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FFCP PHASE1:Mm9::chr10:89149110..89149166,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=
|EntrezGene=
|HGNC=
|HGNC=
|MCL_coexpression_id=456
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=0bp_to_ENSMUST00000123742,uc007gsq.1,uc007gsr.1_5end
|association_with_transcript=0bp_to_ENSMUST00000123742,uc007gsq.1,uc007gsr.1_5end
|cluster_id=chr10:89149110..89149166,+
|description=CAGE_peak_1_at_ENSMUST00000123742_5end,CAGE_peak_1_at_uc007gsq.1_5end,CAGE_peak_1_at_uc007gsr.1_5end
|description=CAGE_peak_1_at_ENSMUST00000123742_5end,CAGE_peak_1_at_uc007gsq.1_5end,CAGE_peak_1_at_uc007gsr.1_5end
|id=chr10:89149110..89149166,+
|id=chr10:89149110..89149166,+
|ontology_enrichment_celltype=CL:0000117!1.77e-08!23;CL:0000337!1.77e-08!23
|ontology_enrichment_celltype_v019_2=CL:0000117,5.16e-09,23;CL:0000337,5.16e-09,23
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!3.03e-17!52;UBERON:0005068!3.03e-17!52;UBERON:0006241!3.03e-17!52;UBERON:0007135!3.03e-17!52;UBERON:0000033!1.36e-16!63;UBERON:0001017!2.21e-16!73;UBERON:0005743!2.21e-16!73;UBERON:0000955!3.65e-16!50;UBERON:0006238!3.65e-16!50;UBERON:0002616!1.59e-15!49;UBERON:0000073!7.92e-15!75;UBERON:0001016!7.92e-15!75;UBERON:0002346!4.16e-14!71;UBERON:0003075!4.16e-14!71;UBERON:0007284!4.16e-14!71;UBERON:0004121!1.71e-12!102;UBERON:0000924!1.71e-12!102;UBERON:0006601!1.71e-12!102;UBERON:0003080!1.82e-12!40;UBERON:0002020!2.66e-12!34;UBERON:0004111!2.77e-12!122;UBERON:0003056!4.20e-12!49;UBERON:0002780!5.25e-12!39;UBERON:0001890!5.25e-12!39;UBERON:0006240!5.25e-12!39;UBERON:0000025!1.25e-10!114;UBERON:0002791!8.83e-10!29;UBERON:0003528!8.83e-10!29;UBERON:0001893!8.83e-10!29;UBERON:0002021!9.23e-08!10;UBERON:0000411!9.23e-08!10;UBERON:0001950!9.23e-08!10;UBERON:0000956!5.90e-07!21;UBERON:0001869!5.90e-07!21;UBERON:0000203!5.90e-07!21
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.59e-19,54;UBERON:0001049,5.21e-18,52;UBERON:0005068,5.21e-18,52;UBERON:0006241,5.21e-18,52;UBERON:0007135,5.21e-18,52;UBERON:0001017,9.13e-18,73;UBERON:0001016,1.84e-16,75;UBERON:0002346,1.88e-16,64;UBERON:0003075,1.88e-16,64;UBERON:0007284,1.88e-16,64;UBERON:0000955,3.27e-15,47;UBERON:0006238,3.27e-15,47;UBERON:0004121,1.39e-14,95;UBERON:0000924,1.39e-14,95;UBERON:0006601,1.39e-14,95;UBERON:0002616,1.51e-14,46;UBERON:0010371,3.19e-14,73;UBERON:0002020,5.25e-13,34;UBERON:0003080,7.10e-13,40;UBERON:0002780,2.20e-12,39;UBERON:0001890,2.20e-12,39;UBERON:0006240,2.20e-12,39;UBERON:0004111,2.65e-12,122;UBERON:0003056,6.72e-12,49;UBERON:0010314,5.96e-11,92;UBERON:0000025,9.53e-11,114;UBERON:0003528,2.69e-10,29;UBERON:0002791,2.69e-10,29;UBERON:0001893,2.69e-10,29;UBERON:0002021,3.05e-08,10;UBERON:0000411,3.05e-08,10;UBERON:0001950,3.05e-08,10;UBERON:0000956,2.91e-07,21;UBERON:0001869,2.91e-07,21;UBERON:0000203,2.91e-07,21;UBERON:0000489,7.45e-07,21;UBERON:0011216,8.06e-07,194
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12515731,0.316011120628178,0.810900861160657,0.616265742988964,0.129920822977795,0.179026695667481,0.39736270956253,0.360586348559907,0.295379054349154,0.504832249740738,0.533447646584999,0.403304740547362,0.487289403698762,0.481059208201647,1.05189211963412,1.81384306892169,0.665957860122194,0.448569283047378,0.167884616364078,5.21611903886914,1.50145980360946,0.915758121336325,0.857473516316263,4.51414893631827,10.7302850097243,6.44455331110048,9.16632821503035,13.0608418581203,15.0718154349541,9.06472676867641,11.4753825039407,12.6089936902782,9.5159905886683,18.1216109113137,0.93408612825759,1.19707462020309,0.512200817262403,1.21553358534147,0.628839487883947,1.65459157605013,2.00022055021454,1.85431551515005,0.962757628775446,1.51618327058278,1.77435509923168,1.69763707247469,1.40462261204824,1.60062881012173,1.14870937911227,1.42888107384922,1.27472758539341,1.35036454324594,3.29668720642645,1.03039244094078,4.4573002810104,2.48466128623072,0.953744759789284,2.18019624948493,1.2234219453993,2.03075058940024,1.64635175585495,2.36762740294059,1.49384525230448,0,1.42362021749009,1.47756723563345,0,0.619747364743864,1.54325288784913,0.749431733813838,0.701794825336225,1.50409737833809,0,0.441182838239031,2.08681052058379
|phase1_expression=1.28119077683835,1.39590163055744,1.81999695755814,1.81478526784098,3.00537437967808,0.503637815735669,0.233612640595526,0.129123323441576,0.140788722151667,0,0.171217968225505,0,1.19840510951844,0.262261207256992,0,0.202475267389826,0,0.473193248037357,0,0,2.55129870453209,0.297872853602656,0,1.27993938234725,0.68822784320151,1.14846392823004,1.29228598847722,0.646413698057667,1.52018735565099,1.00812051903972,0,0,0,0,1.73310971850765,1.66234645358492,1.63335485009895,0.837063261473815,0,1.0470474879476,3.52938892818609,2.04913645487534,0.485510353031154,0.503587271902309,0.304130793658544,0,2.34717403304412,0.436050312760893,0.439372365468944,0.58328969722285,0.419959264876088,0,0,0.725362142011344,0.336093799142464,0.514518872071894,0.85960031981627,1.03134418455488,4.04632921719196,6.34789175126439,7.60597684207415,0,0,2.2497492932035,1.97773272513395,2.1314403448383,3.89480143673926,5.76327457982332,1.14058573539325,3.37514845829227,1.89292465216244,7.14127461009509,9.718215801871,1.22490799214954,1.34183659425531,3.67687514644008,8.8092704799511,4.72443150915195,6.14426133024974,3.03338461779446,2.19570344645783,2.08365348222704,6.14202597803038,11.2552522006336,4.88954392885792,6.18720029494702,5.55249555116501,6.71038004971082,0.151452386666368,0.0755715601067855,2.89864488701678,4.30211938490693,2.719885334831,7.01614149129162,8.4470934268197,6.72040330646003,2.24711072210803,1.02258193546835,1.29893002301434,1.06001872353102,2.53518155598025,3.84979432242953,0,0,0.649473123033642,0,0.505524445014783,4.90990682791958,0.517875767294343,1.33597925158342,0.346970653532272,0.913396434936424,0.922461989024234,1.50722640552623,0.940709657085638,1.0053327306374,0.247194967734374,4.62717942143717,0.884610551949874,0.485300549842228,0.662524555381181,1.93950101254089,1.86391761218122,7.61230072230023,7.33063473847093,1.27728527604296,0.239630249011841,0,0.127070227073065,5.99162557619291,6.8625090422794,3.14135880282161,9.56033761057521,4.85859368927628,8.3115217823824,4.38051410282946,0.916554274652847,1.11966273549084,2.77995034277042,7.36546495602659,0.650602214813519,0.689706313300419,0.900310649026746,1.50704817835715,1.2246569847239,2.17793324484245,1.87403449119458,6.72628763921441,0.215567992932842,0.189106080167819,1.40760899331159,1.09597866213787,1.94633074457919,1.0447564995665,0.61734640922383,0.796137067273973,0,0.51469581422943,0.568326998791185,0.207125772535502,0.234526059981096,0.720248245844059,0,0.590292695242212,0.308534225774757,1.62773761325285,1.60964040839772,1.05088808130453,1.15191894939436,2.46251196118643,2.26992666728396,3.07019973593198,3.07370161407471,1.61047702512446,7.78072809687271,2.6755199218614,0.991256348951394,2.3800550999719,1.2797295032114,0.464473343720877,0.902072229254653,1.4117846723634,1.11189021922435,1.14135375667535,1.42358718463353,0.988193728344065,1.75934646160189,1.1937388322469,1.55971269695296,1.79763881730844,2.16138049874694,1.99141273254367,0.189667900953082,2.05647322697512,1.1270773567308,4.48032921259691,4.65485969202302,3.0158402552837,3.79419222745544,9.88987991463334,15.3858753284547,14.0672766870853,8.00422093135302,0.83422552858047,0.393117990226406,0.449724224769707,0.811440485554012,0.964708639009667,1.2731292589071,2.30156909960649,1.62135226775035,1.92192989231657,1.43768206527355,1.48856379067401,5.61667811606209,3.78868316920668,2.51156378930677,3.85954817090694,1.66277871149944,0,0,0.339490171550376,0.469380496577004,0.167506257441816,0.952174563544055,0.390267295715598,0.630540576424764,1.32878813789265,1.11618338060241,1.63863314715738,1.03610989119537,1.73578870297814,1.50791283939272,0,3.44234991113325,3.31124095565679,7.38532713943843,6.09500770279457,0.327869890753351,4.29200576247434,2.2085575359138,0,1.50796378412959,1.19484398976276,1.11399337041197,0.283076530788832,1.21443210502468,0.584511715822624,0.395287777946524,10.9249247583414,0.851640511249612,0.890328018336276,1.46598263418218,1.15479086080775,1.32745138339963,0.485561272309963,1.209294227859,1.69744571780308,0.295301892880773,1.84461088766356,0.775284879504663,1.81766864738753,1.42598951353889,0.316036757935816,1.05418608574999,0,14.6389030474129,0.900305470156551,1.94038025674132,2.35770738534752,2.48276327099183,2.67553226403106,3.45552943264454,1.522324745573,0.704015124191131,1.27099242518292,2.64634077665954,0.49465875882444,0.484393280087717,0.482503399425247,0.358117032009409,0.656563598980245,1.45740418314925,8.15871328846243,0.341741761595705,0.82554747185289,0.740778109478847,1.13021074202815,0.546776910884101,0.686334519619568,0.169978429993855,0.279902904647316,0.138199973804424,4.77335309007557,0,1.62655573701479,1.40406943068342,0.836353184057875,2.62035076495413,1.07891477107857,1.40510874733071,1.57053565190418,3.24037433229482,7.45607175704311,1.12738587736838,0.598066184175915,0.165458490457098,0.777804753376191,0.904118764344118,0.844780627453891,0.469428954583016,0.911430693907651,0.104859344425711,1.44950472495604,0.576060012515731,0.316011120628178,0.810900861160657,0.616265742988964,0.129920822977795,0.179026695667481,0.39736270956253,0.360586348559907,0.295379054349154,0.504832249740738,0.533447646584999,0.403304740547362,0.487289403698762,0.481059208201647,1.05189211963412,1.81384306892169,0.665957860122194,0.448569283047378,0.167884616364078,5.21611903886914,1.50145980360946,0.915758121336325,0.857473516316263,4.51414893631827,10.7302850097243,6.44455331110048,9.16632821503035,13.0608418581203,15.0718154349541,9.06472676867641,11.4753825039407,12.6089936902782,9.5159905886683,18.1216109113137,0.93408612825759,1.19707462020309,0.512200817262403,1.21553358534147,0.628839487883947,1.65459157605013,2.00022055021454,1.85431551515005,0.962757628775446,1.51618327058278,1.77435509923168,1.69763707247469,1.40462261204824,1.60062881012173,1.14870937911227,1.42888107384922,1.27472758539341,1.35036454324594,3.29668720642645,1.03039244094078,4.4573002810104,2.48466128623072,0.953744759789284,2.18019624948493,1.2234219453993,2.03075058940024,1.64635175585495,2.36762740294059,1.49384525230448,0,1.42362021749009,1.47756723563345,0,0.619747364743864,1.54325288784913,0.749431733813838,0.701794825336225,1.50409737833809,0,0.441182838239031,2.08681052058379
|short_description=p1@ENSMUST00000123742,p1@uc007gsq.1,p1@uc007gsr.1
|short_description=p1@ENSMUST00000123742,p1@uc007gsq.1,p1@uc007gsr.1
}}
}}

Latest revision as of 00:24, 5 August 2015

Short description:p1@ENSMUST00000123742, p1@uc007gsq.1, p1@uc007gsr.1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_ENSMUST00000123742_5end, CAGE_peak_1_at_uc007gsq.1_5end, CAGE_peak_1_at_uc007gsr.1_5end
Coexpression cluster:MCL_coexpression_mm9:456
Association with transcript: 0bp_to_ENSMUST00000123742, uc007gsq.1, uc007gsr.1_5end
EntrezGene:NA
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@ENSMUST00000123742p1@uc007gsq.1p1@uc007gsr.1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.28
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.40
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.82
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.81
CD326+ enterocyte, pool2.CNhs13197.11849-124I43.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E41.20
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.26
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.47
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.55
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.30
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.28
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.69
GP2+ M cell, pool1.CNhs13228.11845-124H91.15
GP2+ M cell, pool2.CNhs13231.11846-124I11.29
GP2+ M cell, pool3.CNhs13240.11847-124I20.65
Ileum epithelium, pool1.CNhs13199.10252-104B91.52
Ileum epithelium, pool2.CNhs13232.10253-104C11.01
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.73
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.66
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.63
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.84
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G93.53
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H22.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.50
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.30
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B72.35
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.42
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.86
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C34.05
Mouse Granule cells, donor2.CNhs12357.11731-123E36.35
Mouse Granule cells, donor3.CNhs12108.11636-122C77.61
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C72.25
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.13
Mouse Microglia, donor1.CNhs12629.11718-123C83.89
Mouse Microglia, donor2.CNhs12634.11736-123E85.76
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.14
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F53.38
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.89
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F17.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D59.72
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.22
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.34
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D63.68
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D38.81
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.72
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D76.14
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.03
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.20
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.08
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E46.14
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E511.26
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I64.89
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D66.19
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F65.55
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E16.71
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.90
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F74.30
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.72
Mouse hepatocyte, donor3.CNhs12615.11637-122C87.02
Mouse hepatocyte, donor6.CNhs13090.11822-124F48.45
Mouse hepatocyte, donor8.CNhs13091.11824-124F66.72
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.25
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.02
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.30
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.06
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.54
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H13.85
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.65
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B64.91
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D71.34
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F51.51
adrenal gland, neonate N00.CNhs11191.1311-23C10.94
adrenal gland, neonate N25.CNhs11223.1377-27I31.01
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H14.63
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A60.66
bone (os femoris), neonate N20.CNhs11195.1350-25C31.94
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B27.61
cerebellum, neonate N30.CNhs11135.1395-42I27.33
colon, adult.CNhs10468.36-18H71.28
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.24
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A45.99
corpus striatum, adult.CNhs10487.19-21D86.86
corpus striatum, neonate N00.CNhs11226.630-43F13.14
cortex, adult.CNhs10473.12-14D59.56
cortex, neonate N30.CNhs11107.1392-42F24.86
diencephalon, adult.CNhs10482.20-12F28.31
diencephalon, neonate N30.CNhs11201.1388-42B24.38
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.92
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.12
epididymis, adult.CNhs10490.58-23B22.78
eyeball, adult.CNhs10484.31-12G47.37
eyeball, embryo E12.CNhs11016.345-16C60.65
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C90.90
eyeball, embryo E17.CNhs11023.1261-18D41.51
eyeball, neonate N00.CNhs11207.633-15C61.22
eyeball, neonate N01.CNhs11140.1532-43E72.18
eyeball, neonate N02.CNhs11205.1551-44G81.87
eyeball, neonate N16.CNhs11188.777-19A26.73
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E21.41
forelimb, embryo E14.CNhs10577.413-26A81.10
forelimb, embryo E15.CNhs11007.437-20E71.95
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I60.80
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.51
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.57
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.72
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.59
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E51.63
heart, embryo E18.CNhs11030.1283-20G31.61
heart, neonate N00.CNhs11213.639-21E31.05
heart, neonate N03.CNhs11221.1349-25I21.15
heart, neonate N10.CNhs11118.749-24G12.46
heart, neonate N16.CNhs11209.782-15G12.27
heart, neonate N20.CNhs11127.821-26I63.07
heart, neonate N25.CNhs11196.1351-25D33.07
heart, neonate N30.CNhs11202.1390-42D21.61
hippocampus, adult.CNhs10478.13-16E87.78
hippocampus, neonate N00.CNhs11228.627-43G12.68
intestinal mucosa, adult.CNhs10506.860-29I30.99
intestine, adult.CNhs10496.178-9A32.38
intestine, embryo E12.CNhs11019.1251-16I51.28
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.90
intestine, embryo E16.CNhs10585.463-22H41.41
intestine, embryo E17.CNhs10582.482-18D31.11
intestine, embryo E18.CNhs10526.1289-20F71.14
intestine, neonate N00.CNhs11126.644-26D11.42
intestine, neonate N01.CNhs11192.1322-23E90.99
intestine, neonate N06.CNhs11102.688-20B81.76
intestine, neonate N07.CNhs11095.720-20F21.19
intestine, neonate N10.CNhs11098.755-23A51.56
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E32.16
intestine, neonate N30.CNhs11131.1384-42G11.99
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F82.06
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I24.48
kidney, embryo E18.CNhs11001.1288-20C74.65
kidney, neonate N00.CNhs11214.646-21G73.02
kidney, neonate N10.CNhs11206.758-6D53.79
kidney, neonate N20.CNhs11113.832-19I19.89
kidney, neonate N25.CNhs11122.1353-25F315.39
kidney, neonate N30.CNhs11203.1385-42H114.07
liver, adult pregnant day01.CNhs10466.508-5B28.00
liver, embryo E12.CNhs10601.355-15F80.83
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D70.81
liver, embryo E16.CNhs10523.462-17F50.96
liver, embryo E17.CNhs10510.481-18A31.27
liver, embryo E18.CNhs10579.499-43G42.30
liver, neonate N00.CNhs11117.641-24F41.62
liver, neonate N03.CNhs11123.1345-25G21.92
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H21.49
liver, neonate N10.CNhs11115.751-24B95.62
liver, neonate N20.CNhs11220.823-25A33.79
liver, neonate N25.CNhs11198.1368-26H12.51
liver, neonate N30.CNhs11106.1382-42D13.86
lung, adult.CNhs10474.28-22B11.66
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.95
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.63
lung, neonate N07.CNhs11111.715-19A31.33
lung, neonate N10.CNhs11219.750-23E61.12
lung, neonate N20.CNhs11109.822-18A41.64
lung, neonate N25.CNhs11119.1359-25C71.04
lung, neonate N30.CNhs11133.1394-42H21.74
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B63.44
mammary gland, adult pregnant day19.CNhs10476.588-5H23.31
medulla oblongata, adult.CNhs10477.17-12C27.39
medulla oblongata, neonate N30.CNhs11200.1396-42A36.10
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.33
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C24.29
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.21
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.51
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.19
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.11
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.21
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I910.92
ovary, adult.CNhs10507.91-2I70.85
ovary, embryo E18.CNhs11040.505-44H70.89
ovary, neonate N00.CNhs11217.1299-22I41.47
oviduct, adult pregnant day01.CNhs10500.988-6G61.15
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F21.21
pancreas, embryo E16.CNhs11003.460-26E51.70
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I71.84
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D71.82
pancreas, neonate N02.CNhs11139.1539-43D81.43
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G814.64
pituitary gland, embryo E12.CNhs11018.346-16E60.90
pituitary gland, embryo E13.CNhs11009.370-44C71.94
pituitary gland, embryo E14.CNhs11037.398-44A52.36
pituitary gland, embryo E15.CNhs10592.427-16B92.48
pituitary gland, embryo E16.CNhs11036.449-43F62.68
pituitary gland, embryo E17.CNhs11039.1265-44F53.46
pituitary gland, neonate N00.CNhs11190.1308-22E91.52
placenta, adult pregnant day10.CNhs10472.539-13I70.70
placenta, adult pregnant day17.CNhs10464.577-18G31.27
prostate, adult.CNhs10470.859-1F82.65
skin, adult.CNhs10492.30-1C30.49
skin, neonate N00.CNhs11124.650-25G40.48
skin, neonate N03.CNhs11215.662-22H30.48
skin, neonate N06.CNhs11097.693-20I50.36
skin, neonate N10.CNhs11108.762-6C40.66
small intestine, neonate N16.CNhs11114.790-21I11.46
spinal cord, adult.CNhs10505.24-13C98.16
spleen, adult.CNhs10465.25-2G20.34
spleen, embryo E16.CNhs11035.461-43C10.83
spleen, embryo E18.CNhs11011.1271-21F20.74
spleen, neonate N10.CNhs11116.752-24D11.13
spleen, neonate N20.CNhs11112.824-19H10.55
spleen, neonate N25.CNhs11099.1354-25G30.69
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H64.77
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G81.63
stomach, embryo E16.CNhs11022.459-17D41.40
stomach, embryo E17.CNhs11006.1035-18D50.84
stomach, embryo E18.CNhs10999.1286-20C62.62
stomach, neonate N03.CNhs11193.1340-24B81.08
stomach, neonate N07.CNhs11210.718-18A91.41
stomach, neonate N25.CNhs11104.1355-25E41.57
stomach, neonate N30.CNhs11134.1386-42I13.24
submandibular gland, adult.CNhs10469.59-29C17.46
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F50.60
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.78
testis, embryo E17.CNhs11029.486-18I50.90
testis, embryo E18.CNhs11027.503-18G50.84
testis, neonate N00.CNhs11189.1300-22B70.47
testis, neonate N07.CNhs11222.726-26I40.91
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H31.45
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.81
thymus, embryo E15.CNhs11005.430-45I20.62
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.36
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.50
thymus, neonate N07.CNhs11211.713-19D30.53
thymus, neonate N10.CNhs11194.748-24E40.40
thymus, neonate N20.CNhs11186.820-7A20.49
thymus, neonate N25.CNhs11125.1362-25G70.48
thymus, neonate N30.CNhs11132.1393-42G21.05
tongue, adult.CNhs10499.32-1B41.81
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.67
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.45
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E45.22
uterus, adult pregnant day19.CNhs10497.590-15F51.50
uterus, adult.CNhs10509.92-27E50.92
vagina, adult.CNhs10502.89-27D50.86
vesicular gland, adult.CNhs10491.51-27F84.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A110.73
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A26.44
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A39.17
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D713.06
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A415.07
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A59.06
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A611.48
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A712.61
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A89.52
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A918.12
whole body, embryo E11.CNhs11014.324-5I80.93
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D21.22
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F21.65
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.85
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.70
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.40
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.15
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.35
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G54.46
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.48
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.18
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.03
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.37
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.49
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.42
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.48
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F91.54
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C21.50
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B42.09





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)5.16e-0923
neuroblast (sensu Vertebrata)5.16e-0923

Uber anatomy
Ontology termp-valuen
regional part of nervous system4.59e-1954
neural tube5.21e-1852
neural rod5.21e-1852
future spinal cord5.21e-1852
neural keel5.21e-1852
central nervous system9.13e-1873
nervous system1.84e-1675
neurectoderm1.88e-1664
neural plate1.88e-1664
presumptive neural plate1.88e-1664
brain3.27e-1547
future brain3.27e-1547
ectoderm-derived structure1.39e-1495
ectoderm1.39e-1495
presumptive ectoderm1.39e-1495
regional part of brain1.51e-1446
ecto-epithelium3.19e-1473
gray matter5.25e-1334
anterior neural tube7.10e-1340
regional part of forebrain2.20e-1239
forebrain2.20e-1239
future forebrain2.20e-1239
anatomical conduit2.65e-12122
pre-chordal neural plate6.72e-1249
structure with developmental contribution from neural crest5.96e-1192
tube9.53e-11114
brain grey matter2.69e-1029
regional part of telencephalon2.69e-1029
telencephalon2.69e-1029
occipital lobe3.05e-0810
visual cortex3.05e-0810
neocortex3.05e-0810
cerebral cortex2.91e-0721
cerebral hemisphere2.91e-0721
pallium2.91e-0721
cavitated compound organ7.45e-0721
organ system subdivision8.06e-07194
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