FFCP PHASE1:Mm9::chr1:136619991..136619995,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=30 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:136619991..136619995,+ | |||
|description=CAGE_peak_at_chr1:136619991..136619995,+ | |description=CAGE_peak_at_chr1:136619991..136619995,+ | ||
|id=chr1:136619991..136619995,+ | |id=chr1:136619991..136619995,+ | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000991!6.51e-10!18;UBERON:0005564!6.51e-10!18;UBERON:0003135!7.29e-10!15;UBERON:0004176!5.24e-09!17;UBERON:0009196!5.24e-09!17;UBERON:0009117!5.24e-09!17;UBERON:0003101!5.60e-09!16;UBERON:0000079!5.60e-09!16;UBERON:0000473!7.42e-09!14;UBERON:0002553!8.92e-09!39;UBERON:0003133!1.29e-08!24;UBERON:0005156!2.03e-08!26;UBERON:0000990!2.03e-08!26;UBERON:0003886!4.34e-08!38;UBERON:0002323!2.30e-07!37;UBERON:0004458!2.30e-07!37 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004733,4.99e-14,6;UBERON:0004732,4.99e-14,6;UBERON:0002028,4.99e-14,6;UBERON:0007277,4.99e-14,6;UBERON:0003076,3.14e-12,12;UBERON:0003057,3.14e-12,12;UBERON:0002037,4.16e-10,4;UBERON:0002680,4.16e-10,4;UBERON:0001895,4.16e-10,4;UBERON:0010092,4.16e-10,4;UBERON:0006215,4.16e-10,4;UBERON:0002259,6.88e-10,1;UBERON:0002314,6.88e-10,1;UBERON:0004061,6.88e-10,1;UBERON:0006777,6.88e-10,1;UBERON:0005882,6.88e-10,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.171217968225505,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0.173485326766136,0,0,0,0.352766121407114,0,0,0,0,0,0.220841518460394,0.484875253135222,0,7.61230072230023,7.74952815209784,0,0,0,0,1.64769703345305,1.83000241127451,0,0.173824320192276,0.511430914660661,0.41557608911912,0.324482526135515,0.509196819251581,0.373220911830279,2.77995034277042,0,0,0,0,0.150704817835715,0,0.2562274405697,0,0.517406741478031,0,0,0.175951124163949,0,0.278047249225598,0,0,0.796137067273973,0,0,0,0,0.234526059981096,0,0,0,0.308534225774757,0,0,0,0,0.164167464079095,0,0,0,0,0.210289948564127,0.102904612379284,0,0,0.639864751605702,1.16118335930219,0.128867461322093,0.201683524623343,0,0.190225626112559,0,0,0.251335208800269,0.198956472041151,0,0,0,0.199141273254367,0,0.342745537829186,0,0.407302655690628,0.581857461502877,0.350679099451593,0.379419222745544,0,0,0,0,0.166845105716094,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0.157635144106191,0,0,0.163863314715738,0.518054945597687,0.433947175744535,0,0,0,0,0.963303539926752,1.64096361229084,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0.325773918707152,0.164970122972535,0,0.242780636154981,0.302323556964751,0,0,0,0,0.363533729477506,0.712994756769443,0,0,0,0,0,0,0,0.177340233642274,0,0,0,0,0,0,0,0,0,0,0,0,2.41052892613663,0,0.206386867963223,0.185194527369712,0.188368457004691,0,0,0,0,0,0,0.316335993581135,0.203319467126849,0.324016022465404,0,0.436725127492355,0.134864346384821,0,0,0,0.621339313086926,0,0.299033092087958,0.165458490457098,0.388902376688095,0.516639293910924,1.85851738039856,0.704143431874524,2.8644964665669,0.943734099831398,0.241584120826006,0.288030006257865,0,0.202725215290164,0.102710957164827,0,0,0.198681354781265,0.120195449519969,0,0,0.381034033274999,0.201652370273681,0,0.192423683280659,0.116876902181569,0,0,0,0,0,0,0,0.214368379079066,0,0.564751842617067,0,0,0.343706364687375,0,0,0,0.45032120322422,0,0,0,0,0.170733605754134,0,0,0,0,0,0,0,0,0.377252682772152,0.0936415074698824,0.0640251524048693,0,0,0,0,0,0,0,0.177475806159338,0,0,0,0.0846146078916765,0,0.526139422875686,0.135804113845862,0,0.118635018124174,0.197008964751127,0.409231043169689,0,0.192906610981141,0,0,0,0,0.220591419119515,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0.171217968225505,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0.173485326766136,0,0,0,0.352766121407114,0,0,0,0,0,0.220841518460394,0.484875253135222,0,7.61230072230023,7.74952815209784,0,0,0,0,1.64769703345305,1.83000241127451,0,0.173824320192276,0.511430914660661,0.41557608911912,0.324482526135515,0.509196819251581,0.373220911830279,2.77995034277042,0,0,0,0,0.150704817835715,0,0.2562274405697,0,0.517406741478031,0,0,0.175951124163949,0,0.278047249225598,0,0,0.796137067273973,0,0,0,0,0.234526059981096,0,0,0,0.308534225774757,0,0,0,0,0.164167464079095,0,0,0,0,0.210289948564127,0.102904612379284,0,0,0.639864751605702,1.16118335930219,0.128867461322093,0.201683524623343,0,0.190225626112559,0,0,0.251335208800269,0.198956472041151,0,0,0,0.199141273254367,0,0.342745537829186,0,0.407302655690628,0.581857461502877,0.350679099451593,0.379419222745544,0,0,0,0,0.166845105716094,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0.157635144106191,0,0,0.163863314715738,0.518054945597687,0.433947175744535,0,0,0,0,0.963303539926752,1.64096361229084,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0.325773918707152,0.164970122972535,0,0.242780636154981,0.302323556964751,0,0,0,0,0.363533729477506,0.712994756769443,0,0,0,0,0,0,0,0.177340233642274,0,0,0,0,0,0,0,0,0,0,0,0,2.41052892613663,0,0.206386867963223,0.185194527369712,0.188368457004691,0,0,0,0,0,0,0.316335993581135,0.203319467126849,0.324016022465404,0,0.436725127492355,0.134864346384821,0,0,0,0.621339313086926,0,0.299033092087958,0.165458490457098,0.388902376688095,0.516639293910924,1.85851738039856,0.704143431874524,2.8644964665669,0.943734099831398,0.241584120826006,0.288030006257865,0,0.202725215290164,0.102710957164827,0,0,0.198681354781265,0.120195449519969,0,0,0.381034033274999,0.201652370273681,0,0.192423683280659,0.116876902181569,0,0,0,0,0,0,0,0.214368379079066,0,0.564751842617067,0,0,0.343706364687375,0,0,0,0.45032120322422,0,0,0,0,0.170733605754134,0,0,0,0,0,0,0,0,0.377252682772152,0.0936415074698824,0.0640251524048693,0,0,0,0,0,0,0,0.177475806159338,0,0,0,0.0846146078916765,0,0.526139422875686,0.135804113845862,0,0.118635018124174,0.197008964751127,0.409231043169689,0,0.192906610981141,0,0,0,0,0.220591419119515,0 | ||
|short_description=p@chr1:136619991..136619995,+ | |short_description=p@chr1:136619991..136619995,+ | ||
}} | }} |
Latest revision as of 20:30, 4 August 2015
Short description: | p@chr1:136619991..136619995, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:136619991..136619995, + |
Coexpression cluster: | MCL_coexpression_mm9:30 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
segmental subdivision of hindbrain | 4.99e-14 | 6 |
segmental subdivision of nervous system | 4.99e-14 | 6 |
hindbrain | 4.99e-14 | 6 |
presumptive hindbrain | 4.99e-14 | 6 |
posterior neural tube | 3.14e-12 | 12 |
chordal neural plate | 3.14e-12 | 12 |
cerebellum | 4.16e-10 | 4 |
regional part of metencephalon | 4.16e-10 | 4 |
metencephalon | 4.16e-10 | 4 |
future metencephalon | 4.16e-10 | 4 |
rhombic lip | 4.16e-10 | 4 |
corpora quadrigemina | 6.88e-10 | 1 |
midbrain tectum | 6.88e-10 | 1 |
neural tube mantle layer | 6.88e-10 | 1 |
tectal plate | 6.88e-10 | 1 |
neural tube alar plate | 6.88e-10 | 1 |