FFCP PHASE1:Mm9::chr12:16239095..16239116,+: Difference between revisions
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|id=chr12:16239095..16239116,+
|short_description=p@chr12:16239095..16239116,+
|description=CAGE_peak_at_chr12:16239095..16239116,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=11 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:16239095..16239116,+ | |||
|description=CAGE_peak_at_chr12:16239095..16239116,+ | |||
|id=chr12:16239095..16239116,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,1.22e-14,3;CL:0002614,4.48e-07,3;CL:0000117,7.87e-07,23;CL:0000337,7.87e-07,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!1.63e-14!63;UBERON:0004121!2.93e-11!102;UBERON:0000924!2.93e-11!102;UBERON:0006601!2.93e-11!102;UBERON:0007811!1.92e-09!86;UBERON:0000955!2.45e-09!50;UBERON:0006238!2.45e-09!50;UBERON:0002616!1.47e-08!49;UBERON:0000073!6.08e-08!75;UBERON:0001016!6.08e-08!75;UBERON:0000153!7.86e-08!94;UBERON:0001017!9.32e-08!73;UBERON:0005743!9.32e-08!73;UBERON:0002346!9.62e-08!71;UBERON:0003075!9.62e-08!71;UBERON:0007284!9.62e-08!71;UBERON:0001049!1.60e-07!52;UBERON:0005068!1.60e-07!52;UBERON:0006241!1.60e-07!52;UBERON:0007135!1.60e-07!52;UBERON:0003056!2.27e-07!49;UBERON:0000020!3.09e-07!12;UBERON:0001032!3.09e-07!12;UBERON:0004456!3.09e-07!12;UBERON:0002298!4.81e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004684,1.22e-14,3;UBERON:0002275,1.22e-14,3;UBERON:0003103,8.33e-12,43;UBERON:0002113,1.29e-08,14;UBERON:0003918,1.29e-08,14;UBERON:0011143,1.29e-08,14;UBERON:0005095,1.29e-08,14;UBERON:0007687,1.29e-08,14;UBERON:0000489,7.53e-08,21;UBERON:0002038,4.48e-07,3;UBERON:0009663,4.48e-07,3;UBERON:0009661,4.48e-07,3;UBERON:0000125,4.48e-07,3;UBERON:0002308,4.48e-07,3 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0,0,0.571301968807607,0,0,0,0,1.10115880999389,2.68143409978894,1.84327839907492,0,0,0,0.558365998002762,1.12552522006336,1.98637722109853,0.589257170947335,1.13897344639282,0,0,0.0755715601067855,0,0,0,0,0,0,0.280888840263504,0,0,0,0.845060518660083,0,0,0,0,0,0,0.68510327831436,0,0,0,0,0,0,0,0,0,0,0,0.323533699894818,0,0,0,0,0.209446706813455,0,0,0,0,0.149790639404823,0.457500602818626,0,0.521472960576829,0,0.62336413367868,0.162241263067758,0.101839363850316,0,1.0108910337347,0.841767423545896,0.130120442962704,0.229902104433473,0,0,0,0.384341160854549,0.187403449119458,1.55222022443409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.658239399653922,0.656669856316381,1.29710095273369,2.04679982395465,1.09775057645525,2.01309628140558,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210407459670956,3.16182685621286,5.01874503130647,17.4268587903926,11.2291419168838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321101179975584,0.117211686592203,0,0.504941854408746,0,0,0,0,0,0,0,0,0,1.28528526568723,0,0,0,0,0,0,0,0.188605079755898,0,0,0,0.363533729477506,0,0.316036757935816,0,0,1.02131881726136,0.18006109403131,0,0.857348140126369,0.354680467284547,0.356737635204141,0.164549020602121,0,0,0,0,0.16488625294148,0,0.120625849856312,0.119372344003136,0.164140899745061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0.25984164595559,0,0,0,0,0,0.0762068066549998,0,0,0,0,4.0811469050738,0,0,0,0,0,0,0,0,0,0,0.572895513439397,0.343706364687375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0.238436189947321,0,0,0,0,0.263069711437843,0,0,0,0.0985044823755635,0,0.154936841185966,0.192906610981141,0,0,0.214871054048298,0,0.220591419119515,0.463735671240843 | |phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0,0,0.571301968807607,0,0,0,0,1.10115880999389,2.68143409978894,1.84327839907492,0,0,0,0.558365998002762,1.12552522006336,1.98637722109853,0.589257170947335,1.13897344639282,0,0,0.0755715601067855,0,0,0,0,0,0,0.280888840263504,0,0,0,0.845060518660083,0,0,0,0,0,0,0.68510327831436,0,0,0,0,0,0,0,0,0,0,0,0.323533699894818,0,0,0,0,0.209446706813455,0,0,0,0,0.149790639404823,0.457500602818626,0,0.521472960576829,0,0.62336413367868,0.162241263067758,0.101839363850316,0,1.0108910337347,0.841767423545896,0.130120442962704,0.229902104433473,0,0,0,0.384341160854549,0.187403449119458,1.55222022443409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.658239399653922,0.656669856316381,1.29710095273369,2.04679982395465,1.09775057645525,2.01309628140558,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210407459670956,3.16182685621286,5.01874503130647,17.4268587903926,11.2291419168838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321101179975584,0.117211686592203,0,0.504941854408746,0,0,0,0,0,0,0,0,0,1.28528526568723,0,0,0,0,0,0,0,0.188605079755898,0,0,0,0.363533729477506,0,0.316036757935816,0,0,1.02131881726136,0.18006109403131,0,0.857348140126369,0.354680467284547,0.356737635204141,0.164549020602121,0,0,0,0,0.16488625294148,0,0.120625849856312,0.119372344003136,0.164140899745061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0.25984164595559,0,0,0,0,0,0.0762068066549998,0,0,0,0,4.0811469050738,0,0,0,0,0,0,0,0,0,0,0.572895513439397,0.343706364687375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0.238436189947321,0,0,0,0,0.263069711437843,0,0,0,0.0985044823755635,0,0.154936841185966,0.192906610981141,0,0,0.214871054048298,0,0.220591419119515,0.463735671240843 | ||
|short_description=p@chr12:16239095..16239116,+ | |||
}} | }} |
Latest revision as of 21:14, 4 August 2015
Short description: | p@chr12:16239095..16239116, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:16239095..16239116, + |
Coexpression cluster: | MCL_coexpression_mm9:11 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 1.22e-14 | 3 |
neuron of the substantia nigra | 4.48e-07 | 3 |
CNS neuron (sensu Vertebrata) | 7.87e-07 | 23 |
neuroblast (sensu Vertebrata) | 7.87e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
raphe nuclei | 1.22e-14 | 3 |
reticular formation | 1.22e-14 | 3 |
compound organ | 8.33e-12 | 43 |
kidney | 1.29e-08 | 14 |
kidney mesenchyme | 1.29e-08 | 14 |
upper urinary tract | 1.29e-08 | 14 |
kidney rudiment | 1.29e-08 | 14 |
kidney field | 1.29e-08 | 14 |
cavitated compound organ | 7.53e-08 | 21 |
substantia nigra | 4.48e-07 | 3 |
telencephalic nucleus | 4.48e-07 | 3 |
midbrain nucleus | 4.48e-07 | 3 |
neural nucleus | 4.48e-07 | 3 |
nucleus of brain | 4.48e-07 | 3 |