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FFCP PHASE1:Mm9::chr7:4744526..4744628,+: Difference between revisions

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{{FFCP|EntrezGene=100039731,19943|HGNC=|MCL_coexpression_id=915|UniProt=P41105,Q5M9J8|association_with_transcript=0bp_to_ENSMUST00000078432,NM_009081,uc009eys.1_5end|description=CAGE_peak_1_at_Gm10051_5end,CAGE_peak_1_at_Rpl28_5end|id=chr7:4744526..4744628,+|ontology_enrichment_celltype=CL:0000117!1.06e-09!23;CL:0000337!1.06e-09!23|ontology_enrichment_celltype_v019_2=CL:0000117,1.06e-09,23;CL:0000337,1.06e-09,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!1.68e-10!75;UBERON:0001016!1.68e-10!75;UBERON:0001049!3.96e-10!52;UBERON:0005068!3.96e-10!52;UBERON:0006241!3.96e-10!52;UBERON:0007135!3.96e-10!52;UBERON:0001017!8.35e-10!73;UBERON:0005743!8.35e-10!73;UBERON:0002020!6.43e-09!34;UBERON:0000955!1.27e-08!50;UBERON:0006238!1.27e-08!50;UBERON:0002616!1.36e-08!49;UBERON:0002346!2.04e-08!71;UBERON:0003075!2.04e-08!71;UBERON:0007284!2.04e-08!71;UBERON:0003080!7.90e-08!40;UBERON:0002780!1.68e-07!39;UBERON:0001890!1.68e-07!39;UBERON:0006240!1.68e-07!39;UBERON:0004121!2.89e-07!102;UBERON:0000924!2.89e-07!102;UBERON:0006601!2.89e-07!102;UBERON:0003056!8.81e-07!49|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.14e-11,54;UBERON:0001016,1.68e-10,75;UBERON:0001049,3.96e-10,52;UBERON:0005068,3.96e-10,52;UBERON:0006241,3.96e-10,52;UBERON:0007135,3.96e-10,52;UBERON:0001017,8.35e-10,73;UBERON:0002020,6.43e-09,34;UBERON:0002346,2.26e-08,64;UBERON:0003075,2.26e-08,64;UBERON:0007284,2.26e-08,64;UBERON:0003080,7.90e-08,40;UBERON:0000955,9.81e-08,47;UBERON:0006238,9.81e-08,47;UBERON:0002616,1.05e-07,46;UBERON:0002780,1.68e-07,39;UBERON:0001890,1.68e-07,39;UBERON:0006240,1.68e-07,39;UBERON:0004121,4.71e-07,95;UBERON:0000924,4.71e-07,95;UBERON:0006601,4.71e-07,95;UBERON:0003056,8.81e-07,49|phase1_expression=44.5213794951327,23.3813523118372,14.1049764210756,13.0059610861937,12.5223932486587,26.8606835059024,31.3040938398004,31.376967596303,82.5021911808767,75.1347129493599,77.9041755426048,97.8804390872778,24.1393029203,35.9297853942079,48.6340252250868,47.9866383713888,49.6688933470984,23.9751245672261,18.0991052359575,24.1902101524877,44.2225108785563,47.0639108692196,36.8291702685899,31.1985224447143,26.6114766037917,28.711598205751,31.4456257196125,33.1825698336269,26.413255304436,24.9509828462331,55.2108971531709,163.202883079125,183.289306700202,158.481681015439,44.7720010614476,53.5275558054345,40.6297018962115,15.4856703372656,24.2213956802378,10.9939986234498,15.2940186888064,15.0270006690858,16.9928623560904,32.4813790376989,33.6571411648788,48.6398893228456,123.61783240699,57.3406161280574,48.9900187497872,38.1082602185596,48.4353018823754,43.1257693094915,40.2678254538567,56.5782470768849,60.4968838456435,50.9373683351175,33.8109459127733,26.2992767061496,90.030825082521,97.334340186054,90.0040592978774,76.2400197155547,83.5937108344471,45.4449357227106,82.0759080930589,56.1279290807419,72.8028268559723,96.4387946357102,68.7462129605207,64.9378563375432,66.0420378643339,103.120005369773,95.6360782320487,58.1831296271032,59.8075739153795,49.6378144769411,68.271846219621,67.6742891851495,69.1229399653096,79.2636589258465,80.9665645881325,82.8252259185248,66.1663707633273,67.5315132038016,64.1752640662602,97.2274332063103,91.4026190730241,84.4389489588612,91.5529677398195,63.6312536099134,26.3776684718527,17.2084775396277,32.638624017972,32.382191498269,22.0923981932207,16.5769948226014,30.1955503283267,61.866207095835,50.3984848929565,55.8276527726338,46.1966416867512,20.5322363862909,43.3168907501298,56.8853362522665,61.9164377292072,56.499250000947,61.1684578467888,28.3176021703269,49.4571357766098,34.1416919849097,84.8343247886404,74.8985076647867,68.0315716905373,49.135580820155,42.5671119831251,34.9353123896498,33.1241256764061,53.7909607742071,24.7690954545965,59.0449002308044,36.8805335828857,32.9715172131951,26.0948465705371,41.8676539726512,38.9570874673026,31.6766748458653,65.5388731047384,73.7880359121891,66.4577287592128,70.8509724384811,52.1550687213234,68.3559675493982,73.1800388009484,65.718872533895,60.6741090113916,53.3773755492923,46.6424286434449,34.3363238883857,40.435641349388,19.1502088856691,71.9566049583752,59.5446450482695,73.4653489605825,50.1847043392931,47.2853669101729,38.4341160854549,42.5405829501169,32.0792179716379,95.9277568551148,65.9980219785689,54.0169951183323,60.7172178824382,51.4387411067356,63.3818943070343,48.7703663286826,62.4967597810069,69.5191055440102,86.2115488834296,61.9476428682392,74.5652781127807,68.0125573945179,55.8192390529146,64.3945680791772,51.5522287178198,52.9136197203707,49.0646623423361,52.5815866743254,38.8828590082674,49.2033951241307,34.9676698488473,28.1308769124119,30.2633973970438,30.517466025456,25.3650131457103,73.1809021003163,81.7062622291518,19.4947081960441,61.6169820326058,83.1824177087412,58.7558779806909,64.0471282770804,53.2444505005624,52.9259744350791,50.6000165459407,31.7934471234823,51.8801707380634,37.4489461112402,39.592337936189,36.0683561170372,22.4704852163555,27.23339428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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:100039731,entrezgene:19943
|HGNC=
|MCL_coexpression_id=915
|TSSclassifier=NA
|UniProt=uniprot:P41105,uniprot:Q5M9J8
|association_with_transcript=0bp_to_ENSMUST00000078432,NM_009081,uc009eys.1_5end
|cluster_id=chr7:4744526..4744628,+
|description=CAGE_peak_1_at_Gm10051_5end,CAGE_peak_1_at_Rpl28_5end
|id=chr7:4744526..4744628,+
|ontology_enrichment_celltype=CL:0000117!1.06e-09!23;CL:0000337!1.06e-09!23
|ontology_enrichment_celltype_v019_2=CL:0000117,1.06e-09,23;CL:0000337,1.06e-09,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!1.68e-10!75;UBERON:0001016!1.68e-10!75;UBERON:0001049!3.96e-10!52;UBERON:0005068!3.96e-10!52;UBERON:0006241!3.96e-10!52;UBERON:0007135!3.96e-10!52;UBERON:0001017!8.35e-10!73;UBERON:0005743!8.35e-10!73;UBERON:0002020!6.43e-09!34;UBERON:0000955!1.27e-08!50;UBERON:0006238!1.27e-08!50;UBERON:0002616!1.36e-08!49;UBERON:0002346!2.04e-08!71;UBERON:0003075!2.04e-08!71;UBERON:0007284!2.04e-08!71;UBERON:0003080!7.90e-08!40;UBERON:0002780!1.68e-07!39;UBERON:0001890!1.68e-07!39;UBERON:0006240!1.68e-07!39;UBERON:0004121!2.89e-07!102;UBERON:0000924!2.89e-07!102;UBERON:0006601!2.89e-07!102;UBERON:0003056!8.81e-07!49
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.14e-11,54;UBERON:0001016,1.68e-10,75;UBERON:0001049,3.96e-10,52;UBERON:0005068,3.96e-10,52;UBERON:0006241,3.96e-10,52;UBERON:0007135,3.96e-10,52;UBERON:0001017,8.35e-10,73;UBERON:0002020,6.43e-09,34;UBERON:0002346,2.26e-08,64;UBERON:0003075,2.26e-08,64;UBERON:0007284,2.26e-08,64;UBERON:0003080,7.90e-08,40;UBERON:0000955,9.81e-08,47;UBERON:0006238,9.81e-08,47;UBERON:0002616,1.05e-07,46;UBERON:0002780,1.68e-07,39;UBERON:0001890,1.68e-07,39;UBERON:0006240,1.68e-07,39;UBERON:0004121,4.71e-07,95;UBERON:0000924,4.71e-07,95;UBERON:0006601,4.71e-07,95;UBERON:0003056,8.81e-07,49
|phase1_expression=44.5213794951327,23.3813523118372,14.1049764210756,13.0059610861937,12.5223932486587,26.8606835059024,31.3040938398004,31.376967596303,82.5021911808767,75.1347129493599,77.9041755426048,97.8804390872778,24.1393029203,35.9297853942079,48.6340252250868,47.9866383713888,49.6688933470984,23.9751245672261,18.0991052359575,24.1902101524877,44.2225108785563,47.0639108692196,36.8291702685899,31.1985224447143,26.6114766037917,28.711598205751,31.4456257196125,33.1825698336269,26.413255304436,24.9509828462331,55.2108971531709,163.202883079125,183.289306700202,158.481681015439,44.7720010614476,53.5275558054345,40.6297018962115,15.4856703372656,24.2213956802378,10.9939986234498,15.2940186888064,15.0270006690858,16.9928623560904,32.4813790376989,33.6571411648788,48.6398893228456,123.61783240699,57.3406161280574,48.9900187497872,38.1082602185596,48.4353018823754,43.1257693094915,40.2678254538567,56.5782470768849,60.4968838456435,50.9373683351175,33.8109459127733,26.2992767061496,90.030825082521,97.334340186054,90.0040592978774,76.2400197155547,83.5937108344471,45.4449357227106,82.0759080930589,56.1279290807419,72.8028268559723,96.4387946357102,68.7462129605207,64.9378563375432,66.0420378643339,103.120005369773,95.6360782320487,58.1831296271032,59.8075739153795,49.6378144769411,68.271846219621,67.6742891851495,69.1229399653096,79.2636589258465,80.9665645881325,82.8252259185248,66.1663707633273,67.5315132038016,64.1752640662602,97.2274332063103,91.4026190730241,84.4389489588612,91.5529677398195,63.6312536099134,26.3776684718527,17.2084775396277,32.638624017972,32.382191498269,22.0923981932207,16.5769948226014,30.1955503283267,61.866207095835,50.3984848929565,55.8276527726338,46.1966416867512,20.5322363862909,43.3168907501298,56.8853362522665,61.9164377292072,56.499250000947,61.1684578467888,28.3176021703269,49.4571357766098,34.1416919849097,84.8343247886404,74.8985076647867,68.0315716905373,49.135580820155,42.5671119831251,34.9353123896498,33.1241256764061,53.7909607742071,24.7690954545965,59.0449002308044,36.8805335828857,32.9715172131951,26.0948465705371,41.8676539726512,38.9570874673026,31.6766748458653,65.5388731047384,73.7880359121891,66.4577287592128,70.8509724384811,52.1550687213234,68.3559675493982,73.1800388009484,65.718872533895,60.6741090113916,53.3773755492923,46.6424286434449,34.3363238883857,40.435641349388,19.1502088856691,71.9566049583752,59.5446450482695,73.4653489605825,50.1847043392931,47.2853669101729,38.4341160854549,42.5405829501169,32.0792179716379,95.9277568551148,65.9980219785689,54.0169951183323,60.7172178824382,51.4387411067356,63.3818943070343,48.7703663286826,62.4967597810069,69.5191055440102,86.2115488834296,61.9476428682392,74.5652781127807,68.0125573945179,55.8192390529146,64.3945680791772,51.5522287178198,52.9136197203707,49.0646623423361,52.5815866743254,38.8828590082674,49.2033951241307,34.9676698488473,28.1308769124119,30.2633973970438,30.517466025456,25.3650131457103,73.1809021003163,81.7062622291518,19.4947081960441,61.6169820326058,83.1824177087412,58.7558779806909,64.0471282770804,53.2444505005624,52.9259744350791,50.6000165459407,31.7934471234823,51.8801707380634,37.4489461112402,39.592337936189,36.0683561170372,22.4704852163555,27.2333942842115,20.3124098719455,93.1269393679631,60.7802087083757,67.6246414038483,58.0406284359146,49.2639317405769,45.3778754690361,37.4992665146846,25.97938604441,29.6727595620198,28.0111562102487,20.1587786419261,87.9273707123816,94.7414356445639,83.6487058071656,66.1323995726519,50.6472035480075,39.9762587296829,40.2774592431135,49.6133793931608,49.1464929606666,63.258010872036,27.9105710751378,22.7787501373629,18.185679212192,24.7568430660239,19.2977408545347,23.0941487708256,65.9430112961287,69.097150011419,62.8056817368196,56.090969340952,35.1763140627813,36.4206770555601,35.7094575579772,32.7881099740877,31.6694506197748,26.1505820598279,25.0710871515079,23.4851575337618,18.8043776155965,10.5553898757491,32.0904353453039,31.4729134732183,52.1520450515944,52.0183911560446,46.1814045173281,157.213612616232,30.2965112645248,37.5454781105345,44.5100168498168,43.5155263420254,34.1725381072149,37.4301772458422,33.4030306330822,35.2185310457158,48.8067282711891,30.8324466798288,52.6966958931764,45.2788871814377,65.5281421495499,55.3815661802159,45.8616941863649,43.8058956521877,91.771080466583,71.9530065576107,69.0294591906587,71.7583599700278,49.1896236710284,39.7979571479061,43.2605138078232,43.1361827845513,53.0941753332171,45.3300016872495,49.5050607591297,35.0652793926402,59.0600388422697,79.6849492101768,72.4459178406782,56.2168540646007,51.3702194693963,55.782117984119,77.9430269733374,55.1478513949719,29.444657850071,38.1514128635084,38.4184969353648,39.0743912604091,48.5519045671655,39.0347564890256,35.4544343449332,28.5651219897254,51.3628086569112,46.6477504578138,46.4370452917251,59.8178323404169,55.5686948163838,57.6849640982726,44.3829656020654,55.9229034679784,64.5176195212063,49.4755906219837,42.9601778106801,88.4159102059273,54.6929366571223,46.8743179166617,46.4176017152121,40.3970742930429,40.594168261831,31.9042339099797,21.4639872426904,26.9599144446929,16.776161453347,149.37862875131,62.3483997003392,62.5433093927829,51.9184672878607,52.9555276258697,44.4354610040747,45.299894117261,47.7850092377297,46.5575489250156,56.0475160316334,68.2631114831141,36.3412788722405,88.5909190818017,77.6494836166094,68.5981945322758,61.4061566139461,43.7098980518783,31.8517941227917,46.0791324784681,38.3672509802961,37.4937488742599,34.5833815019363,33.1356794515158,31.8461195829491,24.4272725559479,27.887837184671,101.891552598696,82.7161757939366,79.7451927729373,35.7400748959552,39.0379548938458,43.9563898241436,46.5179382601573,34.6084751784401,55.9104324190896,71.8107368951196,73.9035212336822,105.861560323712,39.7347861466973,66.4746629702936,61.4270475210943,57.6411140127002,46.6736681253731,49.7049899281747,95.4843597774425,69.8293528451804,57.5372251391432,56.4007583598442,74.4126727329337,55.5207395519043,36.0039699038617,35.8500999595676,44.9286893428541,42.453131576318,36.2475398843043,39.4229053496899,51.5028291084353,50.8359710094662,51.3473092463183,45.7241943631751,36.1559096947949,38.0031164313499,33.3789579650678,31.9421656691642,37.7156177623957,45.0788547644717,43.3953865704124,36.4819505747145,37.0790958836403,43.2380646326467,36.5855945745545,35.5144110441088,44.1363369999051,28.6182558545447,35.2346003828797,35.658622619954,36.4215628421024,44.3119365791863,46.4904932464551,72.9446887578802,40.0023050441648,47.7013739987222,52.0304263227254,35.956401316481,39.8812677267125
|short_description=p1@Gm10051,p1@Rpl28
}}

Revision as of 04:47, 5 August 2015

Short description:p1@Gm10051, p1@Rpl28
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Gm10051_5end, CAGE_peak_1_at_Rpl28_5end
Coexpression cluster:MCL_coexpression_mm9:915
Association with transcript: 0bp_to_ENSMUST00000078432, NM_009081, uc009eys.1_5end
EntrezGene:100039731,19943
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Gm10051p1@Rpl28

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G744.52
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I523.38
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I614.10
CD326+ enterocyte, pool1.CNhs13542.11848-124I313.01
CD326+ enterocyte, pool2.CNhs13197.11849-124I412.52
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I726.86
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I831.30
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E931.38
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E782.50
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F275.13
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E677.90
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F197.88
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E424.14
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E835.93
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A148.63
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A347.99
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A549.67
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A223.98
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A418.10
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A624.19
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A344.22
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H247.06
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I936.83
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D131.20
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D226.61
GP2+ M cell, pool1.CNhs13228.11845-124H928.71
GP2+ M cell, pool2.CNhs13231.11846-124I131.45
GP2+ M cell, pool3.CNhs13240.11847-124I233.18
Ileum epithelium, pool1.CNhs13199.10252-104B926.41
Ileum epithelium, pool2.CNhs13232.10253-104C124.95
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C855.21
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I3163.20
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G6183.29
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E9158.48
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F544.77
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F653.53
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F740.63
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G815.49
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H124.22
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H310.99
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G915.29
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H215.03
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H416.99
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D832.48
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D933.66
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B348.64
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B7123.62
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C257.34
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B848.99
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C338.11
Mouse Astrocytes, donor2.CNhs12078.11552-120C448.44
Mouse Astrocytes, donor3.CNhs12107.11633-122C443.13
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A240.27
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I956.58
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A160.50
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C150.94
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E133.81
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C526.30
Mouse Granule cells, donor1.CNhs12131.11713-123C390.03
Mouse Granule cells, donor2.CNhs12357.11731-123E397.33
Mouse Granule cells, donor3.CNhs12108.11636-122C790.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C676.24
Mouse Meningeal cells, donor3.CNhs12109.11639-122D183.59
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C745.44
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E782.08
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D256.13
Mouse Microglia, donor1.CNhs12629.11718-123C872.80
Mouse Microglia, donor2.CNhs12634.11736-123E896.44
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D568.75
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F564.94
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D966.04
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F1103.12
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D595.64
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D258.18
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F259.81
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D649.64
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D368.27
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F367.67
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D769.12
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D479.26
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F480.97
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D882.83
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E466.17
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E567.53
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I664.18
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D697.23
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F691.40
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E184.44
Mouse Schwann, donor1.CNhs12507.11728-123D991.55
Mouse Schwann, donor2.CNhs12573.11746-123F963.63
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G326.38
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F717.21
Mouse hepatocyte, donor1.CNhs13078.11714-123C432.64
Mouse hepatocyte, donor3.CNhs12615.11637-122C832.38
Mouse hepatocyte, donor6.CNhs13090.11822-124F422.09
Mouse hepatocyte, donor8.CNhs13091.11824-124F616.58
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A730.20
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I761.87
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E350.40
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I855.83
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G646.20
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H120.53
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I843.32
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B656.89
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G161.92
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G256.50
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G361.17
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B628.32
accessory axillary lymph node, adult.CNhs10475.1063-29H949.46
adrenal gland, adult.CNhs10508.49-24D734.14
adrenal gland, embryo E14.CNhs11038.406-44C584.83
adrenal gland, embryo E16.CNhs11004.1254-43D674.90
adrenal gland, embryo E17.CNhs11043.1263-45I168.03
adrenal gland, embryo E18.CNhs11026.1262-18F549.14
adrenal gland, neonate N00.CNhs11191.1311-23C142.57
adrenal gland, neonate N25.CNhs11223.1377-27I334.94
amnion, adult pregnant day17.5.CNhs10488.583-22A833.12
aorta, adult.CNhs10498.46-23H153.79
bone (os femoris), adult.CNhs10483.56-12G224.77
bone (os femoris), neonate N02.CNhs11227.1985-43F559.04
bone (os femoris), neonate N16.CNhs11225.1525-43A636.88
bone (os femoris), neonate N20.CNhs11195.1350-25C332.97
cecum, adult.CNhs10467.37-13H426.09
cerebellum, adult.CNhs10494.15-8B241.87
cerebellum, neonate N30.CNhs11135.1395-42I238.96
colon, adult.CNhs10468.36-18H731.68
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C765.54
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D173.79
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D466.46
corpora quadrigemina, adult.CNhs10501.16-22A470.85
corpus striatum, adult.CNhs10487.19-21D852.16
corpus striatum, neonate N00.CNhs11226.630-43F168.36
cortex, adult.CNhs10473.12-14D573.18
cortex, neonate N30.CNhs11107.1392-42F265.72
diencephalon, adult.CNhs10482.20-12F260.67
diencephalon, neonate N30.CNhs11201.1388-42B253.38
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B146.64
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A234.34
epididymis, adult.CNhs10490.58-23B240.44
eyeball, adult.CNhs10484.31-12G419.15
eyeball, embryo E12.CNhs11016.345-16C671.96
eyeball, embryo E14.CNhs10521.399-16E259.54
eyeball, embryo E15.CNhs10593.426-16C973.47
eyeball, embryo E17.CNhs11023.1261-18D450.18
eyeball, neonate N00.CNhs11207.633-15C647.29
eyeball, neonate N01.CNhs11140.1532-43E738.43
eyeball, neonate N02.CNhs11205.1551-44G842.54
eyeball, neonate N16.CNhs11188.777-19A232.08
forelimb, embryo E11.CNhs10596.335-25E295.93
forelimb, embryo E12.CNhs10600.359-14H266.00
forelimb, embryo E13.CNhs10589.384-1E254.02
forelimb, embryo E14.CNhs10577.413-26A860.72
forelimb, embryo E15.CNhs11007.437-20E751.44
forelimb, embryo E17.CNhs10598.1517-43C463.38
forelimb, embryo E18.CNhs11008.1520-43B548.77
gonad, embryo E13.CNhs11044.1564-45I662.50
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C869.52
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D286.21
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D561.95
heart, embryo E11.CNhs10586.331-24E974.57
heart, embryo E12.CNhs11015.353-12F568.01
heart, embryo E13.CNhs11013.376-3I955.82
heart, embryo E14.CNhs10597.403-26D464.39
heart, embryo E15.CNhs11017.431-16C851.55
heart, embryo E16.CNhs11021.457-17C652.91
heart, embryo E17.CNhs11025.479-18E549.06
heart, embryo E18.CNhs11030.1283-20G352.58
heart, neonate N00.CNhs11213.639-21E338.88
heart, neonate N03.CNhs11221.1349-25I249.20
heart, neonate N10.CNhs11118.749-24G134.97
heart, neonate N16.CNhs11209.782-15G128.13
heart, neonate N20.CNhs11127.821-26I630.26
heart, neonate N25.CNhs11196.1351-25D330.52
heart, neonate N30.CNhs11202.1390-42D225.37
hippocampus, adult.CNhs10478.13-16E873.18
hippocampus, neonate N00.CNhs11228.627-43G181.71
intestinal mucosa, adult.CNhs10506.860-29I319.49
intestine, adult.CNhs10496.178-9A361.62
intestine, embryo E12.CNhs11019.1251-16I583.18
intestine, embryo E13.CNhs11010.381-16D558.76
intestine, embryo E15.CNhs10602.976-16D864.05
intestine, embryo E16.CNhs10585.463-22H453.24
intestine, embryo E17.CNhs10582.482-18D352.93
intestine, embryo E18.CNhs10526.1289-20F750.60
intestine, neonate N00.CNhs11126.644-26D131.79
intestine, neonate N01.CNhs11192.1322-23E951.88
intestine, neonate N06.CNhs11102.688-20B837.45
intestine, neonate N07.CNhs11095.720-20F239.59
intestine, neonate N10.CNhs11098.755-23A536.07
intestine, neonate N20.CNhs11187.827-18D122.47
intestine, neonate N25.CNhs11121.1352-25E327.23
intestine, neonate N30.CNhs11131.1384-42G120.31
kidney, embryo E14.CNhs10606.411-4I993.13
kidney, embryo E15.CNhs10997.434-16F860.78
kidney, embryo E16.CNhs10584.464-22A567.62
kidney, embryo E17.CNhs11028.483-18I258.04
kidney, embryo E18.CNhs11001.1288-20C749.26
kidney, neonate N00.CNhs11214.646-21G745.38
kidney, neonate N10.CNhs11206.758-6D537.50
kidney, neonate N20.CNhs11113.832-19I125.98
kidney, neonate N25.CNhs11122.1353-25F329.67
kidney, neonate N30.CNhs11203.1385-42H128.01
liver, adult pregnant day01.CNhs10466.508-5B220.16
liver, embryo E12.CNhs10601.355-15F887.93
liver, embryo E13.CNhs10524.378-3H694.74
liver, embryo E14.CNhs10594.409-16E183.65
liver, embryo E15.CNhs10520.433-16D766.13
liver, embryo E16.CNhs10523.462-17F550.65
liver, embryo E17.CNhs10510.481-18A339.98
liver, embryo E18.CNhs10579.499-43G440.28
liver, neonate N00.CNhs11117.641-24F449.61
liver, neonate N03.CNhs11123.1345-25G249.15
liver, neonate N06.CNhs11101.684-20A863.26
liver, neonate N07.CNhs11103.716-20H227.91
liver, neonate N10.CNhs11115.751-24B922.78
liver, neonate N20.CNhs11220.823-25A318.19
liver, neonate N25.CNhs11198.1368-26H124.76
liver, neonate N30.CNhs11106.1382-42D119.30
lung, adult.CNhs10474.28-22B123.09
lung, embryo E12.CNhs10522.354-16G265.94
lung, embryo E14.CNhs10604.404-26F869.10
lung, embryo E15.CNhs11020.432-17C562.81
lung, embryo E16.CNhs10998.458-17B656.09
lung, embryo E17.CNhs10605.480-44A635.18
lung, embryo E18.CNhs10583.1287-20I636.42
lung, neonate N00.CNhs11224.640-42C635.71
lung, neonate N06.CNhs11212.683-20E532.79
lung, neonate N07.CNhs11111.715-19A331.67
lung, neonate N10.CNhs11219.750-23E626.15
lung, neonate N20.CNhs11109.822-18A425.07
lung, neonate N25.CNhs11119.1359-25C723.49
lung, neonate N30.CNhs11133.1394-42H218.80
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A110.56
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A132.09
mammary gland, adult lactating day02.CNhs10480.595-22B631.47
mammary gland, adult pregnant day19.CNhs10476.588-5H252.15
medulla oblongata, adult.CNhs10477.17-12C252.02
medulla oblongata, neonate N30.CNhs11200.1396-42A346.18
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C7157.21
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C230.30
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E137.55
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E244.51
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E343.52
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D734.17
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D837.43
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D933.40
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D435.22
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D548.81
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D630.83
olfactory brain, adult.CNhs10489.18-22I952.70
ovary, adult.CNhs10507.91-2I745.28
ovary, embryo E18.CNhs11040.505-44H765.53
ovary, neonate N00.CNhs11217.1299-22I455.38
oviduct, adult pregnant day01.CNhs10500.988-6G645.86
pancreas, adult.CNhs10486.34-16E443.81
pancreas, embryo E14.CNhs11012.405-44F491.77
pancreas, embryo E15.CNhs11042.1556-45F271.95
pancreas, embryo E16.CNhs11003.460-26E569.03
pancreas, embryo E17.CNhs10599.1558-45G371.76
pancreas, embryo E18.CNhs10580.1535-43I749.19
pancreas, neonate N00.CNhs11105.645-26G939.80
pancreas, neonate N01.CNhs11138.1531-43D743.26
pancreas, neonate N02.CNhs11139.1539-43D843.14
pancreas, neonate N16.CNhs11136.787-43B653.09
pancreas, neonate N25.CNhs11094.1555-45E245.33
pancreas, neonate N30.CNhs11182.1548-44H549.51
pituitary gland, adult.CNhs10493.21-1G835.07
pituitary gland, embryo E12.CNhs11018.346-16E659.06
pituitary gland, embryo E13.CNhs11009.370-44C779.68
pituitary gland, embryo E14.CNhs11037.398-44A572.45
pituitary gland, embryo E15.CNhs10592.427-16B956.22
pituitary gland, embryo E16.CNhs11036.449-43F651.37
pituitary gland, embryo E17.CNhs11039.1265-44F555.78
pituitary gland, neonate N00.CNhs11190.1308-22E977.94
placenta, adult pregnant day10.CNhs10472.539-13I755.15
placenta, adult pregnant day17.CNhs10464.577-18G329.44
prostate, adult.CNhs10470.859-1F838.15
skin, adult.CNhs10492.30-1C338.42
skin, neonate N00.CNhs11124.650-25G439.07
skin, neonate N03.CNhs11215.662-22H348.55
skin, neonate N06.CNhs11097.693-20I539.03
skin, neonate N10.CNhs11108.762-6C435.45
small intestine, neonate N16.CNhs11114.790-21I128.57
spinal cord, adult.CNhs10505.24-13C951.36
spleen, adult.CNhs10465.25-2G246.65
spleen, embryo E16.CNhs11035.461-43C146.44
spleen, embryo E18.CNhs11011.1271-21F259.82
spleen, neonate N10.CNhs11116.752-24D155.57
spleen, neonate N20.CNhs11112.824-19H157.68
spleen, neonate N25.CNhs11099.1354-25G344.38
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C655.92
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C964.52
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D349.48
stomach, adult.CNhs10503.33-1H642.96
stomach, embryo E12.CNhs10588.356-43E388.42
stomach, embryo E15.CNhs10603.1252-16G854.69
stomach, embryo E16.CNhs11022.459-17D446.87
stomach, embryo E17.CNhs11006.1035-18D546.42
stomach, embryo E18.CNhs10999.1286-20C640.40
stomach, neonate N03.CNhs11193.1340-24B840.59
stomach, neonate N07.CNhs11210.718-18A931.90
stomach, neonate N25.CNhs11104.1355-25E421.46
stomach, neonate N30.CNhs11134.1386-42I126.96
submandibular gland, adult.CNhs10469.59-29C116.78
testis, adult.CNhs10504.57-7G5149.38
testis, embryo E13.CNhs11031.389-23F562.35
testis, embryo E15.CNhs11034.443-27C562.54
testis, embryo E16.CNhs11033.470-26G551.92
testis, embryo E17.CNhs11029.486-18I552.96
testis, embryo E18.CNhs11027.503-18G544.44
testis, neonate N00.CNhs11189.1300-22B745.30
testis, neonate N07.CNhs11222.726-26I447.79
testis, neonate N10.CNhs11204.763-44D946.56
testis, neonate N20.CNhs11110.839-18H356.05
testis, neonate N30.CNhs11130.1391-42E268.26
thymus, adult.CNhs10471.38-12B536.34
thymus, embryo E14.CNhs11041.402-44I488.59
thymus, embryo E15.CNhs11005.430-45I277.65
thymus, embryo E16.CNhs11002.456-26C568.60
thymus, embryo E17.CNhs10581.478-18C161.41
thymus, embryo E18.CNhs10595.1273-19G443.71
thymus, neonate N02.CNhs11181.1541-43F831.85
thymus, neonate N03.CNhs11137.2104-43C746.08
thymus, neonate N06.CNhs11197.681-26C438.37
thymus, neonate N07.CNhs11211.713-19D337.49
thymus, neonate N10.CNhs11194.748-24E434.58
thymus, neonate N20.CNhs11186.820-7A233.14
thymus, neonate N25.CNhs11125.1362-25G731.85
thymus, neonate N30.CNhs11132.1393-42G224.43
tongue, adult.CNhs10499.32-1B427.89
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H3101.89
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F782.72
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G579.75
urinary bladder, adult.CNhs10481.879-12E435.74
uterus, adult pregnant day19.CNhs10497.590-15F539.04
uterus, adult.CNhs10509.92-27E543.96
vagina, adult.CNhs10502.89-27D546.52
vesicular gland, adult.CNhs10491.51-27F834.61
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A155.91
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A271.81
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A373.90
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7105.86
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A439.73
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A566.47
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A661.43
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A757.64
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A846.67
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A949.70
whole body, embryo E11.CNhs11014.324-5I895.48
whole body, embryo E12.CNhs10587.857-27C969.83
whole body, embryo E13.CNhs10512.372-23H257.54
whole body, embryo E14.5.CNhs10578.420-27D256.40
whole body, embryo E14.CNhs10519.395-14B174.41
whole body, embryo E16.CNhs10514.453-14F255.52
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G536.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G535.85
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G544.93
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G542.45
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G536.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G539.42
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G551.50
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G550.84
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G551.35
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G545.72
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G536.16
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G538.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G533.38
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G531.94
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G537.72
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G545.08
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G543.40
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G536.48
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G537.08
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G543.24
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G536.59
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G535.51
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G544.14
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G528.62
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G535.23
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G535.66
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G536.42
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G544.31
whole body, embryo E17.5.CNhs10513.490-9F946.49
whole body, embryo E17.CNhs10517.475-3I572.94
whole body, embryo E18.CNhs10516.493-3B340.00
whole body, neonate N00.CNhs10525.657-19C247.70
whole body, neonate N01.CNhs10576.659-23C652.03
whole body, neonate N06.CNhs10515.692-21D135.96
whole body, neonate N10.CNhs10518.761-6B439.88





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.06e-0923
neuroblast (sensu Vertebrata)1.06e-0923

Uber anatomy
Ontology termp-valuen
regional part of nervous system4.14e-1154
nervous system1.68e-1075
neural tube3.96e-1052
neural rod3.96e-1052
future spinal cord3.96e-1052
neural keel3.96e-1052
central nervous system8.35e-1073
gray matter6.43e-0934
neurectoderm2.26e-0864
neural plate2.26e-0864
presumptive neural plate2.26e-0864
anterior neural tube7.90e-0840
brain9.81e-0847
future brain9.81e-0847
regional part of brain1.05e-0746
regional part of forebrain1.68e-0739
forebrain1.68e-0739
future forebrain1.68e-0739
ectoderm-derived structure4.71e-0795
ectoderm4.71e-0795
presumptive ectoderm4.71e-0795
pre-chordal neural plate8.81e-0749
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