FFCP PHASE1:Mm9::chr10:79538123..79538152,-: Difference between revisions
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{{FFCP|EntrezGene=216161|HGNC=|MCL_coexpression_id=2585|UniProt=Q7TNB8|association_with_transcript=0bp_to_ENSMUST00000092316_5end|description=CAGE_peak_2_at_Sbno2_5end|id=chr10:79538123..79538152,-|ontology_enrichment_celltype=CL:0000144!3.62e-11!121;CL:0000012!3.62e-11!121;CL:0000219!6.30e-11!54;CL:0002371!7.90e-10!118;CL:0000548!1.51e-08!115;CL:0000004!1.51e-08!115;CL:0000255!1.51e-08!115;CL:0000034!1.10e-07!97;CL:0002320!2.00e-07!46;CL:0000134!2.00e-07!46;CL:0000333!9.21e-07!10;CL:0000095!9.21e-07!10;CL:0000243!9.21e-07!10;CL:0000123!9.21e-07!10;CL:0000125!9.21e-07!10;CL:0000030!9.21e-07!10;CL:0000339!9.21e-07!10|ontology_enrichment_celltype_v019_2=CL:0000219,1.25e-13,54;CL:0000034,8.65e-11,97;CL:0002320,3.03e-09,46;CL:0000134,3.03e-09,46;CL:0000723,2.43e-08,91;CL:0000048,2.43e-08,91;CL:0000333,5.65e-08,10;CL:0000095,5.65e-08,10;CL:0000243,5.65e-08,10;CL:0000123,5.65e-08,10;CL:0000125,5.65e-08,10;CL:0000030,5.65e-08,10;CL:0000339,5.65e-08,10;CL:0000355,6.85e-08,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002204!4.68e-15!32;UBERON:0001474!6.62e-10!22;UBERON:0004765!6.62e-10!22;UBERON:0001434!6.62e-10!22;UBERON:0002371!9.35e-09!16;UBERON:0000914!4.91e-08!17;UBERON:0002384!2.00e-07!46;UBERON:0002329!6.46e-07!11;UBERON:0003077!6.46e-07!11;UBERON:0003059!6.46e-07!11;UBERON:0007282!6.46e-07!11;UBERON:0009618!6.46e-07!11;UBERON:0007285!6.46e-07!11|ontology_enrichment_uberon_v019_2=UBERON:0002204,1.16e-17,32;UBERON:0001474,2.38e-11,22;UBERON:0004765,2.38e-11,22;UBERON:0001434,2.38e-11,22;UBERON:0002371,6.76e-10,16;UBERON:0002384,3.03e-09,46;UBERON:0007524,3.65e-08,11;UBERON:0003077,3.65e-08,11;UBERON:0007285,3.65e-08,11;UBERON:0001134,6.85e-08,9;UBERON:0002036,6.85e-08,9;UBERON:0002385,6.85e-08,9;UBERON:0000486,6.85e-08,9;UBERON:0007503,6.85e-08,9;UBERON:0001015,6.85e-08,9;UBERON:0002329,6.85e-08,9;UBERON:0003082,6.85e-08,9;UBERON:0003059,6.85e-08,9;UBERON:0007282,6.85e-08,9;UBERON:0004290,6.85e-08,9;UBERON:0009618,6.85e-08,9;UBERON:0000383,1.58e-07,10|phase1_expression=7.04654927261093,1.04692622291808,1.81999695755814,0,0,0.839396359559449,0.700837921786577,4.00282302668886,4.22366166455,4.21316147379588,0.34243593645101,0.797721589953364,1.54080656938085,2.27293046289393,5.3297561890506,3.64455481301687,0.699561878128147,8.3597473819933,7.40417941470989,10.1853516431527,1.87095238332354,0.695036658406197,0,1.59992422793407,0.91763712426868,1.72269589234506,2.15380998079537,1.72376986148711,1.33016393619462,0.756090389279792,1.77384408524244,0,0,0,0,0.166234645358492,0,51.0608589499027,48.4427913604756,21.4644735029257,55.2937598749153,58.7419117064263,18.934903768215,13.7227531593379,16.2203089951223,40.5638322277316,3.9119567217402,8.06693078607652,18.6733255324301,21.5817187972455,11.7588594165305,23.0004102983955,11.5769998179838,5.07753499407941,2.01656279485478,9.51859913333004,22.0630748752843,26.814948798427,0.404632921719196,0,0,12.876092218627,6.22506357277798,62.5430303510572,80.0981753679249,78.8632927590171,60.2196222141993,30.7374644257244,0.103689612308478,0,0.210324961351382,0.856952953211411,0.883474163806454,0,0,0,1.10115880999389,0,0,0.131886287730194,0,0,0.837548997004143,0.56276261003168,0.45839474333043,0.589257170947335,0.569486723196412,0.186399445825301,20.8247031666256,28.2637634799378,168.990996913078,1.72084775396277,3.39985666853875,0,0.649776417447669,0,1.40444420131752,3.2381761289831,1.81850203222008,2.12003744706204,1.40843419776681,1.28326477414318,2.54805239706646,0,4.76280290224671,3.29367825117628,4.04419556011827,1.25602267690966,21.2329064590681,2.52351636410202,0.867426633830679,5.1759131313064,5.76538743140146,6.33035090321015,5.05631440683531,8.67099480174761,3.70792451601561,1.15679485535929,3.5384422077995,2.42650274921114,3.5334642953663,6.30337829075789,0,0.292780797011547,0,3.32094171771169,8.8663192134381,8.39863823390771,8.89491589511453,0.748953197024114,0,0,0.173824320192276,0.511430914660661,0.20778804455956,0.648965052271031,0.81471491080253,5.97153458928446,0.252722758433675,1.05220927943237,0,0,0.180062129805349,0,1.08858398642125,0.640568601424249,0.0937017245597288,0.776110112217047,0,0,0,0,0.278047249225598,0.348252166522167,0.411564272815887,0,9.83098462238529,7.97778512055617,9.09323198065896,0.414251545071004,0,0.900310307305074,0.473489471170421,0,0,1.16266972375204,0,0.467061369468678,0.493679549740441,0,0.243206428637567,0.438599962275997,0.439100230582101,0.939444931322602,0.420579897128254,0.102904612379284,1.32167513193519,1.58670339998127,0.213288250535234,0,0,0.201683524623343,0.22237804384487,0.380451252225118,0.474529061544512,0.494096864172033,0.251335208800269,0.596869416123452,0,0,0.648414149624083,0.199141273254367,0,0.228497025219458,0,0,0,0.420814919341911,0.126473074248515,0.738050739898011,0.470996183524124,0.493588655687202,0.296452627087149,0,0,0,0.811440485554012,1.4470629585145,1.01850340712568,0.863088412352432,3.89124544260085,0.823684239564244,0,2.60498663367952,0.9361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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:216161 | |||
|HGNC= | |||
|MCL_coexpression_id=2585 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q7TNB8 | |||
|association_with_transcript=0bp_to_ENSMUST00000092316_5end | |||
|cluster_id=chr10:79538123..79538152,- | |||
|description=CAGE_peak_2_at_Sbno2_5end | |||
|id=chr10:79538123..79538152,- | |||
|ontology_enrichment_celltype=CL:0000144!3.62e-11!121;CL:0000012!3.62e-11!121;CL:0000219!6.30e-11!54;CL:0002371!7.90e-10!118;CL:0000548!1.51e-08!115;CL:0000004!1.51e-08!115;CL:0000255!1.51e-08!115;CL:0000034!1.10e-07!97;CL:0002320!2.00e-07!46;CL:0000134!2.00e-07!46;CL:0000333!9.21e-07!10;CL:0000095!9.21e-07!10;CL:0000243!9.21e-07!10;CL:0000123!9.21e-07!10;CL:0000125!9.21e-07!10;CL:0000030!9.21e-07!10;CL:0000339!9.21e-07!10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000219,1.25e-13,54;CL:0000034,8.65e-11,97;CL:0002320,3.03e-09,46;CL:0000134,3.03e-09,46;CL:0000723,2.43e-08,91;CL:0000048,2.43e-08,91;CL:0000333,5.65e-08,10;CL:0000095,5.65e-08,10;CL:0000243,5.65e-08,10;CL:0000123,5.65e-08,10;CL:0000125,5.65e-08,10;CL:0000030,5.65e-08,10;CL:0000339,5.65e-08,10;CL:0000355,6.85e-08,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!4.68e-15!32;UBERON:0001474!6.62e-10!22;UBERON:0004765!6.62e-10!22;UBERON:0001434!6.62e-10!22;UBERON:0002371!9.35e-09!16;UBERON:0000914!4.91e-08!17;UBERON:0002384!2.00e-07!46;UBERON:0002329!6.46e-07!11;UBERON:0003077!6.46e-07!11;UBERON:0003059!6.46e-07!11;UBERON:0007282!6.46e-07!11;UBERON:0009618!6.46e-07!11;UBERON:0007285!6.46e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,1.16e-17,32;UBERON:0001474,2.38e-11,22;UBERON:0004765,2.38e-11,22;UBERON:0001434,2.38e-11,22;UBERON:0002371,6.76e-10,16;UBERON:0002384,3.03e-09,46;UBERON:0007524,3.65e-08,11;UBERON:0003077,3.65e-08,11;UBERON:0007285,3.65e-08,11;UBERON:0001134,6.85e-08,9;UBERON:0002036,6.85e-08,9;UBERON:0002385,6.85e-08,9;UBERON:0000486,6.85e-08,9;UBERON:0007503,6.85e-08,9;UBERON:0001015,6.85e-08,9;UBERON:0002329,6.85e-08,9;UBERON:0003082,6.85e-08,9;UBERON:0003059,6.85e-08,9;UBERON:0007282,6.85e-08,9;UBERON:0004290,6.85e-08,9;UBERON:0009618,6.85e-08,9;UBERON:0000383,1.58e-07,10 | |||
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| |||
|short_description=p2@Sbno2 | |||
}} |
Revision as of 19:14, 4 August 2015
Short description: | p2@Sbno2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Sbno2_5end |
Coexpression cluster: | MCL_coexpression_mm9:2585 |
Association with transcript: | 0bp_to_ENSMUST00000092316_5end |
EntrezGene: | 216161 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
motile cell | 1.25e-13 | 54 |
stem cell | 8.65e-11 | 97 |
connective tissue cell | 3.03e-09 | 46 |
mesenchymal cell | 3.03e-09 | 46 |
somatic stem cell | 2.43e-08 | 91 |
multi fate stem cell | 2.43e-08 | 91 |
migratory neural crest cell | 5.65e-08 | 10 |
neuron associated cell | 5.65e-08 | 10 |
glial cell (sensu Vertebrata) | 5.65e-08 | 10 |
neuron associated cell (sensu Vertebrata) | 5.65e-08 | 10 |
glial cell | 5.65e-08 | 10 |
glioblast | 5.65e-08 | 10 |
glioblast (sensu Vertebrata) | 5.65e-08 | 10 |
multi-potent skeletal muscle stem cell | 6.85e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 1.16e-17 | 32 |
bone element | 2.38e-11 | 22 |
skeletal element | 2.38e-11 | 22 |
skeletal system | 2.38e-11 | 22 |
bone marrow | 6.76e-10 | 16 |
connective tissue | 3.03e-09 | 46 |
dense mesenchyme tissue | 3.65e-08 | 11 |
paraxial mesoderm | 3.65e-08 | 11 |
presumptive paraxial mesoderm | 3.65e-08 | 11 |
skeletal muscle tissue | 6.85e-08 | 9 |
striated muscle tissue | 6.85e-08 | 9 |
muscle tissue | 6.85e-08 | 9 |
multilaminar epithelium | 6.85e-08 | 9 |
epithelial vesicle | 6.85e-08 | 9 |
musculature | 6.85e-08 | 9 |
somite | 6.85e-08 | 9 |
myotome | 6.85e-08 | 9 |
presomitic mesoderm | 6.85e-08 | 9 |
presumptive segmental plate | 6.85e-08 | 9 |
dermomyotome | 6.85e-08 | 9 |
trunk paraxial mesoderm | 6.85e-08 | 9 |
musculature of body | 1.58e-07 | 10 |