FFCP PHASE1:Mm9::chr4:149032034..149032054,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=187 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:149032034..149032054,- | |||
|description=CAGE_peak_at_chr4:149032034..149032054,- | |description=CAGE_peak_at_chr4:149032034..149032054,- | ||
|id=chr4:149032034..149032054,- | |id=chr4:149032034..149032054,- | ||
|ontology_enrichment_celltype=CL:0000838!5.30e-23!12;CL:0000542!5.30e-21!13;CL:0000051!5.30e-21!13;CL:0000084!6.35e-21!11;CL:0000827!6.35e-21!11;CL:0000791!8.45e-17!9;CL:0000789!8.45e-17!9;CL:0002420!8.45e-17!9;CL:0002419!8.45e-17!9;CL:0000790!8.45e-17!9;CL:0002031!2.14e-15!25;CL:0000738!2.32e-15!17;CL:0002087!2.32e-15!17;CL:0000624!1.07e-14!8;CL:0000988!3.38e-11!32;CL:0002032!3.38e-11!32;CL:0000037!3.38e-11!32;CL:0000566!3.38e-11!32;CL:0000837!3.38e-11!32;CL:0000893!7.96e-11!6;CL:0002489!7.96e-11!6;CL:0000898!7.96e-11!6;CL:0000809!7.96e-11!6;CL:0000810!7.96e-11!6;CL:0000895!7.96e-11!6;CL:0000808!7.96e-11!6;CL:0000894!7.96e-11!6;CL:0000806!7.96e-11!6;CL:0000807!7.96e-11!6;CL:0000805!7.96e-11!6;CL:0002425!7.96e-11!6;CL:0002436!7.96e-11!6;CL:0002427!7.96e-11!6;CL:0002428!7.96e-11!6;CL:0002429!7.96e-11!6;CL:0002433!7.96e-11!6;CL:0002431!7.96e-11!6;CL:0002432!7.96e-11!6 | |ontology_enrichment_celltype=CL:0000838!5.30e-23!12;CL:0000542!5.30e-21!13;CL:0000051!5.30e-21!13;CL:0000084!6.35e-21!11;CL:0000827!6.35e-21!11;CL:0000791!8.45e-17!9;CL:0000789!8.45e-17!9;CL:0002420!8.45e-17!9;CL:0002419!8.45e-17!9;CL:0000790!8.45e-17!9;CL:0002031!2.14e-15!25;CL:0000738!2.32e-15!17;CL:0002087!2.32e-15!17;CL:0000624!1.07e-14!8;CL:0000988!3.38e-11!32;CL:0002032!3.38e-11!32;CL:0000037!3.38e-11!32;CL:0000566!3.38e-11!32;CL:0000837!3.38e-11!32;CL:0000893!7.96e-11!6;CL:0002489!7.96e-11!6;CL:0000898!7.96e-11!6;CL:0000809!7.96e-11!6;CL:0000810!7.96e-11!6;CL:0000895!7.96e-11!6;CL:0000808!7.96e-11!6;CL:0000894!7.96e-11!6;CL:0000806!7.96e-11!6;CL:0000807!7.96e-11!6;CL:0000805!7.96e-11!6;CL:0002425!7.96e-11!6;CL:0002436!7.96e-11!6;CL:0002427!7.96e-11!6;CL:0002428!7.96e-11!6;CL:0002429!7.96e-11!6;CL:0002433!7.96e-11!6;CL:0002431!7.96e-11!6;CL:0002432!7.96e-11!6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000838,1.61e-37,12;CL:0000542,1.13e-34,13;CL:0000051,1.13e-34,13;CL:0000084,1.22e-28,11;CL:0000827,1.22e-28,11;CL:0000738,1.28e-26,17;CL:0002087,1.28e-26,17;CL:0002031,3.21e-18,25;CL:0000988,2.68e-14,32;CL:0002032,2.68e-14,32;CL:0000037,2.68e-14,32;CL:0000837,2.68e-14,32;CL:0000625,3.62e-14,1;CL:0000945,8.69e-14,1;CL:0000236,8.69e-14,1;CL:0000826,8.69e-14,1;CL:0000791,3.07e-13,9;CL:0000789,3.07e-13,9;CL:0002420,3.07e-13,9;CL:0002419,3.07e-13,9;CL:0000790,3.07e-13,9;CL:0002320,5.17e-10,46;CL:0000134,5.17e-10,46;CL:0000219,1.49e-08,54;CL:0000624,3.77e-07,8 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!8.57e-31!29;UBERON:0002370!3.79e-30!23;UBERON:0000974!3.79e-30!23;UBERON:0004807!3.79e-30!23;UBERON:0005058!3.79e-30!23;UBERON:0003351!3.79e-30!23;UBERON:0009113!3.79e-30!23;UBERON:0003295!3.79e-30!23;UBERON:0009722!3.79e-30!23;UBERON:0005562!3.79e-30!23;UBERON:0007690!3.79e-30!23;UBERON:0006562!1.14e-28!24;UBERON:0003408!1.14e-28!24;UBERON:0001557!1.14e-28!24;UBERON:0001042!1.14e-28!24;UBERON:0008814!1.14e-28!24;UBERON:0009145!1.14e-28!24;UBERON:0000072!6.78e-25!27;UBERON:0002193!5.24e-24!48;UBERON:0002390!1.09e-23!45;UBERON:0003061!1.09e-23!45;UBERON:0000065!5.38e-20!41;UBERON:0001004!2.23e-19!42;UBERON:0000063!5.23e-18!35;UBERON:0005057!6.20e-15!51;UBERON:0002405!2.71e-14!70;UBERON:0003081!4.66e-14!88;UBERON:0001041!6.98e-10!92;UBERON:0003929!1.24e-09!55;UBERON:0005911!1.54e-09!69;UBERON:0000077!4.97e-09!97;UBERON:0002368!1.98e-08!60;UBERON:0000064!4.81e-08!99;UBERON:0002530!2.02e-07!65;UBERON:0000490!3.08e-07!66;UBERON:0000949!4.36e-07!72 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000029,1.16e-13,1;UBERON:0001097,1.16e-13,1;UBERON:0003968,1.16e-13,1;UBERON:0001467,1.16e-13,1;UBERON:0002384,5.17e-10,46 | |||
|phase1_expression=0,0,0,0,0,0,0,0.645616617207881,0.140788722151667,0.468129052643987,0.171217968225505,0.0797721589953364,1.02720437958723,0.524522414513984,0,0,0,0.630924330716475,0.548457734422955,0.42438965179803,0,2.87943758482567,1.04479915655574,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.683045484958446,0,0,0,0,0,0,0,0,0,0,1.8456086666351,2.17608642603403,28.9040667262519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29468941823586,0,0,0,0,0,0,0,0,0.144599356919912,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.554259570499814,0,0,0,0,0,0,0,0,0,0.318909537314974,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.8244312647074,0.161464426695906,0,0,0.164140899745061,0,0,0.170870880797853,0,0,0.565105371014073,0.27338845544205,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0.948033361884535,0.202725215290164,0.616265742988964,0.909445760844565,0.895133478337407,0.596044064343795,0.360586348559907,0.443068581523732,0.302899349844443,0.457240839929999,0.302478555410522,0.682205165178267,0.384847366561318,0.935015217452552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0.645616617207881,0.140788722151667,0.468129052643987,0.171217968225505,0.0797721589953364,1.02720437958723,0.524522414513984,0,0,0,0.630924330716475,0.548457734422955,0.42438965179803,0,2.87943758482567,1.04479915655574,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.683045484958446,0,0,0,0,0,0,0,0,0,0,1.8456086666351,2.17608642603403,28.9040667262519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29468941823586,0,0,0,0,0,0,0,0,0.144599356919912,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.554259570499814,0,0,0,0,0,0,0,0,0,0.318909537314974,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.8244312647074,0.161464426695906,0,0,0.164140899745061,0,0,0.170870880797853,0,0,0.565105371014073,0.27338845544205,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0.948033361884535,0.202725215290164,0.616265742988964,0.909445760844565,0.895133478337407,0.596044064343795,0.360586348559907,0.443068581523732,0.302899349844443,0.457240839929999,0.302478555410522,0.682205165178267,0.384847366561318,0.935015217452552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0,0,0 | ||
|short_description=p@chr4:149032034..149032054,- | |short_description=p@chr4:149032034..149032054,- | ||
}} | }} |
Latest revision as of 04:53, 5 August 2015
Short description: | p@chr4:149032034..149032054, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:149032034..149032054, - |
Coexpression cluster: | MCL_coexpression_mm9:187 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 1.61e-37 | 12 |
lymphocyte | 1.13e-34 | 13 |
common lymphoid progenitor | 1.13e-34 | 13 |
T cell | 1.22e-28 | 11 |
pro-T cell | 1.22e-28 | 11 |
leukocyte | 1.28e-26 | 17 |
nongranular leukocyte | 1.28e-26 | 17 |
hematopoietic lineage restricted progenitor cell | 3.21e-18 | 25 |
hematopoietic cell | 2.68e-14 | 32 |
hematopoietic oligopotent progenitor cell | 2.68e-14 | 32 |
hematopoietic stem cell | 2.68e-14 | 32 |
hematopoietic multipotent progenitor cell | 2.68e-14 | 32 |
CD8-positive, alpha-beta T cell | 3.62e-14 | 1 |
lymphocyte of B lineage | 8.69e-14 | 1 |
B cell | 8.69e-14 | 1 |
pro-B cell | 8.69e-14 | 1 |
mature alpha-beta T cell | 3.07e-13 | 9 |
alpha-beta T cell | 3.07e-13 | 9 |
immature T cell | 3.07e-13 | 9 |
mature T cell | 3.07e-13 | 9 |
immature alpha-beta T cell | 3.07e-13 | 9 |
connective tissue cell | 5.17e-10 | 46 |
mesenchymal cell | 5.17e-10 | 46 |
motile cell | 1.49e-08 | 54 |
CD4-positive, alpha-beta T cell | 3.77e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
lymph node | 1.16e-13 | 1 |
axillary lymph node | 1.16e-13 | 1 |
peripheral lymph node | 1.16e-13 | 1 |
shoulder | 1.16e-13 | 1 |
connective tissue | 5.17e-10 | 46 |