FFCP PHASE1:Mm9::chr7:29157949..29157990,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=137 | |MCL_coexpression_id=137 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:29157949..29157990,+ | |||
|description=CAGE_peak_at_chr7:29157949..29157990,+ | |description=CAGE_peak_at_chr7:29157949..29157990,+ | ||
|id=chr7:29157949..29157990,+ | |id=chr7:29157949..29157990,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000838,7.00e-13,12;CL:0002563,2.31e-12,9;CL:0002251,2.31e-12,9;CL:0000239,3.21e-12,6;CL:0000677,3.21e-12,6;CL:0000584,3.21e-12,6;CL:0000791,4.00e-12,9;CL:0000789,4.00e-12,9;CL:0002420,4.00e-12,9;CL:0002419,4.00e-12,9;CL:0000790,4.00e-12,9;CL:0000542,7.41e-12,13;CL:0000051,7.41e-12,13;CL:0000075,1.69e-10,7;CL:0000084,6.81e-10,11;CL:0000827,6.81e-10,11;CL:0000624,3.50e-09,8;CL:0000738,5.87e-09,17;CL:0002087,5.87e-09,17;CL:0000066,4.05e-08,25;CL:0000223,9.43e-08,20;CL:0002076,2.41e-07,15 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2=DOID:0060100,6.07e-14,3;DOID:4045,6.07e-14,3;DOID:0050686,3.23e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0004177!2.54e-07!29;UBERON:0002370!2.87e-07!23;UBERON:0000974!2.87e-07!23;UBERON:0004807!2.87e-07!23;UBERON:0005058!2.87e-07!23;UBERON:0003351!2.87e-07!23;UBERON:0009113!2.87e-07!23;UBERON:0003295!2.87e-07!23;UBERON:0009722!2.87e-07!23;UBERON:0005562!2.87e-07!23;UBERON:0007690!2.87e-07!23;UBERON:0000485!4.65e-07!11 | |ontology_enrichment_uberon=UBERON:0004177!2.54e-07!29;UBERON:0002370!2.87e-07!23;UBERON:0000974!2.87e-07!23;UBERON:0004807!2.87e-07!23;UBERON:0005058!2.87e-07!23;UBERON:0003351!2.87e-07!23;UBERON:0009113!2.87e-07!23;UBERON:0003295!2.87e-07!23;UBERON:0009722!2.87e-07!23;UBERON:0005562!2.87e-07!23;UBERON:0007690!2.87e-07!23;UBERON:0000485!4.65e-07!11 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,2.31e-12,9;UBERON:0004808,2.31e-12,9;UBERON:0001277,2.31e-12,9;UBERON:0000485,4.37e-10,11;UBERON:0001242,1.66e-08,13;UBERON:0001262,1.66e-08,13;UBERON:0004786,1.66e-08,13;UBERON:0000490,8.11e-08,66;UBERON:0000344,2.41e-07,15 | |||
|phase1_expression=0.320297694209588,1.04692622291808,1.36499771816861,3.0246421130683,4.00716583957078,0.33575854382378,0,3.61545305636414,0.84473233291,1.87251621057595,0.171217968225505,0,0.856003649656029,1.04904482902797,0,0,0,0.946386496074713,0.548457734422955,0.42438965179803,0,0.0992909512008853,0,0,0.45881856213434,1.14846392823004,0,0.646413698057667,0,0.252030129759931,0,0,0,0,0.577703239502549,0.166234645358492,1.63335485009895,1.67412652294763,2.3440060335714,1.0470474879476,6.47054636834116,5.46436387966757,0.971020706062307,0,0.101376931219515,0,0,0.218025156380447,0.439372365468944,0.194429899074283,0,0,2.01339127269284,1.45072428402269,1.00828139742739,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919218786610021,0,0,0,0,0.0914876436024097,0.52091337055676,0,0.56276261003168,0,0,0,0,0,0.0755715601067855,14.4932244350839,0.860423876981386,0,0,0,0,0.140444420131752,0,0,0,0.985903938436763,0,0,0,0,0,0.505524445014783,0,0,0,0,0.304465478312141,0,0,0,0,0,0,0,0.161766849947409,0,0,0,0,0,0,0.599075622529601,1.19980546198682,0.635351135365324,0.149790639404823,0,0.125654352112864,0,0,0,0,0.305518091550949,0.124406970610093,0,0,0,0.229902104433473,0,0,0,0,0,0,0.215567992932842,0,0,0,0.278047249225598,0.348252166522167,0,0,0,0.257347907114715,0,0,0.469052119962192,0.180062061461015,0,0,0,0,0,0.116765342367169,0,0.164167464079095,0.162137619091711,0.292399974850665,0,0,0,0,0.330418782983798,0,0.213288250535234,0,0.257734922644187,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0.379335801906163,0.228497025219458,0,0,0.387904974335251,0.0701358198903186,0.0632365371242573,0,0,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0.169745085775188,0,0.167506257441816,0,0,0,0,0,0.163863314715738,0.172684981865896,0.433947175744535,0,0,0,0,0,0,0,0,0,0,0,0,0.445597348164788,0.283076530788832,0.404810701674894,0,0,0.321321316421807,0,0.178065603667255,0.162886959353576,0,0,0,0,0.188605079755898,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0,0,0.322928853391811,0.0603129249281559,0,0,0,0,0.170870880797853,0,0.185194527369712,0.188368457004691,0,0.228778173206523,0.679913719975421,0.69975726161829,0.967399816630967,0,0,0.203319467126849,0.216010681643603,0.209088296014469,0,0.134864346384821,0.0826534557253359,0,0,0,0,0.149516546043979,0,0.194451188344048,0,0.168956125490778,0.117357238645754,0.2604087696879,0.524296722128554,0,0,0.948033361884535,0,0,0.25984164595559,0.537080087002444,0.79472541912506,0.360586348559907,0.295379054349154,1.00966449948148,0.685861259894999,0.907435666231565,0.584747284438515,0.673482891482306,0.467507608726276,0,0,0,0,0,0,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0.103787347584177,0,0.170733605754134,0,0.209613162627982,0.183843508450014,0.222246727801615,0,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0,0,0,0,0,0,0,0,0.188218760830661,0,0.365855945745545,0,0,0,0.237270036248348,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0.320297694209588,1.04692622291808,1.36499771816861,3.0246421130683,4.00716583957078,0.33575854382378,0,3.61545305636414,0.84473233291,1.87251621057595,0.171217968225505,0,0.856003649656029,1.04904482902797,0,0,0,0.946386496074713,0.548457734422955,0.42438965179803,0,0.0992909512008853,0,0,0.45881856213434,1.14846392823004,0,0.646413698057667,0,0.252030129759931,0,0,0,0,0.577703239502549,0.166234645358492,1.63335485009895,1.67412652294763,2.3440060335714,1.0470474879476,6.47054636834116,5.46436387966757,0.971020706062307,0,0.101376931219515,0,0,0.218025156380447,0.439372365468944,0.194429899074283,0,0,2.01339127269284,1.45072428402269,1.00828139742739,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919218786610021,0,0,0,0,0.0914876436024097,0.52091337055676,0,0.56276261003168,0,0,0,0,0,0.0755715601067855,14.4932244350839,0.860423876981386,0,0,0,0,0.140444420131752,0,0,0,0.985903938436763,0,0,0,0,0,0.505524445014783,0,0,0,0,0.304465478312141,0,0,0,0,0,0,0,0.161766849947409,0,0,0,0,0,0,0.599075622529601,1.19980546198682,0.635351135365324,0.149790639404823,0,0.125654352112864,0,0,0,0,0.305518091550949,0.124406970610093,0,0,0,0.229902104433473,0,0,0,0,0,0,0.215567992932842,0,0,0,0.278047249225598,0.348252166522167,0,0,0,0.257347907114715,0,0,0.469052119962192,0.180062061461015,0,0,0,0,0,0.116765342367169,0,0.164167464079095,0.162137619091711,0.292399974850665,0,0,0,0,0.330418782983798,0,0.213288250535234,0,0.257734922644187,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0.379335801906163,0.228497025219458,0,0,0.387904974335251,0.0701358198903186,0.0632365371242573,0,0,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0.169745085775188,0,0.167506257441816,0,0,0,0,0,0.163863314715738,0.172684981865896,0.433947175744535,0,0,0,0,0,0,0,0,0,0,0,0,0.445597348164788,0.283076530788832,0.404810701674894,0,0,0.321321316421807,0,0.178065603667255,0.162886959353576,0,0,0,0,0.188605079755898,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0,0,0.322928853391811,0.0603129249281559,0,0,0,0,0.170870880797853,0,0.185194527369712,0.188368457004691,0,0.228778173206523,0.679913719975421,0.69975726161829,0.967399816630967,0,0,0.203319467126849,0.216010681643603,0.209088296014469,0,0.134864346384821,0.0826534557253359,0,0,0,0,0.149516546043979,0,0.194451188344048,0,0.168956125490778,0.117357238645754,0.2604087696879,0.524296722128554,0,0,0.948033361884535,0,0,0.25984164595559,0.537080087002444,0.79472541912506,0.360586348559907,0.295379054349154,1.00966449948148,0.685861259894999,0.907435666231565,0.584747284438515,0.673482891482306,0.467507608726276,0,0,0,0,0,0,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0.103787347584177,0,0.170733605754134,0,0.209613162627982,0.183843508450014,0.222246727801615,0,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0,0,0,0,0,0,0,0,0.188218760830661,0,0.365855945745545,0,0,0,0.237270036248348,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr7:29157949..29157990,+ | |short_description=p@chr7:29157949..29157990,+ | ||
}} | }} |
Latest revision as of 22:53, 4 August 2015
Short description: | p@chr7:29157949..29157990, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:29157949..29157990, + |
Coexpression cluster: | MCL_coexpression_mm9:137 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 7.00e-13 | 12 |
intestinal epithelial cell | 2.31e-12 | 9 |
epithelial cell of alimentary canal | 2.31e-12 | 9 |
brush border epithelial cell | 3.21e-12 | 6 |
gut absorptive cell | 3.21e-12 | 6 |
enterocyte | 3.21e-12 | 6 |
mature alpha-beta T cell | 4.00e-12 | 9 |
alpha-beta T cell | 4.00e-12 | 9 |
immature T cell | 4.00e-12 | 9 |
mature T cell | 4.00e-12 | 9 |
immature alpha-beta T cell | 4.00e-12 | 9 |
lymphocyte | 7.41e-12 | 13 |
common lymphoid progenitor | 7.41e-12 | 13 |
columnar/cuboidal epithelial cell | 1.69e-10 | 7 |
T cell | 6.81e-10 | 11 |
pro-T cell | 6.81e-10 | 11 |
CD4-positive, alpha-beta T cell | 3.50e-09 | 8 |
leukocyte | 5.87e-09 | 17 |
nongranular leukocyte | 5.87e-09 | 17 |
epithelial cell | 4.05e-08 | 25 |
endodermal cell | 9.43e-08 | 20 |
endo-epithelial cell | 2.41e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 2.31e-12 | 9 |
gastrointestinal system epithelium | 2.31e-12 | 9 |
intestinal epithelium | 2.31e-12 | 9 |
simple columnar epithelium | 4.37e-10 | 11 |
intestinal mucosa | 1.66e-08 | 13 |
wall of intestine | 1.66e-08 | 13 |
gastrointestinal system mucosa | 1.66e-08 | 13 |
unilaminar epithelium | 8.11e-08 | 66 |
mucosa | 2.41e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 6.07e-14 | 3 |
muscle cancer | 6.07e-14 | 3 |
organ system cancer | 3.23e-07 | 6 |