FFCP PHASE1:Mm9::chr9:119892880..119892898,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=893|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr9:119892880..119892898,-|id=chr9:119892880..119892898,-|ontology_enrichment_celltype=CL:0000838!2.85e-07!12;CL:0000219!4.12e-07!54;CL:0000988!7.32e-07!32;CL:0002032!7.32e-07!32;CL:0000037!7.32e-07!32;CL:0000566!7.32e-07!32;CL:0000837!7.32e-07!32;CL:0000791!7.33e-07!9;CL:0000789!7.33e-07!9;CL:0002420!7.33e-07!9;CL:0002419!7.33e-07!9;CL:0000790!7.33e-07!9|ontology_enrichment_celltype_v019_2=CL:0000219,4.80e-08,54;CL:0000988,1.57e-07,32;CL:0002032,1.57e-07,32;CL:0000037,1.57e-07,32;CL:0000837,1.57e-07,32;CL:0000838,2.06e-07,12;CL:0000791,5.42e-07,9;CL:0000789,5.42e-07,9;CL:0002420,5.42e-07,9;CL:0002419,5.42e-07,9;CL:0000790,5.42e-07,9;CL:0000084,8.88e-07,11;CL:0000827,8.88e-07,11|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!3.73e-08!48;UBERON:0002390!1.24e-07!45;UBERON:0003061!1.24e-07!45;UBERON:0000072!5.11e-07!27;UBERON:0006562!9.97e-07!24;UBERON:0001557!9.97e-07!24;UBERON:0001042!9.97e-07!24;UBERON:0008814!9.97e-07!24;UBERON:0009145!9.97e-07!24|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.42e-08,48;UBERON:0002405,1.42e-08,48;UBERON:0002390,4.89e-08,45;UBERON:0003061,4.89e-08,45;UBERON:0000072,2.00e-07,27;UBERON:0006562,3.90e-07,24;UBERON:0001557,3.90e-07,24;UBERON:0001042,3.90e-07,24;UBERON:0008814,3.90e-07,24;UBERON:0009145,3.90e-07,24;UBERON:0002370,6.42e-07,23;UBERON:0000974,6.42e-07,23;UBERON:0004807,6.42e-07,23;UBERON:0005058,6.42e-07,23;UBERON:0003351,6.42e-07,23;UBERON:0009113,6.42e-07,23;UBERON:0003295,6.42e-07,23;UBERON:0009722,6.42e-07,23;UBERON:0005562,6.42e-07,23;UBERON:0007690,6.42e-07,23;UBERON:0003408,7.79e-07,24|phase1_expression=4.64431656603902,4.53668029931169,7.73498706962211,2.72217790176147,3.00537437967808,3.52546471014969,1.40167584357315,13.1705789910408,51.2470948632067,51.7282603171606,8.04724450659873,9.81197555642638,10.2720437958723,14.6866276063916,1.66554880907831,1.82227740650843,1.39912375625629,7.88655413395594,5.21034847701807,6.36584477697045,4.08207792725135,2.58156473122302,2.08959831311148,1.91990907352088,2.75291137280604,2.8711598205751,3.4460959692726,2.58565479223067,0.950117097281869,0.252030129759931,0.443461021310609,0,0,0,2.3108129580102,1.16364251750945,1.22501613757421,5.4409111995798,6.2506827561904,4.18818995179039,7.05877785637217,10.2456822743767,4.36959317728038,2.26614272356039,1.31790010585369,2.0190142737785,6.25913075478431,2.18025156380447,4.17403747195497,3.88859798148567,1.95980990275508,7.18762821824858,14.9326519391385,10.8804321301702,13.1076581665561,5.14518872071894,3.43840127926508,3.6097046459421,0,0.528990979272033,0.633831403506179,1.69422266034566,3.55717918444456,3.5995988691256,2.96659908770092,0,3.29560121570245,2.68952813725088,1.34796496001021,0.945041568321835,1.26194976810829,0.856952953211411,1.54607978666129,0.734944795289724,0.191690942036473,0,2.20231761998777,0.510749352340751,1.0752457327937,0,0.182975287204819,0,1.67509799400829,0.56276261003168,1.06958773443767,0.294628585473668,0.142371680799103,0.372798891650601,4.16494063332512,4.08086424576642,20.8702431865208,0,9.51959867190851,1.07940638327563,3.24888208723835,1.79210754838934,1.26399978118577,0.681721290312231,0.259786004602869,0.70667914902068,3.66192891419369,1.28326477414318,0,0,2.16491041011214,2.78695852022608,2.52762222507392,3.31133251185274,4.66088190564909,3.11728492036132,1.56136794089522,0.913396434936424,0.461230994512117,2.11011696773672,3.29248379979973,2.38766523526383,6.42706916109372,2.74738778147832,0.884610551949874,1.7794353494215,1.98757366614354,0.484875253135222,0,2.63502717310392,3.77004072264219,0.766371165625774,15.6957813102756,7.7987355029143,12.8340929343795,1.3481157546434,3.20250421973039,0.376963056338593,3.82413504423008,3.58001640262463,1.66230435647648,1.62241263067758,3.66621709861139,0.995255764880744,1.76905930903572,1.89397670297827,0.910843100738926,0,0.720248519221397,0.452114453507145,0.816437989815934,1.0249097622788,0.468508622798644,0.776110112217047,0.431135985865684,0.945530400839096,0.879755620819744,1.09597866213787,1.66828349535359,2.089512999133,1.02891068203972,1.19420560091096,3.51106593656617,4.88961023517959,9.94572247884574,2.89976081549703,2.57978665979206,1.2604344302271,1.65721314909647,0.787056926989615,1.69693824176116,2.55787339225449,2.95100741539581,4.2035523252181,0.987359099480883,1.14917224855367,1.78351381000883,1.46199987425332,0.439100230582101,2.54992195644706,2.52347938276953,0.617427674275707,0.991256348951394,0.793351699990633,1.06644125267617,0.928946687441754,1.54640953586512,1.21010114774006,0.889512175379481,1.33157938278791,1.42358718463353,1.81168850196412,1.50801125280162,1.39269530428806,2.14460495831032,0.898819408654221,0.216138049874694,1.1948476395262,1.70701110857774,0.913988100877831,2.25415471346161,1.83286195060783,0.969762435838129,2.73529697572242,1.39120381673366,1.47610147979602,0.941992367048249,1.48076596706161,1.1858105083486,0.166845105716094,0.196558995113203,0,0.202860121388503,0.241177159752417,0.50925170356284,0.863088412352432,4.37765112292595,1.92192989231657,4.31304619582064,0.744281895337007,2.49630138491648,1.01031551178845,0.896987067609561,0.964887042726734,4.80358294433172,0.568474235311454,1.46668478797823,0.848725428875941,0.938760993154008,2.1775813467436,1.90434912708811,3.12213836572478,1.89162172927429,3.10050565508285,1.59454768657487,2.45794972073607,2.41758974612254,2.31438493730419,1.50791283939272,2.17562273527484,1.47529281905711,1.10374698521893,1.12385412991454,1.40654023910644,0.163934945376675,0.757412781613119,1.26203287766503,0.780877488593277,0.215423397732799,0.955875191810208,1.11399337041197,2.54768877709949,0.404810701674894,2.04579100537918,0.790575555893047,1.28528526568723,0.851640511249612,1.42452482933804,3.09485222771795,1.31976098378028,1.32745138339963,0.971122544619926,0.906970670894253,1.32023555829129,1.18120757152309,1.22974059177571,2.06742634534577,0.727067458955011,0,0.632073515871632,2.10837217149998,0,3.06395645178409,0.720244376125241,0.776152102696527,0.857348140126369,0.709360934569094,1.78368817602071,2.63278432963394,11.2652031172402,5.63212099352905,7.62595455109753,0.661585194164886,3.62749756471256,5.65125493435669,1.44751019827574,2.02932984805332,2.1338316966858,1.7488850197791,1.11255181206306,2.73393409276564,2.27025554759545,1.66675074632741,1.31857919903284,2.1871076435364,0.915112692826091,27.8764625189923,29.6697078926155,30.5421942107777,1.90934123603023,1.42351197111511,0.406638934253697,1.72808545314882,2.50905955217362,1.31017538247707,1.75323650300267,2.0663363931334,1.57053565190418,1.8146096260851,1.86401793926078,21.4203316699992,1.04661582230785,1.48912641411388,0.777804753376191,1.29159823477731,0.506868376472335,2.22978753426933,1.17183946359555,1.46803082195995,0.966336483304024,10.657110231541,16.7485893932934,0.810900861160657,0.718976700153791,3.63778304337826,9.30938817470904,6.55648470778174,8.77426781495773,9.15675068482379,8.27924889574811,10.97378015832,12.0991422164209,13.8390190650448,16.356013078856,20.1028271752299,3.17422537061296,4.66170502085536,4.66512054369274,6.04384618910682,1.54551675225752,2.25218970541418,1.09890974560359,2.57242054894879,0,2.82375921308533,4.60325236507177,0.572895513439397,4.81188910562325,2.05524755931193,0.755393897389701,4.72515750162264,4.05289082901798,4.53142408984205,4.65984280576638,0.62272408550506,0.798049746802062,0.512200817262403,1.70174701947806,0.419226325255965,1.10306105070008,1.77797382241292,1.23621034343337,0.962757628775446,1.01078884705519,2.02783439912192,2.07488975524684,1.49826411951812,1.34452820050225,1.83793500657962,1.42888107384922,1.0429589335037,1.15745532278223,0.824171801606613,1.32479028120958,0.342869252385415,1.59728225543404,0.953744759789284,1.30811774969096,1.69396884747595,1.18460451048347,1.64635175585495,1.05227884575137,1.90125759384206,1.12228454331548,1.66089025373844,1.67457620038458,0.409231043169689,0.619747364743864,2.50778594275484,1.74867404556562,0.233931608445408,1.50409737833809,4.01705497344571,1.32354851471709,1.85494268496337|short_description=p@chr9:119892880..119892898,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=893 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr9:119892880..119892898,- | |||
|description=CAGE_peak_at_chr9:119892880..119892898,- | |||
|id=chr9:119892880..119892898,- | |||
|ontology_enrichment_celltype=CL:0000838!2.85e-07!12;CL:0000219!4.12e-07!54;CL:0000988!7.32e-07!32;CL:0002032!7.32e-07!32;CL:0000037!7.32e-07!32;CL:0000566!7.32e-07!32;CL:0000837!7.32e-07!32;CL:0000791!7.33e-07!9;CL:0000789!7.33e-07!9;CL:0002420!7.33e-07!9;CL:0002419!7.33e-07!9;CL:0000790!7.33e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000219,4.80e-08,54;CL:0000988,1.57e-07,32;CL:0002032,1.57e-07,32;CL:0000037,1.57e-07,32;CL:0000837,1.57e-07,32;CL:0000838,2.06e-07,12;CL:0000791,5.42e-07,9;CL:0000789,5.42e-07,9;CL:0002420,5.42e-07,9;CL:0002419,5.42e-07,9;CL:0000790,5.42e-07,9;CL:0000084,8.88e-07,11;CL:0000827,8.88e-07,11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!3.73e-08!48;UBERON:0002390!1.24e-07!45;UBERON:0003061!1.24e-07!45;UBERON:0000072!5.11e-07!27;UBERON:0006562!9.97e-07!24;UBERON:0001557!9.97e-07!24;UBERON:0001042!9.97e-07!24;UBERON:0008814!9.97e-07!24;UBERON:0009145!9.97e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.42e-08,48;UBERON:0002405,1.42e-08,48;UBERON:0002390,4.89e-08,45;UBERON:0003061,4.89e-08,45;UBERON:0000072,2.00e-07,27;UBERON:0006562,3.90e-07,24;UBERON:0001557,3.90e-07,24;UBERON:0001042,3.90e-07,24;UBERON:0008814,3.90e-07,24;UBERON:0009145,3.90e-07,24;UBERON:0002370,6.42e-07,23;UBERON:0000974,6.42e-07,23;UBERON:0004807,6.42e-07,23;UBERON:0005058,6.42e-07,23;UBERON:0003351,6.42e-07,23;UBERON:0009113,6.42e-07,23;UBERON:0003295,6.42e-07,23;UBERON:0009722,6.42e-07,23;UBERON:0005562,6.42e-07,23;UBERON:0007690,6.42e-07,23;UBERON:0003408,7.79e-07,24 | |||
|phase1_expression=4.64431656603902,4.53668029931169,7.73498706962211,2.72217790176147,3.00537437967808,3.52546471014969,1.40167584357315,13.1705789910408,51.2470948632067,51.7282603171606,8.04724450659873,9.81197555642638,10.2720437958723,14.6866276063916,1.66554880907831,1.82227740650843,1.39912375625629,7.88655413395594,5.21034847701807,6.36584477697045,4.08207792725135,2.58156473122302,2.08959831311148,1.91990907352088,2.75291137280604,2.8711598205751,3.4460959692726,2.58565479223067,0.950117097281869,0.252030129759931,0.443461021310609,0,0,0,2.3108129580102,1.16364251750945,1.22501613757421,5.4409111995798,6.2506827561904,4.18818995179039,7.05877785637217,10.2456822743767,4.36959317728038,2.26614272356039,1.31790010585369,2.0190142737785,6.25913075478431,2.18025156380447,4.17403747195497,3.88859798148567,1.95980990275508,7.18762821824858,14.9326519391385,10.8804321301702,13.1076581665561,5.14518872071894,3.43840127926508,3.6097046459421,0,0.528990979272033,0.633831403506179,1.69422266034566,3.55717918444456,3.5995988691256,2.96659908770092,0,3.29560121570245,2.68952813725088,1.34796496001021,0.945041568321835,1.26194976810829,0.856952953211411,1.54607978666129,0.734944795289724,0.191690942036473,0,2.20231761998777,0.510749352340751,1.0752457327937,0,0.182975287204819,0,1.67509799400829,0.56276261003168,1.06958773443767,0.294628585473668,0.142371680799103,0.372798891650601,4.16494063332512,4.08086424576642,20.8702431865208,0,9.51959867190851,1.07940638327563,3.24888208723835,1.79210754838934,1.26399978118577,0.681721290312231,0.259786004602869,0.70667914902068,3.66192891419369,1.28326477414318,0,0,2.16491041011214,2.78695852022608,2.52762222507392,3.31133251185274,4.66088190564909,3.11728492036132,1.56136794089522,0.913396434936424,0.461230994512117,2.11011696773672,3.29248379979973,2.38766523526383,6.42706916109372,2.74738778147832,0.884610551949874,1.7794353494215,1.98757366614354,0.484875253135222,0,2.63502717310392,3.77004072264219,0.766371165625774,15.6957813102756,7.7987355029143,12.8340929343795,1.3481157546434,3.20250421973039,0.376963056338593,3.82413504423008,3.58001640262463,1.66230435647648,1.62241263067758,3.66621709861139,0.995255764880744,1.76905930903572,1.89397670297827,0.910843100738926,0,0.720248519221397,0.452114453507145,0.816437989815934,1.0249097622788,0.468508622798644,0.776110112217047,0.431135985865684,0.945530400839096,0.879755620819744,1.09597866213787,1.66828349535359,2.089512999133,1.02891068203972,1.19420560091096,3.51106593656617,4.88961023517959,9.94572247884574,2.89976081549703,2.57978665979206,1.2604344302271,1.65721314909647,0.787056926989615,1.69693824176116,2.55787339225449,2.95100741539581,4.2035523252181,0.987359099480883,1.14917224855367,1.78351381000883,1.46199987425332,0.439100230582101,2.54992195644706,2.52347938276953,0.617427674275707,0.991256348951394,0.793351699990633,1.06644125267617,0.928946687441754,1.54640953586512,1.21010114774006,0.889512175379481,1.33157938278791,1.42358718463353,1.81168850196412,1.50801125280162,1.39269530428806,2.14460495831032,0.898819408654221,0.216138049874694,1.1948476395262,1.70701110857774,0.913988100877831,2.25415471346161,1.83286195060783,0.969762435838129,2.73529697572242,1.39120381673366,1.47610147979602,0.941992367048249,1.48076596706161,1.1858105083486,0.166845105716094,0.196558995113203,0,0.202860121388503,0.241177159752417,0.50925170356284,0.863088412352432,4.37765112292595,1.92192989231657,4.31304619582064,0.744281895337007,2.49630138491648,1.01031551178845,0.896987067609561,0.964887042726734,4.80358294433172,0.568474235311454,1.46668478797823,0.848725428875941,0.938760993154008,2.1775813467436,1.90434912708811,3.12213836572478,1.89162172927429,3.10050565508285,1.59454768657487,2.45794972073607,2.41758974612254,2.31438493730419,1.50791283939272,2.17562273527484,1.47529281905711,1.10374698521893,1.12385412991454,1.40654023910644,0.163934945376675,0.757412781613119,1.26203287766503,0.780877488593277,0.215423397732799,0.955875191810208,1.11399337041197,2.54768877709949,0.404810701674894,2.04579100537918,0.790575555893047,1.28528526568723,0.851640511249612,1.42452482933804,3.09485222771795,1.31976098378028,1.32745138339963,0.971122544619926,0.906970670894253,1.32023555829129,1.18120757152309,1.22974059177571,2.06742634534577,0.727067458955011,0,0.632073515871632,2.10837217149998,0,3.06395645178409,0.720244376125241,0.776152102696527,0.857348140126369,0.709360934569094,1.78368817602071,2.63278432963394,11.2652031172402,5.63212099352905,7.62595455109753,0.661585194164886,3.62749756471256,5.65125493435669,1.44751019827574,2.02932984805332,2.1338316966858,1.7488850197791,1.11255181206306,2.73393409276564,2.27025554759545,1.66675074632741,1.31857919903284,2.1871076435364,0.915112692826091,27.8764625189923,29.6697078926155,30.5421942107777,1.90934123603023,1.42351197111511,0.406638934253697,1.72808545314882,2.50905955217362,1.31017538247707,1.75323650300267,2.0663363931334,1.57053565190418,1.8146096260851,1.86401793926078,21.4203316699992,1.04661582230785,1.48912641411388,0.777804753376191,1.29159823477731,0.506868376472335,2.22978753426933,1.17183946359555,1.46803082195995,0.966336483304024,10.657110231541,16.7485893932934,0.810900861160657,0.718976700153791,3.63778304337826,9.30938817470904,6.55648470778174,8.77426781495773,9.15675068482379,8.27924889574811,10.97378015832,12.0991422164209,13.8390190650448,16.356013078856,20.1028271752299,3.17422537061296,4.66170502085536,4.66512054369274,6.04384618910682,1.54551675225752,2.25218970541418,1.09890974560359,2.57242054894879,0,2.82375921308533,4.60325236507177,0.572895513439397,4.81188910562325,2.05524755931193,0.755393897389701,4.72515750162264,4.05289082901798,4.53142408984205,4.65984280576638,0.62272408550506,0.798049746802062,0.512200817262403,1.70174701947806,0.419226325255965,1.10306105070008,1.77797382241292,1.23621034343337,0.962757628775446,1.01078884705519,2.02783439912192,2.07488975524684,1.49826411951812,1.34452820050225,1.83793500657962,1.42888107384922,1.0429589335037,1.15745532278223,0.824171801606613,1.32479028120958,0.342869252385415,1.59728225543404,0.953744759789284,1.30811774969096,1.69396884747595,1.18460451048347,1.64635175585495,1.05227884575137,1.90125759384206,1.12228454331548,1.66089025373844,1.67457620038458,0.409231043169689,0.619747364743864,2.50778594275484,1.74867404556562,0.233931608445408,1.50409737833809,4.01705497344571,1.32354851471709,1.85494268496337 | |||
|short_description=p@chr9:119892880..119892898,- | |||
}} |
Latest revision as of 17:48, 4 August 2015
Short description: | p@chr9:119892880..119892898, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:119892880..119892898, - |
Coexpression cluster: | MCL_coexpression_mm9:893 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
motile cell | 4.80e-08 | 54 |
hematopoietic cell | 1.57e-07 | 32 |
hematopoietic oligopotent progenitor cell | 1.57e-07 | 32 |
hematopoietic stem cell | 1.57e-07 | 32 |
hematopoietic multipotent progenitor cell | 1.57e-07 | 32 |
lymphoid lineage restricted progenitor cell | 2.06e-07 | 12 |
mature alpha-beta T cell | 5.42e-07 | 9 |
alpha-beta T cell | 5.42e-07 | 9 |
immature T cell | 5.42e-07 | 9 |
mature T cell | 5.42e-07 | 9 |
immature alpha-beta T cell | 5.42e-07 | 9 |
T cell | 8.88e-07 | 11 |
pro-T cell | 8.88e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.42e-08 | 48 |
immune system | 1.42e-08 | 48 |
hematopoietic system | 4.89e-08 | 45 |
blood island | 4.89e-08 | 45 |
segment of respiratory tract | 2.00e-07 | 27 |
pharynx | 3.90e-07 | 24 |
upper respiratory tract | 3.90e-07 | 24 |
chordate pharynx | 3.90e-07 | 24 |
pharyngeal arch system | 3.90e-07 | 24 |
pharyngeal region of foregut | 3.90e-07 | 24 |
thymus | 6.42e-07 | 23 |
neck | 6.42e-07 | 23 |
respiratory system epithelium | 6.42e-07 | 23 |
hemolymphoid system gland | 6.42e-07 | 23 |
pharyngeal epithelium | 6.42e-07 | 23 |
thymic region | 6.42e-07 | 23 |
pharyngeal gland | 6.42e-07 | 23 |
entire pharyngeal arch endoderm | 6.42e-07 | 23 |
thymus primordium | 6.42e-07 | 23 |
early pharyngeal endoderm | 6.42e-07 | 23 |
gland of gut | 7.79e-07 | 24 |