FFCP PHASE1:Mm9::chr12:34000258..34000276,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=380753|HGNC=|MCL_coexpression_id=0|UniProt=D3Z7I2|association_with_transcript=0bp_to_ENSMUST00000145589,ENSMUST00000154742_5end|description=CAGE_peak_2_at_Atxn7l1_5end|id=chr12:34000258..34000276,+|ontology_enrichment_celltype=CL:0000988!2.94e-08!32;CL:0002032!2.94e-08!32;CL:0000037!2.94e-08!32;CL:0000566!2.94e-08!32;CL:0000837!2.94e-08!32;CL:0002031!1.05e-07!25|ontology_enrichment_celltype_v019_2=CL:0000988,1.35e-10,32;CL:0002032,1.35e-10,32;CL:0000037,1.35e-10,32;CL:0000837,1.35e-10,32;CL:0002031,3.39e-10,25;CL:0002320,2.69e-07,46;CL:0000134,2.69e-07,46;CL:0000791,8.52e-07,9;CL:0000789,8.52e-07,9;CL:0002420,8.52e-07,9;CL:0002419,8.52e-07,9;CL:0000790,8.52e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002405!3.25e-18!70;UBERON:0002193!1.21e-14!48;UBERON:0005057!4.78e-14!51;UBERON:0002390!5.44e-14!45;UBERON:0003061!5.44e-14!45;UBERON:0004177!3.85e-11!29;UBERON:0005911!2.28e-10!69;UBERON:0003929!3.57e-10!55;UBERON:0003081!3.31e-08!88;UBERON:0002370!3.58e-08!23;UBERON:0000974!3.58e-08!23;UBERON:0004807!3.58e-08!23;UBERON:0005058!3.58e-08!23;UBERON:0003351!3.58e-08!23;UBERON:0009113!3.58e-08!23;UBERON:0003295!3.58e-08!23;UBERON:0009722!3.58e-08!23;UBERON:0005562!3.58e-08!23;UBERON:0007690!3.58e-08!23;UBERON:0000490!1.17e-07!66;UBERON:0006562!2.34e-07!24;UBERON:0003408!2.34e-07!24;UBERON:0001557!2.34e-07!24;UBERON:0001042!2.34e-07!24;UBERON:0008814!2.34e-07!24;UBERON:0009145!2.34e-07!24;UBERON:0002368!5.23e-07!60|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.05e-18,45;UBERON:0003061,2.05e-18,45;UBERON:0002193,8.88e-18,48;UBERON:0002405,8.88e-18,48;UBERON:0004177,4.41e-15,29;UBERON:0005057,4.41e-15,29;UBERON:0000077,8.70e-12,35;UBERON:0002370,4.88e-11,23;UBERON:0000974,4.88e-11,23;UBERON:0004807,4.88e-11,23;UBERON:0005058,4.88e-11,23;UBERON:0003351,4.88e-11,23;UBERON:0009113,4.88e-11,23;UBERON:0003295,4.88e-11,23;UBERON:0009722,4.88e-11,23;UBERON:0005562,4.88e-11,23;UBERON:0007690,4.88e-11,23;UBERON:0006562,2.86e-10,24;UBERON:0003408,2.86e-10,24;UBERON:0001557,2.86e-10,24;UBERON:0001042,2.86e-10,24;UBERON:0008814,2.86e-10,24;UBERON:0009145,2.86e-10,24;UBERON:0003929,8.13e-10,55;UBERON:0001041,3.09e-09,80;UBERON:0003081,5.33e-09,87;UBERON:0000490,7.56e-09,66;UBERON:0005911,2.34e-08,69;UBERON:0000072,2.44e-08,27;UBERON:0002384,2.69e-07,46;UBERON:0002368,4.63e-07,60|phase1_expression=0,0.348975407639361,0.909998478779072,0.60492842261366,1.00179145989269,0.839396359559449,1.40167584357315,9.16775596435192,3.801295498095,3.5109678948299,3.08192342805909,2.31339261086476,18.318478102639,19.7570109466934,9.32707333083856,16.8054471933556,18.88817070946,5.8360500591274,5.34746291062381,5.09267582157636,11.3107575900923,0.992909512008853,1.82839852397255,0.799962113967033,0.91763712426868,0,0.430761996159075,0,0.190023419456374,0.504060259519861,0.665191531965914,13.3356441426523,14.7615549020297,0,0.288851619751275,0.498703936075477,0.204169356262369,44.3643528581122,24.2213956802378,45.5465657257204,66.4701581475046,39.6166381275899,38.8408282424923,0,0,0,0,0,0,0,0,0,2.85230430298152,11.6057942721815,9.74672017513146,0,0,0,0,0,0,0,0,0.449949858640699,1.97773272513395,2.8419204597844,0,0,0,0.135005938331691,0,0,0,0,0,0,0,0,0.153606533256243,0.131886287730194,0,0,0,0,0,0,0,0,0.151452386666368,0,2.02905142091174,0.860423876981386,0,1.07940638327563,0,0,4.49422144421606,0,0,0,0,0,0,0,0,0,0,2.74041311325744,17.8667139716548,0.593768556259299,0.693941307064543,0.913396434936424,0.230615497256059,0.452167921657868,0.470354828542819,0,4.20231445148436,1.01219549843938,15.0383793831479,1.61766849947409,10.6003928860989,10.6672555689749,0,0,0,1.27728527604296,2.27648736561249,2.39961092397363,1.14363204365758,0,0,0,0.173824320192276,0,0,0,0.305518091550949,7.96204611904595,0.252722758433675,0.420883711772948,0.130120442962704,0,0.180062129805349,0.60281927134286,0.0680364991513279,0.12811372028485,0.0937017245597288,0,0.646703978798527,0,0,0,0,0.348252166522167,0,0,1.40442637462647,2.57347907114715,0.852490498186778,0.621377317606506,0.469052119962192,0.36012412292203,0.473489471170421,0.393528463494808,0.154267112887378,0.465067889500816,0,0.233530684734339,0,0.32833492815819,0.243206428637567,0.438599962275997,1.53685080703735,1.07365135008297,0,0,2.31293148088659,0.793351699990633,0,0,0.128867461322093,0.403367049246685,0,0.380451252225118,1.42358718463353,0.494096864172033,0.251335208800269,0.198956472041151,0.58489226135736,0,1.08069024937347,0.597423819763102,0.189667900953082,0.571242563048644,0,0.203651327845314,0,0.0701358198903186,0.189709611372772,0.295220295959204,0.31399745568275,0.370191491765402,0.889357881261447,11.5123122944105,13.9556886530374,12.367416181167,15.6202293469147,14.9529839046498,7.89340140522401,12.9463261852865,8.10676133875177,3.29473695825698,5.75072826109418,2.23284568601102,1.5601883655728,0.252578877947112,0.896987067609561,0.482443521363367,3.14080423283228,0.189491411770485,0.325929952884052,0,0.234690248288502,0.670025029767263,0.714130922658041,0.195133647857799,1.10344600874334,0.8858587585951,0.637819074629948,3.27726629431476,1.72684981865896,1.59113964439663,1.50791283939272,7.61467957346193,1.47529281905711,1.37968373152366,0,0,0,1.00988370881749,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0.534196811001766,0,0.329940245945071,0,0.242780636154981,0,0,0,0,0.258428293168221,0,0.356497378384721,0,0,0,0.340439605753788,0,0,0,0.177340233642274,0,0,0.304464949114599,0.469343416127421,0,0,0.49465875882444,0.645857706783622,0.0603129249281559,0.238744688006273,0.328281799490123,1.1659233465194,0,15.5492501526046,1.65109494370578,8.33375373163703,19.2135826144785,25.9719032669948,16.0144721244566,1.69978429993855,1.53946597556024,2.48759952847963,0,0.158167996790568,1.21991680276109,0.108005340821801,0.418176592028937,0.436725127492355,0.404593039154462,0.247960367176008,0,0.259229946583586,0,124.576139449206,0.149516546043979,0,0,0.129159823477731,0,0.704143431874524,0.13020438484395,0,14.4950472495604,38.0199608260382,44.5575680085731,0.608175645870493,2.56777392912068,4.67714962720062,9.13036147904155,21.0602236068141,16.7071674832757,17.131985152251,23.1213170381258,21.261699056745,29.0379413194101,35.7670422314891,28.0938577589762,34.4786861435628,0,0,0,0,0.386379188064381,0.375364950902364,0.73260649706906,0.214368379079066,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0.103787347584177,1.19707462020309,1.70733605754134,1.70174701947806,1.04806581313991,1.47074806760011,1.55572709461131,2.06035057238894,2.24643446714271,0.758091635291392,1.2673964994512,0.943131706930381,1.31098110457835,1.28050304809739,1.26358031702349,0.952587382566147,1.15884325944855,1.15745532278223,1.64834360321323,0.735994600671987,0.342869252385415,0.70990322463735,1.1921809497366,1.0174249164263,1.03520318456864,1.18460451048347,0.73171189149109,1.57841826862706,1.49384525230448,0.561142271657738,1.18635018124174,1.0835493061312,1.22769312950907,0.464810523557898,2.12197272079256,0.749431733813838,0,1.07435527024149,0.191288332068843,1.76473135295612,3.47801753430632|short_description=p2@Atxn7l1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:380753 | |||
|HGNC= | |||
|MCL_coexpression_id=0 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:D3Z7I2 | |||
|association_with_transcript=0bp_to_ENSMUST00000145589,ENSMUST00000154742_5end | |||
|cluster_id=chr12:34000258..34000276,+ | |||
|description=CAGE_peak_2_at_Atxn7l1_5end | |||
|id=chr12:34000258..34000276,+ | |||
|ontology_enrichment_celltype=CL:0000988!2.94e-08!32;CL:0002032!2.94e-08!32;CL:0000037!2.94e-08!32;CL:0000566!2.94e-08!32;CL:0000837!2.94e-08!32;CL:0002031!1.05e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.35e-10,32;CL:0002032,1.35e-10,32;CL:0000037,1.35e-10,32;CL:0000837,1.35e-10,32;CL:0002031,3.39e-10,25;CL:0002320,2.69e-07,46;CL:0000134,2.69e-07,46;CL:0000791,8.52e-07,9;CL:0000789,8.52e-07,9;CL:0002420,8.52e-07,9;CL:0002419,8.52e-07,9;CL:0000790,8.52e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!3.25e-18!70;UBERON:0002193!1.21e-14!48;UBERON:0005057!4.78e-14!51;UBERON:0002390!5.44e-14!45;UBERON:0003061!5.44e-14!45;UBERON:0004177!3.85e-11!29;UBERON:0005911!2.28e-10!69;UBERON:0003929!3.57e-10!55;UBERON:0003081!3.31e-08!88;UBERON:0002370!3.58e-08!23;UBERON:0000974!3.58e-08!23;UBERON:0004807!3.58e-08!23;UBERON:0005058!3.58e-08!23;UBERON:0003351!3.58e-08!23;UBERON:0009113!3.58e-08!23;UBERON:0003295!3.58e-08!23;UBERON:0009722!3.58e-08!23;UBERON:0005562!3.58e-08!23;UBERON:0007690!3.58e-08!23;UBERON:0000490!1.17e-07!66;UBERON:0006562!2.34e-07!24;UBERON:0003408!2.34e-07!24;UBERON:0001557!2.34e-07!24;UBERON:0001042!2.34e-07!24;UBERON:0008814!2.34e-07!24;UBERON:0009145!2.34e-07!24;UBERON:0002368!5.23e-07!60 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.05e-18,45;UBERON:0003061,2.05e-18,45;UBERON:0002193,8.88e-18,48;UBERON:0002405,8.88e-18,48;UBERON:0004177,4.41e-15,29;UBERON:0005057,4.41e-15,29;UBERON:0000077,8.70e-12,35;UBERON:0002370,4.88e-11,23;UBERON:0000974,4.88e-11,23;UBERON:0004807,4.88e-11,23;UBERON:0005058,4.88e-11,23;UBERON:0003351,4.88e-11,23;UBERON:0009113,4.88e-11,23;UBERON:0003295,4.88e-11,23;UBERON:0009722,4.88e-11,23;UBERON:0005562,4.88e-11,23;UBERON:0007690,4.88e-11,23;UBERON:0006562,2.86e-10,24;UBERON:0003408,2.86e-10,24;UBERON:0001557,2.86e-10,24;UBERON:0001042,2.86e-10,24;UBERON:0008814,2.86e-10,24;UBERON:0009145,2.86e-10,24;UBERON:0003929,8.13e-10,55;UBERON:0001041,3.09e-09,80;UBERON:0003081,5.33e-09,87;UBERON:0000490,7.56e-09,66;UBERON:0005911,2.34e-08,69;UBERON:0000072,2.44e-08,27;UBERON:0002384,2.69e-07,46;UBERON:0002368,4.63e-07,60 | |||
|phase1_expression=0,0.348975407639361,0.909998478779072,0.60492842261366,1.00179145989269,0.839396359559449,1.40167584357315,9.16775596435192,3.801295498095,3.5109678948299,3.08192342805909,2.31339261086476,18.318478102639,19.7570109466934,9.32707333083856,16.8054471933556,18.88817070946,5.8360500591274,5.34746291062381,5.09267582157636,11.3107575900923,0.992909512008853,1.82839852397255,0.799962113967033,0.91763712426868,0,0.430761996159075,0,0.190023419456374,0.504060259519861,0.665191531965914,13.3356441426523,14.7615549020297,0,0.288851619751275,0.498703936075477,0.204169356262369,44.3643528581122,24.2213956802378,45.5465657257204,66.4701581475046,39.6166381275899,38.8408282424923,0,0,0,0,0,0,0,0,0,2.85230430298152,11.6057942721815,9.74672017513146,0,0,0,0,0,0,0,0,0.449949858640699,1.97773272513395,2.8419204597844,0,0,0,0.135005938331691,0,0,0,0,0,0,0,0,0.153606533256243,0.131886287730194,0,0,0,0,0,0,0,0,0.151452386666368,0,2.02905142091174,0.860423876981386,0,1.07940638327563,0,0,4.49422144421606,0,0,0,0,0,0,0,0,0,0,2.74041311325744,17.8667139716548,0.593768556259299,0.693941307064543,0.913396434936424,0.230615497256059,0.452167921657868,0.470354828542819,0,4.20231445148436,1.01219549843938,15.0383793831479,1.61766849947409,10.6003928860989,10.6672555689749,0,0,0,1.27728527604296,2.27648736561249,2.39961092397363,1.14363204365758,0,0,0,0.173824320192276,0,0,0,0.305518091550949,7.96204611904595,0.252722758433675,0.420883711772948,0.130120442962704,0,0.180062129805349,0.60281927134286,0.0680364991513279,0.12811372028485,0.0937017245597288,0,0.646703978798527,0,0,0,0,0.348252166522167,0,0,1.40442637462647,2.57347907114715,0.852490498186778,0.621377317606506,0.469052119962192,0.36012412292203,0.473489471170421,0.393528463494808,0.154267112887378,0.465067889500816,0,0.233530684734339,0,0.32833492815819,0.243206428637567,0.438599962275997,1.53685080703735,1.07365135008297,0,0,2.31293148088659,0.793351699990633,0,0,0.128867461322093,0.403367049246685,0,0.380451252225118,1.42358718463353,0.494096864172033,0.251335208800269,0.198956472041151,0.58489226135736,0,1.08069024937347,0.597423819763102,0.189667900953082,0.571242563048644,0,0.203651327845314,0,0.0701358198903186,0.189709611372772,0.295220295959204,0.31399745568275,0.370191491765402,0.889357881261447,11.5123122944105,13.9556886530374,12.367416181167,15.6202293469147,14.9529839046498,7.89340140522401,12.9463261852865,8.10676133875177,3.29473695825698,5.75072826109418,2.23284568601102,1.5601883655728,0.252578877947112,0.896987067609561,0.482443521363367,3.14080423283228,0.189491411770485,0.325929952884052,0,0.234690248288502,0.670025029767263,0.714130922658041,0.195133647857799,1.10344600874334,0.8858587585951,0.637819074629948,3.27726629431476,1.72684981865896,1.59113964439663,1.50791283939272,7.61467957346193,1.47529281905711,1.37968373152366,0,0,0,1.00988370881749,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0.534196811001766,0,0.329940245945071,0,0.242780636154981,0,0,0,0,0.258428293168221,0,0.356497378384721,0,0,0,0.340439605753788,0,0,0,0.177340233642274,0,0,0.304464949114599,0.469343416127421,0,0,0.49465875882444,0.645857706783622,0.0603129249281559,0.238744688006273,0.328281799490123,1.1659233465194,0,15.5492501526046,1.65109494370578,8.33375373163703,19.2135826144785,25.9719032669948,16.0144721244566,1.69978429993855,1.53946597556024,2.48759952847963,0,0.158167996790568,1.21991680276109,0.108005340821801,0.418176592028937,0.436725127492355,0.404593039154462,0.247960367176008,0,0.259229946583586,0,124.576139449206,0.149516546043979,0,0,0.129159823477731,0,0.704143431874524,0.13020438484395,0,14.4950472495604,38.0199608260382,44.5575680085731,0.608175645870493,2.56777392912068,4.67714962720062,9.13036147904155,21.0602236068141,16.7071674832757,17.131985152251,23.1213170381258,21.261699056745,29.0379413194101,35.7670422314891,28.0938577589762,34.4786861435628,0,0,0,0,0.386379188064381,0.375364950902364,0.73260649706906,0.214368379079066,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0.103787347584177,1.19707462020309,1.70733605754134,1.70174701947806,1.04806581313991,1.47074806760011,1.55572709461131,2.06035057238894,2.24643446714271,0.758091635291392,1.2673964994512,0.943131706930381,1.31098110457835,1.28050304809739,1.26358031702349,0.952587382566147,1.15884325944855,1.15745532278223,1.64834360321323,0.735994600671987,0.342869252385415,0.70990322463735,1.1921809497366,1.0174249164263,1.03520318456864,1.18460451048347,0.73171189149109,1.57841826862706,1.49384525230448,0.561142271657738,1.18635018124174,1.0835493061312,1.22769312950907,0.464810523557898,2.12197272079256,0.749431733813838,0,1.07435527024149,0.191288332068843,1.76473135295612,3.47801753430632 | |||
|short_description=p2@Atxn7l1 | |||
}} |
Revision as of 00:00, 5 August 2015
Short description: | p2@Atxn7l1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Atxn7l1_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | 0bp_to_ENSMUST00000145589, ENSMUST00000154742_5end |
EntrezGene: | 380753 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 1.35e-10 | 32 |
hematopoietic oligopotent progenitor cell | 1.35e-10 | 32 |
hematopoietic stem cell | 1.35e-10 | 32 |
hematopoietic multipotent progenitor cell | 1.35e-10 | 32 |
hematopoietic lineage restricted progenitor cell | 3.39e-10 | 25 |
connective tissue cell | 2.69e-07 | 46 |
mesenchymal cell | 2.69e-07 | 46 |
mature alpha-beta T cell | 8.52e-07 | 9 |
alpha-beta T cell | 8.52e-07 | 9 |
immature T cell | 8.52e-07 | 9 |
mature T cell | 8.52e-07 | 9 |
immature alpha-beta T cell | 8.52e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.05e-18 | 45 |
blood island | 2.05e-18 | 45 |
hemolymphoid system | 8.88e-18 | 48 |
immune system | 8.88e-18 | 48 |
hemopoietic organ | 4.41e-15 | 29 |
immune organ | 4.41e-15 | 29 |
mixed endoderm/mesoderm-derived structure | 8.70e-12 | 35 |
thymus | 4.88e-11 | 23 |
neck | 4.88e-11 | 23 |
respiratory system epithelium | 4.88e-11 | 23 |
hemolymphoid system gland | 4.88e-11 | 23 |
pharyngeal epithelium | 4.88e-11 | 23 |
thymic region | 4.88e-11 | 23 |
pharyngeal gland | 4.88e-11 | 23 |
entire pharyngeal arch endoderm | 4.88e-11 | 23 |
thymus primordium | 4.88e-11 | 23 |
early pharyngeal endoderm | 4.88e-11 | 23 |
pharynx | 2.86e-10 | 24 |
gland of gut | 2.86e-10 | 24 |
upper respiratory tract | 2.86e-10 | 24 |
chordate pharynx | 2.86e-10 | 24 |
pharyngeal arch system | 2.86e-10 | 24 |
pharyngeal region of foregut | 2.86e-10 | 24 |
gut epithelium | 8.13e-10 | 55 |
foregut | 3.09e-09 | 80 |
lateral plate mesoderm | 5.33e-09 | 87 |
unilaminar epithelium | 7.56e-09 | 66 |
endo-epithelium | 2.34e-08 | 69 |
segment of respiratory tract | 2.44e-08 | 27 |
connective tissue | 2.69e-07 | 46 |
endocrine gland | 4.63e-07 | 60 |