FFCP PHASE1:Mm9::chr4:133654814..133654827,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr4:133654814..133654827,+ to FFCP PHASE1:Mm9::chr4:133654814..133654827,+: NSchange) |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=6 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr4:133654814..133654827,+ | |||
|description=CAGE_peak_at_chr4:133654814..133654827,+ | |||
|id=chr4:133654814..133654827,+ | |||
|ontology_enrichment_celltype=CL:0000791!1.73e-25!9;CL:0000789!1.73e-25!9;CL:0002420!1.73e-25!9;CL:0002419!1.73e-25!9;CL:0000790!1.73e-25!9;CL:0000838!5.06e-24!12;CL:0000624!4.47e-22!8;CL:0000542!4.53e-22!13;CL:0000051!4.53e-22!13;CL:0000893!8.27e-22!6;CL:0002489!8.27e-22!6;CL:0000898!8.27e-22!6;CL:0000809!8.27e-22!6;CL:0000810!8.27e-22!6;CL:0000895!8.27e-22!6;CL:0000808!8.27e-22!6;CL:0000894!8.27e-22!6;CL:0000806!8.27e-22!6;CL:0000807!8.27e-22!6;CL:0000805!8.27e-22!6;CL:0002425!8.27e-22!6;CL:0002436!8.27e-22!6;CL:0002427!8.27e-22!6;CL:0002428!8.27e-22!6;CL:0002429!8.27e-22!6;CL:0002433!8.27e-22!6;CL:0002431!8.27e-22!6;CL:0002432!8.27e-22!6;CL:0000084!1.16e-20!11;CL:0000827!1.16e-20!11;CL:0000738!1.48e-16!17;CL:0002087!1.48e-16!17;CL:0002031!2.80e-16!25;CL:0000988!1.22e-14!32;CL:0002032!1.22e-14!32;CL:0000037!1.22e-14!32;CL:0000566!1.22e-14!32;CL:0000837!1.22e-14!32;CL:0002320!1.56e-09!46;CL:0000134!1.56e-09!46;CL:0000034!4.28e-08!97;CL:0000219!8.31e-08!54;CL:0000723!1.13e-07!91;CL:0000048!1.13e-07!91 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,2.06e-13,1;CL:0000236,2.06e-13,1;CL:0000826,2.06e-13,1;CL:0000355,2.79e-13,9 | |||
|ontology_enrichment_disease=DOID:0060100!6.18e-13!3;DOID:4045!6.18e-13!3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,3.73e-38,3;DOID:4045,3.73e-38,3;DOID:0050686,1.58e-19,6 | |||
|ontology_enrichment_uberon=UBERON:0002384!1.56e-09!46;UBERON:0002370!5.18e-07!23;UBERON:0000974!5.18e-07!23;UBERON:0004807!5.18e-07!23;UBERON:0005058!5.18e-07!23;UBERON:0003351!5.18e-07!23;UBERON:0009113!5.18e-07!23;UBERON:0003295!5.18e-07!23;UBERON:0009722!5.18e-07!23;UBERON:0005562!5.18e-07!23;UBERON:0007690!5.18e-07!23;UBERON:0004177!5.64e-07!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,2.79e-13,9;UBERON:0002036,2.79e-13,9;UBERON:0002385,2.79e-13,9;UBERON:0000486,2.79e-13,9;UBERON:0007503,2.79e-13,9;UBERON:0001015,2.79e-13,9;UBERON:0002329,2.79e-13,9;UBERON:0003082,2.79e-13,9;UBERON:0003059,2.79e-13,9;UBERON:0007282,2.79e-13,9;UBERON:0004290,2.79e-13,9;UBERON:0009618,2.79e-13,9;UBERON:0000383,5.02e-12,10;UBERON:0007524,5.36e-11,11;UBERON:0003077,5.36e-11,11;UBERON:0007285,5.36e-11,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0.387369970324729,0.281577444303333,0.468129052643987,0.34243593645101,0.797721589953364,0.171200729931206,0.0874204024189974,0.333109761815663,0,0,0.315462165358238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.4632907684227,10.9386948233332,8.89990364755457,28.2351114254887,9.56263678941824,6.311634589405,0,0,0,0,0,0,0,0,0,2.51673909086605,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0.11981512450592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170870880797853,0,0,0,0,0,0.169978429993855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0.387369970324729,0.281577444303333,0.468129052643987,0.34243593645101,0.797721589953364,0.171200729931206,0.0874204024189974,0.333109761815663,0,0,0.315462165358238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.4632907684227,10.9386948233332,8.89990364755457,28.2351114254887,9.56263678941824,6.311634589405,0,0,0,0,0,0,0,0,0,2.51673909086605,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0.11981512450592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170870880797853,0,0,0,0,0,0.169978429993855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr4:133654814..133654827,+ | |||
}} | }} |
Latest revision as of 22:22, 4 August 2015
Short description: | p@chr4:133654814..133654827, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:133654814..133654827, + |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 2.06e-13 | 1 |
B cell | 2.06e-13 | 1 |
pro-B cell | 2.06e-13 | 1 |
multi-potent skeletal muscle stem cell | 2.79e-13 | 9 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 2.79e-13 | 9 |
striated muscle tissue | 2.79e-13 | 9 |
muscle tissue | 2.79e-13 | 9 |
multilaminar epithelium | 2.79e-13 | 9 |
epithelial vesicle | 2.79e-13 | 9 |
musculature | 2.79e-13 | 9 |
somite | 2.79e-13 | 9 |
myotome | 2.79e-13 | 9 |
presomitic mesoderm | 2.79e-13 | 9 |
presumptive segmental plate | 2.79e-13 | 9 |
dermomyotome | 2.79e-13 | 9 |
trunk paraxial mesoderm | 2.79e-13 | 9 |
musculature of body | 5.02e-12 | 10 |
dense mesenchyme tissue | 5.36e-11 | 11 |
paraxial mesoderm | 5.36e-11 | 11 |
presumptive paraxial mesoderm | 5.36e-11 | 11 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 3.73e-38 | 3 |
muscle cancer | 3.73e-38 | 3 |
organ system cancer | 1.58e-19 | 6 |