FFCP PHASE1:Mm9::chr6:122711456..122711458,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=6 | |MCL_coexpression_id=6 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:122711456..122711458,+ | |||
|description=CAGE_peak_at_chr6:122711456..122711458,+ | |description=CAGE_peak_at_chr6:122711456..122711458,+ | ||
|id=chr6:122711456..122711458,+ | |id=chr6:122711456..122711458,+ | ||
|ontology_enrichment_celltype=CL:0000117!4.20e-08!23;CL:0000337!4.20e-08!23;CL:0000540!2.56e-07!33;CL:0000047!2.56e-07!33;CL:0000031!2.56e-07!33;CL:0000404!2.56e-07!33 | |ontology_enrichment_celltype=CL:0000117!4.20e-08!23;CL:0000337!4.20e-08!23;CL:0000540!2.56e-07!33;CL:0000047!2.56e-07!33;CL:0000031!2.56e-07!33;CL:0000404!2.56e-07!33 | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2=DOID:0060100,2.69e-10,3;DOID:4045,2.69e-10,3 | |||
|ontology_enrichment_uberon=UBERON:0001017!1.25e-19!73;UBERON:0005743!1.25e-19!73;UBERON:0000073!1.66e-18!75;UBERON:0001016!1.66e-18!75;UBERON:0001049!7.35e-18!52;UBERON:0005068!7.35e-18!52;UBERON:0006241!7.35e-18!52;UBERON:0007135!7.35e-18!52;UBERON:0002346!5.05e-17!71;UBERON:0003075!5.05e-17!71;UBERON:0007284!5.05e-17!71;UBERON:0000955!5.64e-16!50;UBERON:0006238!5.64e-16!50;UBERON:0002616!2.67e-15!49;UBERON:0004121!2.99e-15!102;UBERON:0000924!2.99e-15!102;UBERON:0006601!2.99e-15!102;UBERON:0000033!2.13e-13!63;UBERON:0003080!2.99e-13!40;UBERON:0002780!1.63e-12!39;UBERON:0001890!1.63e-12!39;UBERON:0006240!1.63e-12!39;UBERON:0002020!3.34e-12!34;UBERON:0003056!7.25e-12!49;UBERON:0002791!8.93e-10!29;UBERON:0003528!8.93e-10!29;UBERON:0001893!8.93e-10!29;UBERON:0000153!3.10e-08!94;UBERON:0007811!1.40e-07!86;UBERON:0000956!5.55e-07!21;UBERON:0001869!5.55e-07!21;UBERON:0000203!5.55e-07!21;UBERON:0002021!8.35e-07!10;UBERON:0000411!8.35e-07!10;UBERON:0001950!8.35e-07!10 | |ontology_enrichment_uberon=UBERON:0001017!1.25e-19!73;UBERON:0005743!1.25e-19!73;UBERON:0000073!1.66e-18!75;UBERON:0001016!1.66e-18!75;UBERON:0001049!7.35e-18!52;UBERON:0005068!7.35e-18!52;UBERON:0006241!7.35e-18!52;UBERON:0007135!7.35e-18!52;UBERON:0002346!5.05e-17!71;UBERON:0003075!5.05e-17!71;UBERON:0007284!5.05e-17!71;UBERON:0000955!5.64e-16!50;UBERON:0006238!5.64e-16!50;UBERON:0002616!2.67e-15!49;UBERON:0004121!2.99e-15!102;UBERON:0000924!2.99e-15!102;UBERON:0006601!2.99e-15!102;UBERON:0000033!2.13e-13!63;UBERON:0003080!2.99e-13!40;UBERON:0002780!1.63e-12!39;UBERON:0001890!1.63e-12!39;UBERON:0006240!1.63e-12!39;UBERON:0002020!3.34e-12!34;UBERON:0003056!7.25e-12!49;UBERON:0002791!8.93e-10!29;UBERON:0003528!8.93e-10!29;UBERON:0001893!8.93e-10!29;UBERON:0000153!3.10e-08!94;UBERON:0007811!1.40e-07!86;UBERON:0000956!5.55e-07!21;UBERON:0001869!5.55e-07!21;UBERON:0000203!5.55e-07!21;UBERON:0002021!8.35e-07!10;UBERON:0000411!8.35e-07!10;UBERON:0001950!8.35e-07!10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000955,3.05e-16,47;UBERON:0006238,3.05e-16,47;UBERON:0000073,1.97e-15,54;UBERON:0002616,9.49e-15,46;UBERON:0001017,1.64e-14,73;UBERON:0001049,2.71e-14,52;UBERON:0005068,2.71e-14,52;UBERON:0006241,2.71e-14,52;UBERON:0007135,2.71e-14,52;UBERON:0001016,5.28e-14,75;UBERON:0002021,1.21e-13,10;UBERON:0000411,1.21e-13,10;UBERON:0001950,1.21e-13,10;UBERON:0003080,4.21e-13,40;UBERON:0002780,1.53e-11,39;UBERON:0001890,1.53e-11,39;UBERON:0006240,1.53e-11,39;UBERON:0002346,6.73e-11,64;UBERON:0003075,6.73e-11,64;UBERON:0007284,6.73e-11,64;UBERON:0003056,3.99e-10,49;UBERON:0004121,4.31e-10,95;UBERON:0000924,4.31e-10,95;UBERON:0006601,4.31e-10,95;UBERON:0003528,6.24e-10,29;UBERON:0002791,6.24e-10,29;UBERON:0001893,6.24e-10,29;UBERON:0002619,6.84e-10,17;UBERON:0000956,7.12e-10,21;UBERON:0001869,7.12e-10,21;UBERON:0000203,7.12e-10,21;UBERON:0002020,9.31e-10,34;UBERON:0010371,4.34e-09,73 | |||
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|phase1_expression=0,0,0,0,0,0,0,1.80772652818207,0.140788722151667,0.70219357896598,0,0,0,0.437102012094987,0,0,0,0,0,0,0.850432901510698,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,5.85944283031671,4.6880120671428,2.61761871986899,38.8232782100469,16.3930916390027,4.36959317728038,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0.286533439938757,0,1.21389876515759,1.05798195854407,0.633831403506179,0,0,0,0,0,0.299600110518405,0,0.103689612308478,0.405017814995072,0.420649922702764,1.14260393761521,0.441737081903227,0.244981598429908,0.0958454710182364,0,0,0.638436690425939,2.15049146558741,0,0.274462930807229,1.04182674111352,0.837548997004143,1.12552522006336,0.916789486660861,0.294628585473668,0.569486723196412,0.745597783301202,0,0,0,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0,0,0,0.11418387971906,0.517875767294343,0,0.173485326766136,0.608930956624282,0.230615497256059,0,0.23517741427141,0.125666591329675,0,0,0,0,0,0.484875253135222,0,3.22058876712702,3.14170060220183,0,0.838705871541442,0,0.127070227073065,2.99581278809645,0.457500602818626,0.502617408451458,2.25971616249959,2.81287003063364,1.66230435647648,1.78465389374533,0.101839363850316,0.248813941220186,0,0,0.130120442962704,0,0,0,0.0680364991513279,0.2562274405697,0.187403449119458,0.517406741478031,0,0,0.351902248327898,0.219195732427575,0.556094498451196,0.348252166522167,0,0.199034266818493,0,0,0.568326998791185,0.207125772535502,0.234526059981096,0.36012412292203,0,0,0,0,0,0,0,0,0,0,0,0,1.89260953707715,0.308713837137853,0,0,0.213288250535234,0.464473343720877,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156998727841375,0,0,0,0.196558995113203,0,0,0,0.25462585178142,0,0,0,1.43768206527355,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0.195133647857799,0.157635144106191,0,0,0,0.172684981865896,0,0,0,0,0,0.963303539926752,0.703270119553219,0,0,0,0.390438744296638,0.646270193198397,0,0.668396022247182,0.283076530788832,0.404810701674894,0,0,1.28528526568723,0.141940085208269,0,0,0.329940245945071,0,0,0,0,0,0,0,0,0,0,0,0,2.04263763452273,0,0.776152102696527,0.214337035031592,0.354680467284547,0.535106452806212,0.493647061806363,0,0.23467170806371,0,0,0,0,0.120625849856312,0.119372344003136,0,0,0.741701208042039,0.170870880797853,0,0.555583582109135,0,0,0,0.509935289981566,0.139951452323658,0.138199973804424,0,0,0,0.324016022465404,0,0,0,0.165306911450672,0.26175594198403,0,0,0,0.299033092087958,0.165458490457098,0.777804753376191,0.129159823477731,0.506868376472335,0,0,0.314578033277133,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0.0897138566094757,0,0,0,0,0,0,1.12950368523413,2.30162618253588,0.572895513439397,3.43706364687375,0.685082519770642,0,2.02506750069542,2.2516060161211,3.17199686288943,1.55328093525546,0.518936737920883,0,0.341467211508268,0,0,0.551530525350042,0.222246727801615,0.412070114477788,0,0,0.25347929989024,0,0.280924522409647,0.320125762024346,0.17230640686684,0,0.463537303779422,0.192909220463705,0.412085900803307,0.147198920134397,0,0.354951612318675,0.238436189947321,0,0,0.25384382367503,0.365855945745545,0,0,0.561142271657738,0.118635018124174,0,0,0.309873682371932,0,0.499621155875892,0.233931608445408,0,0,0,0 | ||
|short_description=p@chr6:122711456..122711458,+ | |short_description=p@chr6:122711456..122711458,+ | ||
}} | }} |
Latest revision as of 02:00, 5 August 2015
Short description: | p@chr6:122711456..122711458, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:122711456..122711458, + |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brain | 3.05e-16 | 47 |
future brain | 3.05e-16 | 47 |
regional part of nervous system | 1.97e-15 | 54 |
regional part of brain | 9.49e-15 | 46 |
central nervous system | 1.64e-14 | 73 |
neural tube | 2.71e-14 | 52 |
neural rod | 2.71e-14 | 52 |
future spinal cord | 2.71e-14 | 52 |
neural keel | 2.71e-14 | 52 |
nervous system | 5.28e-14 | 75 |
occipital lobe | 1.21e-13 | 10 |
visual cortex | 1.21e-13 | 10 |
neocortex | 1.21e-13 | 10 |
anterior neural tube | 4.21e-13 | 40 |
regional part of forebrain | 1.53e-11 | 39 |
forebrain | 1.53e-11 | 39 |
future forebrain | 1.53e-11 | 39 |
neurectoderm | 6.73e-11 | 64 |
neural plate | 6.73e-11 | 64 |
presumptive neural plate | 6.73e-11 | 64 |
pre-chordal neural plate | 3.99e-10 | 49 |
ectoderm-derived structure | 4.31e-10 | 95 |
ectoderm | 4.31e-10 | 95 |
presumptive ectoderm | 4.31e-10 | 95 |
brain grey matter | 6.24e-10 | 29 |
regional part of telencephalon | 6.24e-10 | 29 |
telencephalon | 6.24e-10 | 29 |
regional part of cerebral cortex | 6.84e-10 | 17 |
cerebral cortex | 7.12e-10 | 21 |
cerebral hemisphere | 7.12e-10 | 21 |
pallium | 7.12e-10 | 21 |
gray matter | 9.31e-10 | 34 |
ecto-epithelium | 4.34e-09 | 73 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 2.69e-10 | 3 |
muscle cancer | 2.69e-10 | 3 |