Personal tools

FFCP PHASE1:Mm9::chr4:140258131..140258153,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(4 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=NA
|EntrezGene=NA
|HGNC=
|HGNC=
|MCL_coexpression_id=925
|TSSclassifier=NA
|UniProt=NA
|UniProt=NA
|association_with_transcript=NA
|association_with_transcript=NA
|cluster_id=chr4:140258131..140258153,+
|description=CAGE_peak_at_chr4:140258131..140258153,+
|description=CAGE_peak_at_chr4:140258131..140258153,+
|id=chr4:140258131..140258153,+
|id=chr4:140258131..140258153,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000988,1.55e-13,32;CL:0002032,1.55e-13,32;CL:0000037,1.55e-13,32;CL:0000837,1.55e-13,32;CL:0002031,1.46e-11,25;CL:0002320,3.55e-11,46;CL:0000134,3.55e-11,46;CL:0000738,1.70e-10,17;CL:0002087,1.70e-10,17;CL:0000219,3.48e-10,54;CL:0000791,6.68e-10,9;CL:0000789,6.68e-10,9;CL:0002420,6.68e-10,9;CL:0002419,6.68e-10,9;CL:0000790,6.68e-10,9;CL:0000838,1.02e-09,12;CL:0000542,7.09e-09,13;CL:0000051,7.09e-09,13;CL:0000624,4.56e-08,8;CL:0000084,6.04e-08,11;CL:0000827,6.04e-08,11;CL:0000893,2.55e-07,6;CL:0002489,2.55e-07,6;CL:0000898,2.55e-07,6;CL:0000809,2.55e-07,6;CL:0000810,2.55e-07,6;CL:0000895,2.55e-07,6;CL:0000808,2.55e-07,6;CL:0000894,2.55e-07,6;CL:0000806,2.55e-07,6;CL:0000807,2.55e-07,6;CL:0000805,2.55e-07,6;CL:0002425,2.55e-07,6;CL:0002436,2.55e-07,6;CL:0002427,2.55e-07,6;CL:0002428,2.55e-07,6;CL:0002429,2.55e-07,6;CL:0002433,2.55e-07,6;CL:0002431,2.55e-07,6;CL:0002432,2.55e-07,6
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=
|ontology_enrichment_uberon_v019_2=UBERON:0002384,3.55e-11,46;UBERON:0002021,1.10e-07,10;UBERON:0000411,1.10e-07,10;UBERON:0001950,1.10e-07,10
|phase1_expression=0.320297694209588,0.348975407639361,0.454999239389536,0,0,0.33575854382378,0.700837921786577,0.645616617207881,8.869689495555,9.12851652655775,4.96532107853964,2.71225340584144,0.684802919724823,0.699363219351979,0,0,1.39912375625629,0.473193248037357,1.09691546884591,0.42438965179803,1.19060606211498,0.198581902401771,0,0.159992422793407,0,0.57423196411502,0.430761996159075,0,0,0.252030129759931,0,1.90509202037889,0,0,0,0.498703936075477,0,0,0.7813353445238,0,0,0.683045484958446,0,0.125896817975577,0.202753862439029,0.183546752161682,0.782391344348039,0.218025156380447,0.219686182734472,0.777719596297134,0.419959264876088,1.43752564364972,2.51673909086605,2.17608642603403,2.01656279485478,0.514518872071894,1.14613375975503,0.515672092277442,0,0.528990979272033,0,0.338844532069132,1.77858959222228,0,0,2.1314403448383,0.898800331555214,1.53687322128622,0,0.135005938331691,0.210324961351382,0,0.662605622854841,0.122490799214954,0,0,0,0.510749352340751,0,0,0.365950574409639,0.52091337055676,0,0,0.30559649555362,0.883885756421003,0.284743361598206,0.372798891650601,0.984440513331393,0.68014404096107,0.869593466105033,0,0,0,0,0,0.421333260395256,0.511290967734173,0.519572009205738,0.35333957451034,0.845060518660083,0,0,14.2213340630666,0,0,0,0.22836775943812,0,0.148442139064825,0.173485326766136,0.304465478312141,0,0,0.117588707135705,0,0,0.144599356919912,0,0.647067399789637,1.10420759230197,0.484875253135222,0,0,0,0,1.1981512450592,0,0.635351135365324,0.149790639404823,0.457500602818626,0.125654352112864,0.695297280769106,0.255715457330331,0,0.973447578406546,0.611036183101898,0.124406970610093,0.505445516867349,0,0.260240885925407,0.459804208866946,0.180062129805349,0.452114453507145,0.0680364991513279,0.12811372028485,0.0937017245597288,0,0.431135985865684,0.189106080167819,0.175951124163949,0.219195732427575,0,0,0.205782136407943,0.398068533636986,2.1066395619397,1.28673953557358,0.852490498186778,0.207125772535502,0.234526059981096,0.180062061461015,0,0,0,0,0,0.116765342367169,0.493679549740441,0.32833492815819,0.324275238183423,0,0,0.134206418760372,0.210289948564127,0.205809224758569,0,0,0.213288250535234,0.928946687441754,0.38660238396628,0.201683524623343,0,0,0,0.329397909448022,0.251335208800269,0,0.38992817423824,0,0,0.398282546508734,0.379335801906163,0.342745537829186,1.1270773567308,0,0.581857461502877,0.0701358198903186,0.252946148497029,0,0.470996183524124,0,0.296452627087149,0.83422552858047,0.393117990226406,1.12431056192427,0,0.482354319504834,0.25462585178142,0,0.486405680325106,1.09824565275233,1.43768206527355,0,0,0.252578877947112,0,0.482443521363367,0.184753190166605,0.37898282354097,0.325929952884052,0.509235257325564,0,1.00503754465089,0.238043640886014,0.585400943573396,0,0,0.159454768657487,0.163863314715738,0,0.433947175744535,1.50791283939272,0,0.491764273019036,0.275936746304732,0,0.35163505977661,0.327869890753351,0.757412781613119,0,0,0.430846795465598,0.955875191810208,0.668396022247182,0.849229592366497,0,0.584511715822624,0.790575555893047,0.963963949265421,0.283880170416537,0.178065603667255,0.325773918707152,0,0,0.242780636154981,0.302323556964751,0,0,0,0.516856586336442,0.363533729477506,0.356497378384721,0,1.05418608574999,0,0,0.36012218806262,0.776152102696527,0.857348140126369,0.532020700926821,0.178368817602071,0.493647061806363,0,0,0,0.220528398054962,0.16488625294148,0.161464426695906,0.422190474497091,0.238744688006273,0.328281799490123,0,0,0.341741761595705,0.206386867963223,0.185194527369712,0.376736914009382,0.27338845544205,0.228778173206523,2.37969801991397,1.39951452323658,3.17859939750175,0,0.158167996790568,0.203319467126849,0.216010681643603,0,0,0.269728692769641,0.0826534557253359,0,0,0,2.81846469342095,0.299033092087958,0.330916980914195,0.194451188344048,0,0.168956125490778,0.704143431874524,0.2604087696879,0.209718688851422,0.483168241652012,2.59227005632079,0.316011120628178,0.202725215290164,0.308132871494482,0.129920822977795,0.179026695667481,0.596044064343795,0.841368146639782,0.295379054349154,1.00966449948148,0.685861259894999,0.302478555410522,0.292373642219257,0.865906574762965,0.584384510907845,0,0.221985953374065,0,0.167884616364078,0,0,0.36630324853453,0.214368379079066,0,1.12950368523413,1.38097570952153,0,1.20297227640581,0.685082519770642,0,2.02506750069542,0.45032120322422,2.26571204492102,1.55328093525546,0,0,0,0.486213434136588,0.628839487883947,0.919217542250071,0,0,0,0,0.25347929989024,0.188626341386076,0.0936415074698824,0.320125762024346,0.229741875822453,0,0.115884325944855,0.38581844092741,0,0.147198920134397,0,0.177475806159338,0.238436189947321,0.145346416632329,0.282328141245992,0.25384382367503,0,0,0.135804113845862,0,0,0.197008964751127,0,0.309873682371932,0.385813221962283,0.249810577937946,0,0.214871054048298,0.382576664137687,0.441182838239031,0
|phase1_expression=0.320297694209588,0.348975407639361,0.454999239389536,0,0,0.33575854382378,0.700837921786577,0.645616617207881,8.869689495555,9.12851652655775,4.96532107853964,2.71225340584144,0.684802919724823,0.699363219351979,0,0,1.39912375625629,0.473193248037357,1.09691546884591,0.42438965179803,1.19060606211498,0.198581902401771,0,0.159992422793407,0,0.57423196411502,0.430761996159075,0,0,0.252030129759931,0,1.90509202037889,0,0,0,0.498703936075477,0,0,0.7813353445238,0,0,0.683045484958446,0,0.125896817975577,0.202753862439029,0.183546752161682,0.782391344348039,0.218025156380447,0.219686182734472,0.777719596297134,0.419959264876088,1.43752564364972,2.51673909086605,2.17608642603403,2.01656279485478,0.514518872071894,1.14613375975503,0.515672092277442,0,0.528990979272033,0,0.338844532069132,1.77858959222228,0,0,2.1314403448383,0.898800331555214,1.53687322128622,0,0.135005938331691,0.210324961351382,0,0.662605622854841,0.122490799214954,0,0,0,0.510749352340751,0,0,0.365950574409639,0.52091337055676,0,0,0.30559649555362,0.883885756421003,0.284743361598206,0.372798891650601,0.984440513331393,0.68014404096107,0.869593466105033,0,0,0,0,0,0.421333260395256,0.511290967734173,0.519572009205738,0.35333957451034,0.845060518660083,0,0,14.2213340630666,0,0,0,0.22836775943812,0,0.148442139064825,0.173485326766136,0.304465478312141,0,0,0.117588707135705,0,0,0.144599356919912,0,0.647067399789637,1.10420759230197,0.484875253135222,0,0,0,0,1.1981512450592,0,0.635351135365324,0.149790639404823,0.457500602818626,0.125654352112864,0.695297280769106,0.255715457330331,0,0.973447578406546,0.611036183101898,0.124406970610093,0.505445516867349,0,0.260240885925407,0.459804208866946,0.180062129805349,0.452114453507145,0.0680364991513279,0.12811372028485,0.0937017245597288,0,0.431135985865684,0.189106080167819,0.175951124163949,0.219195732427575,0,0,0.205782136407943,0.398068533636986,2.1066395619397,1.28673953557358,0.852490498186778,0.207125772535502,0.234526059981096,0.180062061461015,0,0,0,0,0,0.116765342367169,0.493679549740441,0.32833492815819,0.324275238183423,0,0,0.134206418760372,0.210289948564127,0.205809224758569,0,0,0.213288250535234,0.928946687441754,0.38660238396628,0.201683524623343,0,0,0,0.329397909448022,0.251335208800269,0,0.38992817423824,0,0,0.398282546508734,0.379335801906163,0.342745537829186,1.1270773567308,0,0.581857461502877,0.0701358198903186,0.252946148497029,0,0.470996183524124,0,0.296452627087149,0.83422552858047,0.393117990226406,1.12431056192427,0,0.482354319504834,0.25462585178142,0,0.486405680325106,1.09824565275233,1.43768206527355,0,0,0.252578877947112,0,0.482443521363367,0.184753190166605,0.37898282354097,0.325929952884052,0.509235257325564,0,1.00503754465089,0.238043640886014,0.585400943573396,0,0,0.159454768657487,0.163863314715738,0,0.433947175744535,1.50791283939272,0,0.491764273019036,0.275936746304732,0,0.35163505977661,0.327869890753351,0.757412781613119,0,0,0.430846795465598,0.955875191810208,0.668396022247182,0.849229592366497,0,0.584511715822624,0.790575555893047,0.963963949265421,0.283880170416537,0.178065603667255,0.325773918707152,0,0,0.242780636154981,0.302323556964751,0,0,0,0.516856586336442,0.363533729477506,0.356497378384721,0,1.05418608574999,0,0,0.36012218806262,0.776152102696527,0.857348140126369,0.532020700926821,0.178368817602071,0.493647061806363,0,0,0,0.220528398054962,0.16488625294148,0.161464426695906,0.422190474497091,0.238744688006273,0.328281799490123,0,0,0.341741761595705,0.206386867963223,0.185194527369712,0.376736914009382,0.27338845544205,0.228778173206523,2.37969801991397,1.39951452323658,3.17859939750175,0,0.158167996790568,0.203319467126849,0.216010681643603,0,0,0.269728692769641,0.0826534557253359,0,0,0,2.81846469342095,0.299033092087958,0.330916980914195,0.194451188344048,0,0.168956125490778,0.704143431874524,0.2604087696879,0.209718688851422,0.483168241652012,2.59227005632079,0.316011120628178,0.202725215290164,0.308132871494482,0.129920822977795,0.179026695667481,0.596044064343795,0.841368146639782,0.295379054349154,1.00966449948148,0.685861259894999,0.302478555410522,0.292373642219257,0.865906574762965,0.584384510907845,0,0.221985953374065,0,0.167884616364078,0,0,0.36630324853453,0.214368379079066,0,1.12950368523413,1.38097570952153,0,1.20297227640581,0.685082519770642,0,2.02506750069542,0.45032120322422,2.26571204492102,1.55328093525546,0,0,0,0.486213434136588,0.628839487883947,0.919217542250071,0,0,0,0,0.25347929989024,0.188626341386076,0.0936415074698824,0.320125762024346,0.229741875822453,0,0.115884325944855,0.38581844092741,0,0.147198920134397,0,0.177475806159338,0.238436189947321,0.145346416632329,0.282328141245992,0.25384382367503,0,0,0.135804113845862,0,0,0.197008964751127,0,0.309873682371932,0.385813221962283,0.249810577937946,0,0.214871054048298,0.382576664137687,0.441182838239031,0
|short_description=p@chr4:140258131..140258153,+
|short_description=p@chr4:140258131..140258153,+
}}
}}

Latest revision as of 01:50, 5 August 2015

Short description:p@chr4:140258131..140258153, +
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chr4:140258131..140258153, +
Coexpression cluster:MCL_coexpression_mm9:925
Association with transcript: NA
EntrezGene:NA
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p@chr4:140258131..140258153+

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.70
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.65
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E78.87
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F29.13
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E64.97
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F12.71
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.68
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.70
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A51.40
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.47
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.10
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.19
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.20
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.91
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.50
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.20
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.78
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.42
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A22.52
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.18
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A12.02
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.15
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.13
Mouse Microglia, donor1.CNhs12629.11718-123C80.90
Mouse Microglia, donor2.CNhs12634.11736-123E81.54
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.66
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.51
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.37
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.31
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.88
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.37
Mouse Schwann, donor1.CNhs12507.11728-123D90.98
Mouse Schwann, donor2.CNhs12573.11746-123F90.68
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.87
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.51
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.52
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.85
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B614.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.65
bone (os femoris), neonate N16.CNhs11225.1525-43A61.10
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.20
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.64
corpora quadrigemina, adult.CNhs10501.16-22A40.15
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D50.70
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.97
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.61
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.45
eyeball, neonate N00.CNhs11207.633-15C60.07
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.09
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.11
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.29
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.85
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.49
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.32
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E80.21
hippocampus, neonate N00.CNhs11228.627-43G10.21
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.93
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.58
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.25
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.47
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.83
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E11.12
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.48
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.49
liver, neonate N03.CNhs11123.1345-25G21.10
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A61.01
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.59
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.35
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.33
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.76
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.96
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.85
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I90.96
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.78
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.42
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G20.34
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C62.38
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.40
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D33.18
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G52.82
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.70
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E22.59
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.31
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.60
thymus, neonate N02.CNhs11181.1541-43F80.84
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C41.01
thymus, neonate N07.CNhs11211.713-19D30.69
thymus, neonate N10.CNhs11194.748-24E40.30
thymus, neonate N20.CNhs11186.820-7A20.29
thymus, neonate N25.CNhs11125.1362-25G70.87
thymus, neonate N30.CNhs11132.1393-42G20.58
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.38
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.20
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.27
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.55
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F20.92
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.14
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.20
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
hematopoietic cell1.55e-1332
hematopoietic oligopotent progenitor cell1.55e-1332
hematopoietic stem cell1.55e-1332
hematopoietic multipotent progenitor cell1.55e-1332
hematopoietic lineage restricted progenitor cell1.46e-1125
connective tissue cell3.55e-1146
mesenchymal cell3.55e-1146
leukocyte1.70e-1017
nongranular leukocyte1.70e-1017
motile cell3.48e-1054
mature alpha-beta T cell6.68e-109
alpha-beta T cell6.68e-109
immature T cell6.68e-109
mature T cell6.68e-109
immature alpha-beta T cell6.68e-109
lymphoid lineage restricted progenitor cell1.02e-0912
lymphocyte7.09e-0913
common lymphoid progenitor7.09e-0913
CD4-positive, alpha-beta T cell4.56e-088
T cell6.04e-0811
pro-T cell6.04e-0811
thymocyte2.55e-076
double negative thymocyte2.55e-076
naive T cell2.55e-076
double-positive, alpha-beta thymocyte2.55e-076
CD4-positive, alpha-beta thymocyte2.55e-076
naive thymus-derived CD4-positive, alpha-beta T cell2.55e-076
DN4 thymocyte2.55e-076
DN1 thymic pro-T cell2.55e-076
DN2 thymocyte2.55e-076
DN3 thymocyte2.55e-076
immature single positive thymocyte2.55e-076
early T lineage precursor2.55e-076
mature CD4 single-positive thymocyte2.55e-076
resting double-positive thymocyte2.55e-076
double-positive blast2.55e-076
CD69-positive double-positive thymocyte2.55e-076
CD69-positive, CD4-positive single-positive thymocyte2.55e-076
CD4-positive, CD8-intermediate double-positive thymocyte2.55e-076
CD24-positive, CD4 single-positive thymocyte2.55e-076

Uber anatomy
Ontology termp-valuen
connective tissue3.55e-1146
occipital lobe1.10e-0710
visual cortex1.10e-0710
neocortex1.10e-0710
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr4:140258131..140258153,%2B&oldid=3845688"