FFCP PHASE1:Mm9::chr7:31203177..31203188,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=260|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr7:31203177..31203188,+|id=chr7:31203177..31203188,+|ontology_enrichment_celltype=CL:0000988!3.66e-17!32;CL:0002032!3.66e-17!32;CL:0000037!3.66e-17!32;CL:0000566!3.66e-17!32;CL:0000837!3.66e-17!32;CL:0000893!1.99e-13!6;CL:0002489!1.99e-13!6;CL:0000898!1.99e-13!6;CL:0000809!1.99e-13!6;CL:0000810!1.99e-13!6;CL:0000895!1.99e-13!6;CL:0000808!1.99e-13!6;CL:0000894!1.99e-13!6;CL:0000806!1.99e-13!6;CL:0000807!1.99e-13!6;CL:0000805!1.99e-13!6;CL:0002425!1.99e-13!6;CL:0002436!1.99e-13!6;CL:0002427!1.99e-13!6;CL:0002428!1.99e-13!6;CL:0002429!1.99e-13!6;CL:0002433!1.99e-13!6;CL:0002431!1.99e-13!6;CL:0002432!1.99e-13!6;CL:0000791!1.35e-12!9;CL:0000789!1.35e-12!9;CL:0002420!1.35e-12!9;CL:0002419!1.35e-12!9;CL:0000790!1.35e-12!9;CL:0000838!1.65e-12!12;CL:0000542!1.78e-11!13;CL:0000051!1.78e-11!13;CL:0002320!4.37e-11!46;CL:0000134!4.37e-11!46;CL:0000084!3.39e-10!11;CL:0000827!3.39e-10!11;CL:0000624!5.25e-10!8;CL:0000034!1.58e-09!97;CL:0000219!4.95e-09!54;CL:0000738!1.47e-08!17;CL:0002087!1.47e-08!17;CL:0000049!1.61e-07!19;CL:0002031!3.77e-07!25;CL:0000723!4.72e-07!91;CL:0000048!4.72e-07!91;CL:0000063!6.82e-07!66;CL:0000144!7.72e-07!121;CL:0000012!7.72e-07!121|ontology_enrichment_celltype_v019_2=CL:0000355,2.23e-10,9;CL:0000893,1.76e-07,6;CL:0002489,1.76e-07,6;CL:0000898,1.76e-07,6;CL:0000809,1.76e-07,6;CL:0000810,1.76e-07,6;CL:0000895,1.76e-07,6;CL:0000808,1.76e-07,6;CL:0000894,1.76e-07,6;CL:0000806,1.76e-07,6;CL:0000807,1.76e-07,6;CL:0000805,1.76e-07,6;CL:0002425,1.76e-07,6;CL:0002436,1.76e-07,6;CL:0002427,1.76e-07,6;CL:0002428,1.76e-07,6;CL:0002429,1.76e-07,6;CL:0002433,1.76e-07,6;CL:0002431,1.76e-07,6;CL:0002432,1.76e-07,6|ontology_enrichment_disease=DOID:0060100!3.07e-11!3;DOID:4045!3.07e-11!3|ontology_enrichment_disease_v019_2=DOID:0060100,1.12e-29,3;DOID:4045,1.12e-29,3;DOID:0050686,3.13e-15,6|ontology_enrichment_uberon=UBERON:0002384!4.37e-11!46|ontology_enrichment_uberon_v019_2=UBERON:0001134,2.23e-10,9;UBERON:0002036,2.23e-10,9;UBERON:0002385,2.23e-10,9;UBERON:0000486,2.23e-10,9;UBERON:0007503,2.23e-10,9;UBERON:0001015,2.23e-10,9;UBERON:0002329,2.23e-10,9;UBERON:0003082,2.23e-10,9;UBERON:0003059,2.23e-10,9;UBERON:0007282,2.23e-10,9;UBERON:0004290,2.23e-10,9;UBERON:0009618,2.23e-10,9;UBERON:0000383,2.11e-09,10;UBERON:0007524,1.33e-08,11;UBERON:0003077,1.33e-08,11;UBERON:0007285,1.33e-08,11|phase1_expression=0,0,0,0,0,0,0,0,10.8407316056783,3.27690336850791,0.34243593645101,0,0.171200729931206,0.174840804837995,0,0,0,0,0.274228867211478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.37063261473815,2.3440060335714,6.28228492768558,14.1175557127443,8.19654581950135,5.34061388334269,0,0,0,0,0,0,0,0,0,0.335565212115473,0,0.672187598284928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239630249011841,0.599902730993408,0.254140454146129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702213187313235,1.02939162845886,0.568326998791185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161464426695906,0,0,0,0,0,0,0.206386867963223,0,0,0,0,0.169978429993855,0.279902904647316,0.276399947608848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr7:31203177..31203188,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=260 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr7:31203177..31203188,+ | |||
|description=CAGE_peak_at_chr7:31203177..31203188,+ | |||
|id=chr7:31203177..31203188,+ | |||
|ontology_enrichment_celltype=CL:0000988!3.66e-17!32;CL:0002032!3.66e-17!32;CL:0000037!3.66e-17!32;CL:0000566!3.66e-17!32;CL:0000837!3.66e-17!32;CL:0000893!1.99e-13!6;CL:0002489!1.99e-13!6;CL:0000898!1.99e-13!6;CL:0000809!1.99e-13!6;CL:0000810!1.99e-13!6;CL:0000895!1.99e-13!6;CL:0000808!1.99e-13!6;CL:0000894!1.99e-13!6;CL:0000806!1.99e-13!6;CL:0000807!1.99e-13!6;CL:0000805!1.99e-13!6;CL:0002425!1.99e-13!6;CL:0002436!1.99e-13!6;CL:0002427!1.99e-13!6;CL:0002428!1.99e-13!6;CL:0002429!1.99e-13!6;CL:0002433!1.99e-13!6;CL:0002431!1.99e-13!6;CL:0002432!1.99e-13!6;CL:0000791!1.35e-12!9;CL:0000789!1.35e-12!9;CL:0002420!1.35e-12!9;CL:0002419!1.35e-12!9;CL:0000790!1.35e-12!9;CL:0000838!1.65e-12!12;CL:0000542!1.78e-11!13;CL:0000051!1.78e-11!13;CL:0002320!4.37e-11!46;CL:0000134!4.37e-11!46;CL:0000084!3.39e-10!11;CL:0000827!3.39e-10!11;CL:0000624!5.25e-10!8;CL:0000034!1.58e-09!97;CL:0000219!4.95e-09!54;CL:0000738!1.47e-08!17;CL:0002087!1.47e-08!17;CL:0000049!1.61e-07!19;CL:0002031!3.77e-07!25;CL:0000723!4.72e-07!91;CL:0000048!4.72e-07!91;CL:0000063!6.82e-07!66;CL:0000144!7.72e-07!121;CL:0000012!7.72e-07!121 | |||
|ontology_enrichment_celltype_v019_2=CL:0000355,2.23e-10,9;CL:0000893,1.76e-07,6;CL:0002489,1.76e-07,6;CL:0000898,1.76e-07,6;CL:0000809,1.76e-07,6;CL:0000810,1.76e-07,6;CL:0000895,1.76e-07,6;CL:0000808,1.76e-07,6;CL:0000894,1.76e-07,6;CL:0000806,1.76e-07,6;CL:0000807,1.76e-07,6;CL:0000805,1.76e-07,6;CL:0002425,1.76e-07,6;CL:0002436,1.76e-07,6;CL:0002427,1.76e-07,6;CL:0002428,1.76e-07,6;CL:0002429,1.76e-07,6;CL:0002433,1.76e-07,6;CL:0002431,1.76e-07,6;CL:0002432,1.76e-07,6 | |||
|ontology_enrichment_disease=DOID:0060100!3.07e-11!3;DOID:4045!3.07e-11!3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,1.12e-29,3;DOID:4045,1.12e-29,3;DOID:0050686,3.13e-15,6 | |||
|ontology_enrichment_uberon=UBERON:0002384!4.37e-11!46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,2.23e-10,9;UBERON:0002036,2.23e-10,9;UBERON:0002385,2.23e-10,9;UBERON:0000486,2.23e-10,9;UBERON:0007503,2.23e-10,9;UBERON:0001015,2.23e-10,9;UBERON:0002329,2.23e-10,9;UBERON:0003082,2.23e-10,9;UBERON:0003059,2.23e-10,9;UBERON:0007282,2.23e-10,9;UBERON:0004290,2.23e-10,9;UBERON:0009618,2.23e-10,9;UBERON:0000383,2.11e-09,10;UBERON:0007524,1.33e-08,11;UBERON:0003077,1.33e-08,11;UBERON:0007285,1.33e-08,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,10.8407316056783,3.27690336850791,0.34243593645101,0,0.171200729931206,0.174840804837995,0,0,0,0,0.274228867211478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.37063261473815,2.3440060335714,6.28228492768558,14.1175557127443,8.19654581950135,5.34061388334269,0,0,0,0,0,0,0,0,0,0.335565212115473,0,0.672187598284928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239630249011841,0.599902730993408,0.254140454146129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702213187313235,1.02939162845886,0.568326998791185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161464426695906,0,0,0,0,0,0,0.206386867963223,0,0,0,0,0.169978429993855,0.279902904647316,0.276399947608848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr7:31203177..31203188,+ | |||
}} |
Latest revision as of 00:51, 5 August 2015
Short description: | p@chr7:31203177..31203188, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:31203177..31203188, + |
Coexpression cluster: | MCL_coexpression_mm9:260 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi-potent skeletal muscle stem cell | 2.23e-10 | 9 |
thymocyte | 1.76e-07 | 6 |
double negative thymocyte | 1.76e-07 | 6 |
naive T cell | 1.76e-07 | 6 |
double-positive, alpha-beta thymocyte | 1.76e-07 | 6 |
CD4-positive, alpha-beta thymocyte | 1.76e-07 | 6 |
naive thymus-derived CD4-positive, alpha-beta T cell | 1.76e-07 | 6 |
DN4 thymocyte | 1.76e-07 | 6 |
DN1 thymic pro-T cell | 1.76e-07 | 6 |
DN2 thymocyte | 1.76e-07 | 6 |
DN3 thymocyte | 1.76e-07 | 6 |
immature single positive thymocyte | 1.76e-07 | 6 |
early T lineage precursor | 1.76e-07 | 6 |
mature CD4 single-positive thymocyte | 1.76e-07 | 6 |
resting double-positive thymocyte | 1.76e-07 | 6 |
double-positive blast | 1.76e-07 | 6 |
CD69-positive double-positive thymocyte | 1.76e-07 | 6 |
CD69-positive, CD4-positive single-positive thymocyte | 1.76e-07 | 6 |
CD4-positive, CD8-intermediate double-positive thymocyte | 1.76e-07 | 6 |
CD24-positive, CD4 single-positive thymocyte | 1.76e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 2.23e-10 | 9 |
striated muscle tissue | 2.23e-10 | 9 |
muscle tissue | 2.23e-10 | 9 |
multilaminar epithelium | 2.23e-10 | 9 |
epithelial vesicle | 2.23e-10 | 9 |
musculature | 2.23e-10 | 9 |
somite | 2.23e-10 | 9 |
myotome | 2.23e-10 | 9 |
presomitic mesoderm | 2.23e-10 | 9 |
presumptive segmental plate | 2.23e-10 | 9 |
dermomyotome | 2.23e-10 | 9 |
trunk paraxial mesoderm | 2.23e-10 | 9 |
musculature of body | 2.11e-09 | 10 |
dense mesenchyme tissue | 1.33e-08 | 11 |
paraxial mesoderm | 1.33e-08 | 11 |
presumptive paraxial mesoderm | 1.33e-08 | 11 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 1.12e-29 | 3 |
muscle cancer | 1.12e-29 | 3 |
organ system cancer | 3.13e-15 | 6 |