FFCP PHASE1:Mm9::chr10:98377623..98377643,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=6 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:98377623..98377643,- | |||
|description=CAGE_peak_at_chr10:98377623..98377643,- | |description=CAGE_peak_at_chr10:98377623..98377643,- | ||
|id=chr10:98377623..98377643,- | |id=chr10:98377623..98377643,- | ||
|ontology_enrichment_celltype=CL:0000063!1.54e-09!66;CL:0000988!2.19e-08!32;CL:0002032!2.19e-08!32;CL:0000037!2.19e-08!32;CL:0000566!2.19e-08!32;CL:0000837!2.19e-08!32;CL:0002563!8.31e-07!9;CL:0002251!8.31e-07!9 | |ontology_enrichment_celltype=CL:0000063!1.54e-09!66;CL:0000988!2.19e-08!32;CL:0002032!2.19e-08!32;CL:0000037!2.19e-08!32;CL:0000566!2.19e-08!32;CL:0000837!2.19e-08!32;CL:0002563!8.31e-07!9;CL:0002251!8.31e-07!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.27e-14,9;CL:0002251,1.27e-14,9;CL:0002076,8.71e-13,15;CL:0000988,3.61e-12,32;CL:0002032,3.61e-12,32;CL:0000037,3.61e-12,32;CL:0000837,3.61e-12,32;CL:0002031,3.14e-10,25;CL:0000066,6.23e-10,25;CL:0000723,2.49e-09,91;CL:0000048,2.49e-09,91;CL:0000034,2.55e-09,97;CL:0000223,4.41e-09,20;CL:0000239,5.03e-09,6;CL:0000677,5.03e-09,6;CL:0000584,5.03e-09,6;CL:0002320,1.22e-08,46;CL:0000134,1.22e-08,46;CL:0000075,1.11e-07,7;CL:0000049,1.16e-07,19;CL:0002250,2.60e-07,3;CL:0000763,2.85e-07,16;CL:0000738,4.24e-07,17;CL:0002087,4.24e-07,17;CL:0000219,7.85e-07,54 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2=DOID:0060100,2.81e-08,3;DOID:4045,2.81e-08,3;DOID:0050686,5.67e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0000344!1.31e-08!15;UBERON:0001242!3.54e-08!13;UBERON:0000060!3.54e-08!13;UBERON:0001262!3.54e-08!13;UBERON:0004786!3.54e-08!13;UBERON:0000485!1.90e-07!11;UBERON:0003350!8.31e-07!9;UBERON:0004808!8.31e-07!9;UBERON:0001277!8.31e-07!9 | |ontology_enrichment_uberon=UBERON:0000344!1.31e-08!15;UBERON:0001242!3.54e-08!13;UBERON:0000060!3.54e-08!13;UBERON:0001262!3.54e-08!13;UBERON:0004786!3.54e-08!13;UBERON:0000485!1.90e-07!11;UBERON:0003350!8.31e-07!9;UBERON:0004808!8.31e-07!9;UBERON:0001277!8.31e-07!9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,1.27e-14,9;UBERON:0004808,1.27e-14,9;UBERON:0001277,1.27e-14,9;UBERON:0001242,4.24e-12,13;UBERON:0001262,4.24e-12,13;UBERON:0004786,4.24e-12,13;UBERON:0000485,1.05e-11,11;UBERON:0000344,2.95e-10,15;UBERON:0002384,1.22e-08,46;UBERON:0002204,1.49e-08,32;UBERON:0002371,4.03e-07,16 | |||
|phase1_expression=0.480446541314382,1.39590163055744,2.27499619694768,3.0246421130683,5.00895729946347,1.00727563147134,0.934450562382103,3.61545305636414,1.12630977721333,0.468129052643987,0.171217968225505,0.159544317990673,3.42401459862411,2.01066925563694,0.333109761815663,0.202475267389826,0.699561878128147,2.20823515750766,1.09691546884591,1.69755860719212,0.255129870453209,0.0992909512008853,0.522399578277871,0.319984845586813,0.91763712426868,1.72269589234506,0,1.07735616342945,0.760093677825496,1.26015064879965,0.443461021310609,0,0,15.8481681015439,2.59966457776147,1.49611180822643,2.6542016314108,19.6709866446347,13.2827008569046,4.18818995179039,34.1174263057988,17.0761371239611,14.5653105909346,0.503587271902309,1.11514624341466,0.734187008646726,0,0.218025156380447,0,0.194429899074283,0.139986421625363,0,3.02008690903925,0.725362142011344,2.68875039313971,0,0,1.03134418455488,0,0,0,0,0,0.449949858640699,0,2.1314403448383,1.19840044207362,0,0,0.270011876663381,0.210324961351382,0.285650984403804,0,0,0,0,0,0.255374676170375,0.153606533256243,0,0.182975287204819,0,0,0,0.45839474333043,0.589257170947335,0,0.186399445825301,0.075726193333184,0.377857800533928,0.869593466105033,0,0,0,0,0,0.140444420131752,0.170430322578058,0.259786004602869,0.35333957451034,0.985903938436763,0,0,0,2.16491041011214,1.26679932737549,0,0,0,0.445326417194474,0.173485326766136,0,0.461230994512117,0.150722640552623,0.117588707135705,0.125666591329675,0.988779870937496,0.289198713839823,0,0,0.220841518460394,0,1.86391761218122,0.292780797011547,1.8850203613211,0.766371165625774,0.599075622529601,4.19931911695385,0.508280908292259,0.149790639404823,0,0.125654352112864,0.521472960576829,0.511430914660661,0.41557608911912,0.324482526135515,0.611036183101898,0.124406970610093,0.505445516867349,0.210441855886474,0.260240885925407,0.459804208866946,0.540186389416048,0.150704817835715,0.0680364991513279,0,0.187403449119458,0.776110112217047,0,0.189106080167819,0.175951124163949,0,0.278047249225598,0,0.205782136407943,0.398068533636986,1.40442637462647,1.80143534980301,0.568326998791185,0.207125772535502,0,0,0,0,0.154267112887378,0,0,0.116765342367169,0,0,0,0.438599962275997,0,0.134206418760372,0,0.205809224758569,0.660837565967596,0.793351699990633,0,0.232236671860439,0.38660238396628,0.201683524623343,0,0.380451252225118,0.474529061544512,0.658795818896044,0.251335208800269,0.198956472041151,0,0,0.216138049874694,0.398282546508734,0.379335801906163,0,0,0.407302655690628,0.193952487167626,0.140271639780637,0.189709611372772,0.147610147979602,0.156998727841375,0.493588655687202,0,0.333690211432188,0,0,0.202860121388503,0.241177159752417,0,0.575392274901621,0,0,0,0,0,0.505157755894224,0,0,0.554259570499814,0.37898282354097,0,0.169745085775188,0.469380496577004,0.502518772325447,1.42826184531608,0.390267295715598,0.315270288212382,0.221464689648775,0.159454768657487,0.81931657357869,0,0.289298117163023,1.50791283939272,0.54390568381871,0.491764273019036,0,0.160550589987792,0,0,0.252470927204373,0,0.780877488593277,0.430846795465598,0.238968797952552,1.11399337041197,0.849229592366497,0,0.292255857911312,0,0,0.283880170416537,0.890328018336276,0.325773918707152,0.164970122972535,0,0,0,0.188605079755898,0,0,0,0,0,0.316036757935816,0,0,0.340439605753788,0.18006109403131,0.258717367565509,0.214337035031592,0,0,0.164549020602121,0.913394847343798,0,0,0,0.16488625294148,0,0.120625849856312,0,0.164140899745061,0,0.370850604021019,0.341741761595705,0.206386867963223,0,0,0,0,0,1.6794174278839,0.552799895217695,0,0.316335993581135,0.203319467126849,0,0.209088296014469,0,0.269728692769641,0.165306911450672,0.26175594198403,0.90730481304255,0,0,0.149516546043979,0,0.194451188344048,0.387479470433193,0.506868376472335,0.234714477291508,0.2604087696879,0.209718688851422,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0.0762068066549998,0,0.194915761479505,0,0.116876902181569,0.226730383615211,0.221985953374065,0.179427713218951,0,0,0,0.183151624267265,0,0,0.564751842617067,0.460325236507177,0,0.68741272937475,0,0,0,0,0,0.51776031175182,0,0.399024873401031,0.341467211508268,0.243106717068294,0,0.367687016900028,0,0,0.320919209591815,0,0,0,0.280924522409647,0.192075457214608,0.114870937911227,0,0,0,0.412085900803307,0,0,0,0,0,0,0.169229215783353,0.182927972872773,0,0.135804113845862,0,0,0,0,0.154936841185966,0,0,0,0.214871054048298,0,0.441182838239031,0 | |phase1_expression=0.480446541314382,1.39590163055744,2.27499619694768,3.0246421130683,5.00895729946347,1.00727563147134,0.934450562382103,3.61545305636414,1.12630977721333,0.468129052643987,0.171217968225505,0.159544317990673,3.42401459862411,2.01066925563694,0.333109761815663,0.202475267389826,0.699561878128147,2.20823515750766,1.09691546884591,1.69755860719212,0.255129870453209,0.0992909512008853,0.522399578277871,0.319984845586813,0.91763712426868,1.72269589234506,0,1.07735616342945,0.760093677825496,1.26015064879965,0.443461021310609,0,0,15.8481681015439,2.59966457776147,1.49611180822643,2.6542016314108,19.6709866446347,13.2827008569046,4.18818995179039,34.1174263057988,17.0761371239611,14.5653105909346,0.503587271902309,1.11514624341466,0.734187008646726,0,0.218025156380447,0,0.194429899074283,0.139986421625363,0,3.02008690903925,0.725362142011344,2.68875039313971,0,0,1.03134418455488,0,0,0,0,0,0.449949858640699,0,2.1314403448383,1.19840044207362,0,0,0.270011876663381,0.210324961351382,0.285650984403804,0,0,0,0,0,0.255374676170375,0.153606533256243,0,0.182975287204819,0,0,0,0.45839474333043,0.589257170947335,0,0.186399445825301,0.075726193333184,0.377857800533928,0.869593466105033,0,0,0,0,0,0.140444420131752,0.170430322578058,0.259786004602869,0.35333957451034,0.985903938436763,0,0,0,2.16491041011214,1.26679932737549,0,0,0,0.445326417194474,0.173485326766136,0,0.461230994512117,0.150722640552623,0.117588707135705,0.125666591329675,0.988779870937496,0.289198713839823,0,0,0.220841518460394,0,1.86391761218122,0.292780797011547,1.8850203613211,0.766371165625774,0.599075622529601,4.19931911695385,0.508280908292259,0.149790639404823,0,0.125654352112864,0.521472960576829,0.511430914660661,0.41557608911912,0.324482526135515,0.611036183101898,0.124406970610093,0.505445516867349,0.210441855886474,0.260240885925407,0.459804208866946,0.540186389416048,0.150704817835715,0.0680364991513279,0,0.187403449119458,0.776110112217047,0,0.189106080167819,0.175951124163949,0,0.278047249225598,0,0.205782136407943,0.398068533636986,1.40442637462647,1.80143534980301,0.568326998791185,0.207125772535502,0,0,0,0,0.154267112887378,0,0,0.116765342367169,0,0,0,0.438599962275997,0,0.134206418760372,0,0.205809224758569,0.660837565967596,0.793351699990633,0,0.232236671860439,0.38660238396628,0.201683524623343,0,0.380451252225118,0.474529061544512,0.658795818896044,0.251335208800269,0.198956472041151,0,0,0.216138049874694,0.398282546508734,0.379335801906163,0,0,0.407302655690628,0.193952487167626,0.140271639780637,0.189709611372772,0.147610147979602,0.156998727841375,0.493588655687202,0,0.333690211432188,0,0,0.202860121388503,0.241177159752417,0,0.575392274901621,0,0,0,0,0,0.505157755894224,0,0,0.554259570499814,0.37898282354097,0,0.169745085775188,0.469380496577004,0.502518772325447,1.42826184531608,0.390267295715598,0.315270288212382,0.221464689648775,0.159454768657487,0.81931657357869,0,0.289298117163023,1.50791283939272,0.54390568381871,0.491764273019036,0,0.160550589987792,0,0,0.252470927204373,0,0.780877488593277,0.430846795465598,0.238968797952552,1.11399337041197,0.849229592366497,0,0.292255857911312,0,0,0.283880170416537,0.890328018336276,0.325773918707152,0.164970122972535,0,0,0,0.188605079755898,0,0,0,0,0,0.316036757935816,0,0,0.340439605753788,0.18006109403131,0.258717367565509,0.214337035031592,0,0,0.164549020602121,0.913394847343798,0,0,0,0.16488625294148,0,0.120625849856312,0,0.164140899745061,0,0.370850604021019,0.341741761595705,0.206386867963223,0,0,0,0,0,1.6794174278839,0.552799895217695,0,0.316335993581135,0.203319467126849,0,0.209088296014469,0,0.269728692769641,0.165306911450672,0.26175594198403,0.90730481304255,0,0,0.149516546043979,0,0.194451188344048,0.387479470433193,0.506868376472335,0.234714477291508,0.2604087696879,0.209718688851422,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0.0762068066549998,0,0.194915761479505,0,0.116876902181569,0.226730383615211,0.221985953374065,0.179427713218951,0,0,0,0.183151624267265,0,0,0.564751842617067,0.460325236507177,0,0.68741272937475,0,0,0,0,0,0.51776031175182,0,0.399024873401031,0.341467211508268,0.243106717068294,0,0.367687016900028,0,0,0.320919209591815,0,0,0,0.280924522409647,0.192075457214608,0.114870937911227,0,0,0,0.412085900803307,0,0,0,0,0,0,0.169229215783353,0.182927972872773,0,0.135804113845862,0,0,0,0,0.154936841185966,0,0,0,0.214871054048298,0,0.441182838239031,0 | ||
|short_description=p@chr10:98377623..98377643,- | |short_description=p@chr10:98377623..98377643,- | ||
}} | }} |
Latest revision as of 02:31, 5 August 2015
Short description: | p@chr10:98377623..98377643, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:98377623..98377643, - |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.27e-14 | 9 |
epithelial cell of alimentary canal | 1.27e-14 | 9 |
endo-epithelial cell | 8.71e-13 | 15 |
hematopoietic cell | 3.61e-12 | 32 |
hematopoietic oligopotent progenitor cell | 3.61e-12 | 32 |
hematopoietic stem cell | 3.61e-12 | 32 |
hematopoietic multipotent progenitor cell | 3.61e-12 | 32 |
hematopoietic lineage restricted progenitor cell | 3.14e-10 | 25 |
epithelial cell | 6.23e-10 | 25 |
somatic stem cell | 2.49e-09 | 91 |
multi fate stem cell | 2.49e-09 | 91 |
stem cell | 2.55e-09 | 97 |
endodermal cell | 4.41e-09 | 20 |
brush border epithelial cell | 5.03e-09 | 6 |
gut absorptive cell | 5.03e-09 | 6 |
enterocyte | 5.03e-09 | 6 |
connective tissue cell | 1.22e-08 | 46 |
mesenchymal cell | 1.22e-08 | 46 |
columnar/cuboidal epithelial cell | 1.11e-07 | 7 |
common myeloid progenitor | 1.16e-07 | 19 |
intestinal crypt stem cell | 2.60e-07 | 3 |
myeloid cell | 2.85e-07 | 16 |
leukocyte | 4.24e-07 | 17 |
nongranular leukocyte | 4.24e-07 | 17 |
motile cell | 7.85e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 1.27e-14 | 9 |
gastrointestinal system epithelium | 1.27e-14 | 9 |
intestinal epithelium | 1.27e-14 | 9 |
intestinal mucosa | 4.24e-12 | 13 |
wall of intestine | 4.24e-12 | 13 |
gastrointestinal system mucosa | 4.24e-12 | 13 |
simple columnar epithelium | 1.05e-11 | 11 |
mucosa | 2.95e-10 | 15 |
connective tissue | 1.22e-08 | 46 |
musculoskeletal system | 1.49e-08 | 32 |
bone marrow | 4.03e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 2.81e-08 | 3 |
muscle cancer | 2.81e-08 | 3 |
organ system cancer | 5.67e-07 | 6 |