FFCP PHASE1:Mm9::chr6:117123612..117123624,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=134 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:117123612..117123624,+ | |||
|description=CAGE_peak_at_chr6:117123612..117123624,+ | |description=CAGE_peak_at_chr6:117123612..117123624,+ | ||
|id=chr6:117123612..117123624,+ | |id=chr6:117123612..117123624,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000192,7.86e-23,3;CL:0000359,7.86e-23,3;CL:0002539,7.86e-23,3;CL:0000514,7.86e-23,3;CL:0000680,9.54e-12,6;CL:0000187,9.54e-12,6;CL:0000056,9.54e-12,6;CL:0002293,1.27e-10,3;CL:0000222,3.75e-10,7;CL:0000355,5.12e-08,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001135,7.86e-23,3;UBERON:0004237,7.86e-23,3;UBERON:0004695,7.86e-23,3;UBERON:0002111,7.86e-23,3;UBERON:0004178,7.86e-23,3;UBERON:0000947,2.66e-17,4;UBERON:0001637,2.66e-17,4;UBERON:0004573,2.66e-17,4;UBERON:0003509,2.66e-17,4;UBERON:0004571,2.66e-17,4;UBERON:0010191,2.66e-17,4;UBERON:0004572,2.66e-17,4;UBERON:0000055,5.67e-14,5;UBERON:0007500,5.67e-14,5;UBERON:0001981,5.67e-14,5;UBERON:0002049,5.67e-14,5;UBERON:0007798,5.67e-14,5;UBERON:0004537,5.67e-14,5;UBERON:0006965,5.67e-14,5;UBERON:0001134,5.12e-08,9;UBERON:0002036,5.12e-08,9;UBERON:0002385,5.12e-08,9;UBERON:0000486,5.12e-08,9;UBERON:0007503,5.12e-08,9;UBERON:0001015,5.12e-08,9;UBERON:0002329,5.12e-08,9;UBERON:0003082,5.12e-08,9;UBERON:0003059,5.12e-08,9;UBERON:0007282,5.12e-08,9;UBERON:0004290,5.12e-08,9;UBERON:0009618,5.12e-08,9;UBERON:0000383,2.88e-07,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.39921408534059,2.73717714292689,2.38610777810186,0.782391344348039,0,0,0,0.279972843250725,0,0,0,0,0,0,0,0,0,0,0.338844532069132,0,0.449949858640699,0.988866362566974,0,0,0,0,0.405017814995072,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0.860423876981386,0.679971333707751,0,0.649776417447669,0.896053774194671,0,7.6693645160126,8.57293815189467,8.12681021373782,0,1.28326477414318,2.54805239706646,0,0,0,0,0.11418387971906,0,0,0.346970653532272,0,0,0.150722640552623,0.117588707135705,0,0,0.144599356919912,0,0.323533699894818,0,0,0,0,0.41889341362691,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0.252722758433675,0.210441855886474,0.260240885925407,0,0,0,0.0680364991513279,0,0.0937017245597288,0,0,0.189106080167819,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0.180062061461015,0.710234206755631,0,0,0,0,0,0,0.164167464079095,0.162137619091711,0,0,0,0,0,0,0,0.213288250535234,0,0.128867461322093,0,0,0,0,0,0.251335208800269,0,0,0.898819408654221,0,0,0.189667900953082,0.114248512609729,0,0,0.193952487167626,0,0.0632365371242573,0,0.156998727841375,0.246794327843601,0.296452627087149,0,0,0,0,0,0,0,1.13494658742525,0,1.43768206527355,0,0.624075346229121,0,0,2.41221760681684,0,0,0,0.169745085775188,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0,0,0.117211686592203,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0.162886959353576,0.494910368917606,0,0,0.302323556964751,0,0,0,0,0,0.712994756769443,0,0,1.03135543248187,0,0,0.129358683782755,0,0.177340233642274,0.178368817602071,0,0,0,0.21183207086382,0,0,0,0,0,0,0,0,0,0.82554747185289,0.185194527369712,0.376736914009382,0.27338845544205,0.228778173206523,0,0,0,0.954670618015114,0,0,0.108005340821801,0.209088296014469,0,0.134864346384821,0.165306911450672,0.26175594198403,0,0,0,0,0,0.583353565032143,0.387479470433193,0.675824501963113,0.58678619322877,0,0,0,0,0.632022241256357,0.405450430580328,0.410843828659309,0,0,0.198681354781265,0.240390899039938,0,0,0,0.201652370273681,0.194915761479505,0.288635524920988,0,0,0,0,0,0.19318959403219,0,0.549454872801795,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0,0,0.0640251524048693,0.17230640686684,0,0,0.192909220463705,0,0,0,0,0,0,0,0,0,0,0,0,0.237270036248348,0,0,0.154936841185966,0.192906610981141,0.249810577937946,0,0.214871054048298,0.191288332068843,0.220591419119515,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.39921408534059,2.73717714292689,2.38610777810186,0.782391344348039,0,0,0,0.279972843250725,0,0,0,0,0,0,0,0,0,0,0.338844532069132,0,0.449949858640699,0.988866362566974,0,0,0,0,0.405017814995072,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0.860423876981386,0.679971333707751,0,0.649776417447669,0.896053774194671,0,7.6693645160126,8.57293815189467,8.12681021373782,0,1.28326477414318,2.54805239706646,0,0,0,0,0.11418387971906,0,0,0.346970653532272,0,0,0.150722640552623,0.117588707135705,0,0,0.144599356919912,0,0.323533699894818,0,0,0,0,0.41889341362691,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0.252722758433675,0.210441855886474,0.260240885925407,0,0,0,0.0680364991513279,0,0.0937017245597288,0,0,0.189106080167819,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0.180062061461015,0.710234206755631,0,0,0,0,0,0,0.164167464079095,0.162137619091711,0,0,0,0,0,0,0,0.213288250535234,0,0.128867461322093,0,0,0,0,0,0.251335208800269,0,0,0.898819408654221,0,0,0.189667900953082,0.114248512609729,0,0,0.193952487167626,0,0.0632365371242573,0,0.156998727841375,0.246794327843601,0.296452627087149,0,0,0,0,0,0,0,1.13494658742525,0,1.43768206527355,0,0.624075346229121,0,0,2.41221760681684,0,0,0,0.169745085775188,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0,0,0.117211686592203,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0.162886959353576,0.494910368917606,0,0,0.302323556964751,0,0,0,0,0,0.712994756769443,0,0,1.03135543248187,0,0,0.129358683782755,0,0.177340233642274,0.178368817602071,0,0,0,0.21183207086382,0,0,0,0,0,0,0,0,0,0.82554747185289,0.185194527369712,0.376736914009382,0.27338845544205,0.228778173206523,0,0,0,0.954670618015114,0,0,0.108005340821801,0.209088296014469,0,0.134864346384821,0.165306911450672,0.26175594198403,0,0,0,0,0,0.583353565032143,0.387479470433193,0.675824501963113,0.58678619322877,0,0,0,0,0.632022241256357,0.405450430580328,0.410843828659309,0,0,0.198681354781265,0.240390899039938,0,0,0,0.201652370273681,0.194915761479505,0.288635524920988,0,0,0,0,0,0.19318959403219,0,0.549454872801795,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0,0,0.0640251524048693,0.17230640686684,0,0,0.192909220463705,0,0,0,0,0,0,0,0,0,0,0,0,0.237270036248348,0,0,0.154936841185966,0.192906610981141,0.249810577937946,0,0.214871054048298,0.191288332068843,0.220591419119515,0 | ||
|short_description=p@chr6:117123612..117123624,+ | |short_description=p@chr6:117123612..117123624,+ | ||
}} | }} |
Latest revision as of 23:32, 4 August 2015
Short description: | p@chr6:117123612..117123624, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:117123612..117123624, + |
Coexpression cluster: | MCL_coexpression_mm9:134 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 7.86e-23 | 3 |
vascular associated smooth muscle cell | 7.86e-23 | 3 |
aortic smooth muscle cell | 7.86e-23 | 3 |
smooth muscle myoblast | 7.86e-23 | 3 |
muscle precursor cell | 9.54e-12 | 6 |
muscle cell | 9.54e-12 | 6 |
myoblast | 9.54e-12 | 6 |
epithelial cell of thymus | 1.27e-10 | 3 |
mesodermal cell | 3.75e-10 | 7 |
multi-potent skeletal muscle stem cell | 5.12e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
smooth muscle tissue | 7.86e-23 | 3 |
blood vessel smooth muscle | 7.86e-23 | 3 |
arterial system smooth muscle | 7.86e-23 | 3 |
artery smooth muscle tissue | 7.86e-23 | 3 |
aorta smooth muscle tissue | 7.86e-23 | 3 |
aorta | 2.66e-17 | 4 |
artery | 2.66e-17 | 4 |
systemic artery | 2.66e-17 | 4 |
arterial blood vessel | 2.66e-17 | 4 |
systemic arterial system | 2.66e-17 | 4 |
aortic system | 2.66e-17 | 4 |
arterial system | 2.66e-17 | 4 |
vessel | 5.67e-14 | 5 |
epithelial tube open at both ends | 5.67e-14 | 5 |
blood vessel | 5.67e-14 | 5 |
vasculature | 5.67e-14 | 5 |
vascular system | 5.67e-14 | 5 |
blood vasculature | 5.67e-14 | 5 |
vascular cord | 5.67e-14 | 5 |
skeletal muscle tissue | 5.12e-08 | 9 |
striated muscle tissue | 5.12e-08 | 9 |
muscle tissue | 5.12e-08 | 9 |
multilaminar epithelium | 5.12e-08 | 9 |
epithelial vesicle | 5.12e-08 | 9 |
musculature | 5.12e-08 | 9 |
somite | 5.12e-08 | 9 |
myotome | 5.12e-08 | 9 |
presomitic mesoderm | 5.12e-08 | 9 |
presumptive segmental plate | 5.12e-08 | 9 |
dermomyotome | 5.12e-08 | 9 |
trunk paraxial mesoderm | 5.12e-08 | 9 |
musculature of body | 2.88e-07 | 10 |