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FFCP PHASE1:Mm9::chr2:25284237..25284250,+: Difference between revisions

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{{FFCP|EntrezGene=11305|HGNC=|MCL_coexpression_id=121|UniProt=A2AJ26|association_with_transcript=14bp_to_ENSMUST00000102919_5end|description=CAGE_peak_3_at_Abca2_5end|id=chr2:25284237..25284250,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002614,3.40e-07,3;CL:0002610,3.91e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!3.05e-15!63;UBERON:0001017!4.26e-15!73;UBERON:0005743!4.26e-15!73;UBERON:0000073!1.48e-14!75;UBERON:0001016!1.48e-14!75;UBERON:0000955!2.76e-14!50;UBERON:0006238!2.76e-14!50;UBERON:0002616!9.00e-14!49;UBERON:0001049!1.19e-13!52;UBERON:0005068!1.19e-13!52;UBERON:0006241!1.19e-13!52;UBERON:0007135!1.19e-13!52;UBERON:0004121!3.01e-11!102;UBERON:0000924!3.01e-11!102;UBERON:0006601!3.01e-11!102;UBERON:0002346!5.26e-11!71;UBERON:0003075!5.26e-11!71;UBERON:0007284!5.26e-11!71;UBERON:0003056!1.53e-10!49;UBERON:0003080!1.42e-09!40;UBERON:0007811!1.51e-09!86;UBERON:0000025!3.06e-09!114;UBERON:0002780!5.12e-09!39;UBERON:0001890!5.12e-09!39;UBERON:0006240!5.12e-09!39;UBERON:0004111!8.02e-09!122;UBERON:0000153!4.13e-08!94;UBERON:0002020!6.42e-08!34;UBERON:0002791!6.04e-07!29;UBERON:0003528!6.04e-07!29;UBERON:0001893!6.04e-07!29|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.10e-19,54;UBERON:0001049,7.99e-17,52;UBERON:0005068,7.99e-17,52;UBERON:0006241,7.99e-17,52;UBERON:0007135,7.99e-17,52;UBERON:0001017,1.37e-16,73;UBERON:0001016,6.02e-16,75;UBERON:0000955,1.30e-15,47;UBERON:0006238,1.30e-15,47;UBERON:0002616,1.50e-14,46;UBERON:0002346,9.00e-14,64;UBERON:0003075,9.00e-14,64;UBERON:0007284,9.00e-14,64;UBERON:0004121,3.91e-13,95;UBERON:0000924,3.91e-13,95;UBERON:0006601,3.91e-13,95;UBERON:0010371,2.00e-12,73;UBERON:0003076,3.23e-10,12;UBERON:0003057,3.23e-10,12;UBERON:0004733,3.32e-09,6;UBERON:0004732,3.32e-09,6;UBERON:0002028,3.32e-09,6;UBERON:0007277,3.32e-09,6;UBERON:0003080,5.21e-09,40;UBERON:0002950,5.47e-09,4;UBERON:0001891,5.47e-09,4;UBERON:0009616,5.47e-09,4;UBERON:0010286,5.47e-09,4;UBERON:0000025,1.27e-08,114;UBERON:0010314,1.63e-08,92;UBERON:0004111,2.38e-08,122;UBERON:0002020,3.93e-08,34;UBERON:0002780,5.33e-08,39;UBERON:0001890,5.33e-08,39;UBERON:0006240,5.33e-08,39;UBERON:0003056,1.12e-07,49;UBERON:0003528,2.80e-07,29;UBERON:0002791,2.80e-07,29;UBERON:0001893,2.80e-07,29;UBERON:0002038,3.40e-07,3;UBERON:0009663,3.40e-07,3;UBERON:0009661,3.40e-07,3;UBERON:0000125,3.40e-07,3;UBERON:0002308,3.40e-07,3;UBERON:0004684,3.91e-07,3;UBERON:0002275,3.91e-07,3|phase1_expression=0.480446541314382,0,0,0.60492842261366,1.00179145989269,0,0,0.516493293766305,0.422366166455,0.70219357896598,0,0,0,0,0,0,0,0,0.137114433605739,0,1.44573593256819,2.28369187762036,2.61199789138935,0,0,0,0.86152399231815,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485510353031154,1.00717454380462,0.709638518536602,0.367093504323363,0,1.52617609466313,0.878744730937887,4.27745777963423,0.279972843250725,0,0,0.725362142011344,1.00828139742739,0,0.286533439938757,0,0.404632921719196,0.528990979272033,0,0,0,0.449949858640699,0,0,0.898800331555214,2.68952813725088,0,0.405017814995072,0,3.14216082844184,0.883474163806454,0.122490799214954,0,0,7.70811166995721,9.3211756802187,8.75557239560588,0.263772575460388,0.640413505216868,0.52091337055676,10.8881369610539,9.56696437053856,6.57032465440283,0.589257170947335,1.13897344639282,0,0.302904773332736,0,0.289864488701678,0.860423876981386,0.679971333707751,0.539703191637817,1.94932925234301,0,0.702222100658759,0,0,0,1.54927761754349,0,0,0,0,0.253359865475099,0.505524445014783,0.45673551887624,0.258937883647172,0,0,0,0,0,0.117588707135705,0.251333182659351,0,0.86759614151947,0,0,0,0,0,18.737971008739,19.2690970268379,0,0.359445373517761,0,0.127070227073065,7.18995069143149,8.23501085073528,0.251308704225729,4.17178368461463,2.81287003063364,10.5971902725376,11.356888414743,0.611036183101898,3.6078021476927,14.4051972307195,0.631325567659422,0.260240885925407,0.689706313300419,0.360124259610698,0,0.884474488967262,0.512454881139399,0.187403449119458,1.81092359517311,0.215567992932842,0.189106080167819,0,0,0,0.348252166522167,0,0.398068533636986,1.40442637462647,0.257347907114715,0.568326998791185,0.207125772535502,0,0,0,0.393528463494808,0,0,0,0.467061369468678,0.329119699826961,0.32833492815819,0.162137619091711,0,0.219550115291051,0.268412837520744,3.57492912559016,0.308713837137853,0.330418782983798,0.264450566663544,0,0,0,0,0.22237804384487,0,0,0,0,0,0.19496408711912,0,0,0,0.189667900953082,0.228497025219458,0,0.814605311381257,0.969762435838129,1.19230893813542,1.07502113111237,1.32849133181642,1.09899109488962,0.987177311374404,1.48226313543574,0.166845105716094,0,0,0,0.241177159752417,0,0,0,0.274561413188081,0,0,0,1.26289438973556,0.896987067609561,0.482443521363367,0,0.189491411770485,0.162964976442026,0.169745085775188,0.469380496577004,0.502518772325447,0.238043640886014,0.585400943573396,0,0.221464689648775,0.318909537314974,0.163863314715738,0.172684981865896,0,0,0,0.491764273019036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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:11305
|HGNC=
|MCL_coexpression_id=121
|TSSclassifier=NA
|UniProt=uniprot:A2AJ26
|association_with_transcript=14bp_to_ENSMUST00000102919_5end
|cluster_id=chr2:25284237..25284250,+
|description=CAGE_peak_3_at_Abca2_5end
|id=chr2:25284237..25284250,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0002614,3.40e-07,3;CL:0002610,3.91e-07,3
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000033!3.05e-15!63;UBERON:0001017!4.26e-15!73;UBERON:0005743!4.26e-15!73;UBERON:0000073!1.48e-14!75;UBERON:0001016!1.48e-14!75;UBERON:0000955!2.76e-14!50;UBERON:0006238!2.76e-14!50;UBERON:0002616!9.00e-14!49;UBERON:0001049!1.19e-13!52;UBERON:0005068!1.19e-13!52;UBERON:0006241!1.19e-13!52;UBERON:0007135!1.19e-13!52;UBERON:0004121!3.01e-11!102;UBERON:0000924!3.01e-11!102;UBERON:0006601!3.01e-11!102;UBERON:0002346!5.26e-11!71;UBERON:0003075!5.26e-11!71;UBERON:0007284!5.26e-11!71;UBERON:0003056!1.53e-10!49;UBERON:0003080!1.42e-09!40;UBERON:0007811!1.51e-09!86;UBERON:0000025!3.06e-09!114;UBERON:0002780!5.12e-09!39;UBERON:0001890!5.12e-09!39;UBERON:0006240!5.12e-09!39;UBERON:0004111!8.02e-09!122;UBERON:0000153!4.13e-08!94;UBERON:0002020!6.42e-08!34;UBERON:0002791!6.04e-07!29;UBERON:0003528!6.04e-07!29;UBERON:0001893!6.04e-07!29
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.10e-19,54;UBERON:0001049,7.99e-17,52;UBERON:0005068,7.99e-17,52;UBERON:0006241,7.99e-17,52;UBERON:0007135,7.99e-17,52;UBERON:0001017,1.37e-16,73;UBERON:0001016,6.02e-16,75;UBERON:0000955,1.30e-15,47;UBERON:0006238,1.30e-15,47;UBERON:0002616,1.50e-14,46;UBERON:0002346,9.00e-14,64;UBERON:0003075,9.00e-14,64;UBERON:0007284,9.00e-14,64;UBERON:0004121,3.91e-13,95;UBERON:0000924,3.91e-13,95;UBERON:0006601,3.91e-13,95;UBERON:0010371,2.00e-12,73;UBERON:0003076,3.23e-10,12;UBERON:0003057,3.23e-10,12;UBERON:0004733,3.32e-09,6;UBERON:0004732,3.32e-09,6;UBERON:0002028,3.32e-09,6;UBERON:0007277,3.32e-09,6;UBERON:0003080,5.21e-09,40;UBERON:0002950,5.47e-09,4;UBERON:0001891,5.47e-09,4;UBERON:0009616,5.47e-09,4;UBERON:0010286,5.47e-09,4;UBERON:0000025,1.27e-08,114;UBERON:0010314,1.63e-08,92;UBERON:0004111,2.38e-08,122;UBERON:0002020,3.93e-08,34;UBERON:0002780,5.33e-08,39;UBERON:0001890,5.33e-08,39;UBERON:0006240,5.33e-08,39;UBERON:0003056,1.12e-07,49;UBERON:0003528,2.80e-07,29;UBERON:0002791,2.80e-07,29;UBERON:0001893,2.80e-07,29;UBERON:0002038,3.40e-07,3;UBERON:0009663,3.40e-07,3;UBERON:0009661,3.40e-07,3;UBERON:0000125,3.40e-07,3;UBERON:0002308,3.40e-07,3;UBERON:0004684,3.91e-07,3;UBERON:0002275,3.91e-07,3
|phase1_expression=0.480446541314382,0,0,0.60492842261366,1.00179145989269,0,0,0.516493293766305,0.422366166455,0.70219357896598,0,0,0,0,0,0,0,0,0.137114433605739,0,1.44573593256819,2.28369187762036,2.61199789138935,0,0,0,0.86152399231815,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485510353031154,1.00717454380462,0.709638518536602,0.367093504323363,0,1.52617609466313,0.878744730937887,4.27745777963423,0.279972843250725,0,0,0.725362142011344,1.00828139742739,0,0.286533439938757,0,0.404632921719196,0.528990979272033,0,0,0,0.449949858640699,0,0,0.898800331555214,2.68952813725088,0,0.405017814995072,0,3.14216082844184,0.883474163806454,0.122490799214954,0,0,7.70811166995721,9.3211756802187,8.75557239560588,0.263772575460388,0.640413505216868,0.52091337055676,10.8881369610539,9.56696437053856,6.57032465440283,0.589257170947335,1.13897344639282,0,0.302904773332736,0,0.289864488701678,0.860423876981386,0.679971333707751,0.539703191637817,1.94932925234301,0,0.702222100658759,0,0,0,1.54927761754349,0,0,0,0,0.253359865475099,0.505524445014783,0.45673551887624,0.258937883647172,0,0,0,0,0,0.117588707135705,0.251333182659351,0,0.86759614151947,0,0,0,0,0,18.737971008739,19.2690970268379,0,0.359445373517761,0,0.127070227073065,7.18995069143149,8.23501085073528,0.251308704225729,4.17178368461463,2.81287003063364,10.5971902725376,11.356888414743,0.611036183101898,3.6078021476927,14.4051972307195,0.631325567659422,0.260240885925407,0.689706313300419,0.360124259610698,0,0.884474488967262,0.512454881139399,0.187403449119458,1.81092359517311,0.215567992932842,0.189106080167819,0,0,0,0.348252166522167,0,0.398068533636986,1.40442637462647,0.257347907114715,0.568326998791185,0.207125772535502,0,0,0,0.393528463494808,0,0,0,0.467061369468678,0.329119699826961,0.32833492815819,0.162137619091711,0,0.219550115291051,0.268412837520744,3.57492912559016,0.308713837137853,0.330418782983798,0.264450566663544,0,0,0,0,0.22237804384487,0,0,0,0,0,0.19496408711912,0,0,0,0.189667900953082,0.228497025219458,0,0.814605311381257,0.969762435838129,1.19230893813542,1.07502113111237,1.32849133181642,1.09899109488962,0.987177311374404,1.48226313543574,0.166845105716094,0,0,0,0.241177159752417,0,0,0,0.274561413188081,0,0,0,1.26289438973556,0.896987067609561,0.482443521363367,0,0.189491411770485,0.162964976442026,0.169745085775188,0.469380496577004,0.502518772325447,0.238043640886014,0.585400943573396,0,0.221464689648775,0.318909537314974,0.163863314715738,0.172684981865896,0,0,0,0.491764273019036,0,10.9174401191699,15.9407893765396,0.163934945376675,0,0,0.390438744296638,0.215423397732799,0,0,0.849229592366497,0.404810701674894,0.292255857911312,0.395287777946524,1.28528526568723,0.283880170416537,0.178065603667255,0.488660878060728,0.329940245945071,0,0,0,0.188605079755898,0.295301892880773,0,0,0.727067458955011,0,0,0,0,1.02131881726136,0,0.517434735131018,0.428674070063185,0.532020700926821,0.713475270408282,0.493647061806363,0.304464949114599,0.704015124191131,0,0.220528398054962,0.32977250588296,0,0.120625849856312,0.119372344003136,0,0,16.8737024829564,0.170870880797853,0.619160603889667,0,0,0.136694227721025,0.228778173206523,0.849892149969277,0.839708713941948,0.967399816630967,0,0.316335993581135,0,0,0.418176592028937,0,0.134864346384821,0.0826534557253359,0.26175594198403,0,0,0,0,0.165458490457098,0.194451188344048,0.387479470433193,0.168956125490778,0.58678619322877,0.2604087696879,0.419437377702843,0,0.288030006257865,0,0.202725215290164,0.205421914329655,0.129920822977795,0.537080087002444,0,0.360586348559907,0.443068581523732,0.201932899896295,0.0762068066549998,0,0,0.384847366561318,0,0.226730383615211,0,0.0897138566094757,0.167884616364078,0.19318959403219,0.187682475451182,0,0,0,0.564751842617067,0.920650473014354,0.572895513439397,1.03111909406213,2.74033007908257,0.755393897389701,0.675022500231806,1.35096360967266,1.35942722695261,2.5888015587591,0,0,0.341467211508268,0.729320151204882,0,0.367687016900028,0,0.618105171716683,0,0,0.50695859978048,0.377252682772152,0.37456602987953,0.256100609619477,0.17230640686684,0,0,0,0,0.147198920134397,0.685738504770831,0,0,0.290692833264657,0.0941093804153306,0.338458431566706,0.182927972872773,0.526139422875686,0,0,0.355905054372522,0.29551344712669,0,0.154936841185966,0.192906610981141,0.749431733813838,0,0.859484216193193,0,0.441182838239031,0.231867835620421
|short_description=p3@Abca2
}}

Revision as of 20:42, 4 August 2015

Short description:p3@Abca2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Abca2_5end
Coexpression cluster:MCL_coexpression_mm9:121
Association with transcript: 14bp_to_ENSMUST00000102919_5end
EntrezGene:11305
Link to Zenbu:ZENBU


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CAGE Expression

Sample

p3@Abca2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.60
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.52
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.42
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.70
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.45
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H22.28
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I92.61
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.86
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.01
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.71
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.53
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.88
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C34.28
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.01
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.40
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.90
Mouse Microglia, donor2.CNhs12634.11736-123E82.69
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.41
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.88
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D37.71
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F39.32
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D78.76
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.26
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.64
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E410.89
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E59.57
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I66.57
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.59
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.30
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.95
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.55
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.46
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.87
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B218.74
cerebellum, neonate N30.CNhs11135.1395-42I219.27
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.36
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A47.19
corpus striatum, adult.CNhs10487.19-21D88.24
corpus striatum, neonate N00.CNhs11226.630-43F10.25
cortex, adult.CNhs10473.12-14D54.17
cortex, neonate N30.CNhs11107.1392-42F22.81
diencephalon, adult.CNhs10482.20-12F210.60
diencephalon, neonate N30.CNhs11201.1388-42B211.36
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.61
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A23.61
epididymis, adult.CNhs10490.58-23B214.41
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.88
eyeball, neonate N01.CNhs11140.1532-43E70.51
eyeball, neonate N02.CNhs11205.1551-44G80.19
eyeball, neonate N16.CNhs11188.777-19A21.81
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C81.40
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.57
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.47
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E83.57
hippocampus, neonate N00.CNhs11228.627-43G10.31
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.81
kidney, embryo E18.CNhs11001.1288-20C70.97
kidney, neonate N00.CNhs11214.646-21G71.19
kidney, neonate N10.CNhs11206.758-6D51.08
kidney, neonate N20.CNhs11113.832-19I11.33
kidney, neonate N25.CNhs11122.1353-25F31.10
kidney, neonate N30.CNhs11203.1385-42H10.99
liver, adult pregnant day01.CNhs10466.508-5B21.48
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A31.26
liver, neonate N25.CNhs11198.1368-26H10.90
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.50
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.59
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C210.92
medulla oblongata, neonate N30.CNhs11200.1396-42A315.94
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.85
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I91.29
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.52
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.71
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.70
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C916.87
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.85
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.84
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.97
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.59
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.42
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.54
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.36
thymus, neonate N03.CNhs11137.2104-43C70.44
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.38
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.03
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.74
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.35
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.36
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.59
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.30
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron of the substantia nigra3.40e-073
raphe nuclei neuron3.91e-073

Uber anatomy
Ontology termp-valuen
regional part of nervous system2.10e-1954
neural tube7.99e-1752
neural rod7.99e-1752
future spinal cord7.99e-1752
neural keel7.99e-1752
central nervous system1.37e-1673
nervous system6.02e-1675
brain1.30e-1547
future brain1.30e-1547
regional part of brain1.50e-1446
neurectoderm9.00e-1464
neural plate9.00e-1464
presumptive neural plate9.00e-1464
ectoderm-derived structure3.91e-1395
ectoderm3.91e-1395
presumptive ectoderm3.91e-1395
ecto-epithelium2.00e-1273
posterior neural tube3.23e-1012
chordal neural plate3.23e-1012
segmental subdivision of hindbrain3.32e-096
segmental subdivision of nervous system3.32e-096
hindbrain3.32e-096
presumptive hindbrain3.32e-096
anterior neural tube5.21e-0940
regional part of midbrain5.47e-094
midbrain5.47e-094
presumptive midbrain5.47e-094
midbrain neural tube5.47e-094
tube1.27e-08114
structure with developmental contribution from neural crest1.63e-0892
anatomical conduit2.38e-08122
gray matter3.93e-0834
regional part of forebrain5.33e-0839
forebrain5.33e-0839
future forebrain5.33e-0839
pre-chordal neural plate1.12e-0749
brain grey matter2.80e-0729
regional part of telencephalon2.80e-0729
telencephalon2.80e-0729
substantia nigra3.40e-073
telencephalic nucleus3.40e-073
midbrain nucleus3.40e-073
neural nucleus3.40e-073
nucleus of brain3.40e-073
raphe nuclei3.91e-073
reticular formation3.91e-073
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