419,0,0,0,0,0,0,0,0,0,0,0.327726629431476,0.518054945597687,0.144649058581512,0,0,0.491764273019036,0.827810238914197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,2.73393409276564,0,0,0.376736914009382,0.820165366326151,0.228778173206523,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0.129614973291793,1.24267862617385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.171200729931206,0,3.66420737997229,2.42970320867791,0,4.73193248037357,7.67840828192137,5.51706547337439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588231488031014,0,0,0,0,0,0,0,0,0,0,0,7.71799987865587,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.9739685754209,0.148442139064825,0,0,0,0,0,0,0,0.289198713839823,3.5384422077995,0,0.220841518460394,0,0,0,0,0,0.11981512450592,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.739012760666419,0,0,0,0,0,0,0,0,0,0,0.327726629431476,0.518054945597687,0.144649058581512,0,0,0.491764273019036,0.827810238914197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,2.73393409276564,0,0,0.376736914009382,0.820165366326151,0.228778173206523,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0.129614973291793,1.24267862617385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr1:129755606..129755622,- | |||
}} | }} |
Latest revision as of 17:07, 4 August 2015
Short description: | p@chr1:129755606..129755622, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:129755606..129755622, - |
Coexpression cluster: | MCL_coexpression_mm9:63 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 1.36e-36 | 6 |
megakaryocyte | 1.36e-36 | 6 |
megakaryocyte-erythroid progenitor cell | 1.69e-24 | 9 |
myeloid lineage restricted progenitor cell | 4.98e-17 | 13 |
myeloid cell | 7.22e-14 | 16 |
hematopoietic lineage restricted progenitor cell | 1.17e-12 | 25 |
CD9-positive, CD41-positive megakaryocyte cell | 1.86e-12 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 1.86e-12 | 3 |
Kit-positive megakaryocyte progenitor cell | 1.86e-12 | 3 |
common myeloid progenitor | 1.07e-11 | 19 |
lymphocyte of B lineage | 2.01e-10 | 1 |
B cell | 2.01e-10 | 1 |
pro-B cell | 2.01e-10 | 1 |
hematopoietic cell | 7.27e-10 | 32 |
hematopoietic oligopotent progenitor cell | 7.27e-10 | 32 |
hematopoietic stem cell | 7.27e-10 | 32 |
hematopoietic multipotent progenitor cell | 7.27e-10 | 32 |
connective tissue cell | 8.30e-07 | 46 |
mesenchymal cell | 8.30e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
bone element | 2.82e-14 | 22 |
skeletal element | 2.82e-14 | 22 |
skeletal system | 2.82e-14 | 22 |
bone marrow | 7.22e-14 | 16 |
lymph node | 1.63e-10 | 1 |
axillary lymph node | 1.63e-10 | 1 |
peripheral lymph node | 1.63e-10 | 1 |
shoulder | 1.63e-10 | 1 |
musculoskeletal system | 8.76e-10 | 32 |
saliva-secreting gland | 1.03e-09 | 1 |
submandibular gland | 1.03e-09 | 1 |
gland of oral region | 1.03e-09 | 1 |
gland of foregut | 1.03e-09 | 1 |
major salivary gland | 1.03e-09 | 1 |
oral gland | 1.03e-09 | 1 |
oral cavity | 1.03e-09 | 1 |
submandibular gland primordium | 1.03e-09 | 1 |
hemolymphoid system | 9.61e-09 | 48 |
immune system | 9.61e-09 | 48 |
hematopoietic system | 6.77e-07 | 45 |
blood island | 6.77e-07 | 45 |
connective tissue | 8.30e-07 | 46 |