FFCP PHASE1:Mm9::chr4:151235807..151235870,-: Difference between revisions
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{{FFCP|EntrezGene=100072|HGNC=|MCL_coexpression_id=311|UniProt=A2A891,Q3TYE0|association_with_transcript=0bp_to_ENSMUST00000049790,ENSMUST00000135780,ENSMUST00000147300,ENSMUST00000153938_5end|description=CAGE_peak_1_at_Camta1_5end|id=chr4:151235807..151235870,-|ontology_enrichment_celltype=CL:0000117!8.48e-08!23;CL:0000337!8.48e-08!23;CL:0000221!2.69e-07!44;CL:0000133!2.69e-07!44;CL:0002319!3.36e-07!43|ontology_enrichment_celltype_v019_2=CL:0000117,8.48e-08,23;CL:0000337,8.48e-08,23;CL:0000221,2.69e-07,44;CL:0000133,2.69e-07,44;CL:0002319,3.36e-07,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!5.90e-16!73;UBERON:0005743!5.90e-16!73;UBERON:0000073!6.68e-15!75;UBERON:0001016!6.68e-15!75;UBERON:0001049!1.58e-13!52;UBERON:0005068!1.58e-13!52;UBERON:0006241!1.58e-13!52;UBERON:0007135!1.58e-13!52;UBERON:0000955!1.48e-12!50;UBERON:0006238!1.48e-12!50;UBERON:0002616!4.02e-12!49;UBERON:0000033!6.81e-12!63;UBERON:0004121!1.88e-10!102;UBERON:0000924!1.88e-10!102;UBERON:0006601!1.88e-10!102;UBERON:0002020!5.15e-10!34;UBERON:0000025!5.46e-10!114;UBERON:0002346!1.45e-09!71;UBERON:0003075!1.45e-09!71;UBERON:0007284!1.45e-09!71;UBERON:0004111!8.06e-09!122;UBERON:0007100!2.86e-08!18;UBERON:0000948!2.86e-08!18;UBERON:0005498!2.86e-08!18;UBERON:0004140!2.86e-08!18;UBERON:0009881!2.86e-08!18;UBERON:0004141!2.86e-08!18;UBERON:0003084!2.86e-08!18;UBERON:0007005!2.86e-08!18;UBERON:0004139!2.86e-08!18;UBERON:0004291!2.86e-08!18;UBERON:0003080!8.29e-08!40;UBERON:0007811!8.57e-08!86;UBERON:0002791!1.29e-07!29;UBERON:0003528!1.29e-07!29;UBERON:0001893!1.29e-07!29;UBERON:0003076!1.33e-07!12;UBERON:0003057!1.33e-07!12;UBERON:0003056!1.33e-07!49;UBERON:0000153!2.08e-07!94;UBERON:0002780!2.51e-07!39;UBERON:0001890!2.51e-07!39;UBERON:0006240!2.51e-07!39|ontology_enrichment_uberon_v019_2=UBERON:0010314,7.44e-17,92;UBERON:0001017,5.90e-16,73;UBERON:0001016,6.68e-15,75;UBERON:0000073,1.13e-14,54;UBERON:0001049,1.58e-13,52;UBERON:0005068,1.58e-13,52;UBERON:0006241,1.58e-13,52;UBERON:0007135,1.58e-13,52;UBERON:0004121,1.46e-12,95;UBERON:0000924,1.46e-12,95;UBERON:0006601,1.46e-12,95;UBERON:0002346,3.84e-12,64;UBERON:0003075,3.84e-12,64;UBERON:0007284,3.84e-12,64;UBERON:0000955,7.11e-11,47;UBERON:0006238,7.11e-11,47;UBERON:0010371,1.31e-10,73;UBERON:0002616,1.86e-10,46;UBERON:0002020,5.15e-10,34;UBERON:0000025,5.46e-10,114;UBERON:0004111,8.06e-09,122;UBERON:0007100,2.86e-08,18;UBERON:0000948,2.86e-08,18;UBERON:0005498,2.86e-08,18;UBERON:0004140,2.86e-08,18;UBERON:0009881,2.86e-08,18;UBERON:0004141,2.86e-08,18;UBERON:0003084,2.86e-08,18;UBERON:0007005,2.86e-08,18;UBERON:0004139,2.86e-08,18;UBERON:0004291,2.86e-08,18;UBERON:0003080,8.29e-08,40;UBERON:0003528,1.29e-07,29;UBERON:0002791,1.29e-07,29;UBERON:0001893,1.29e-07,29;UBERON:0003076,1.33e-07,12;UBERON:0003057,1.33e-07,12;UBERON:0003056,1.33e-07,49;UBERON:0002780,2.51e-07,39;UBERON:0001890,2.51e-07,39;UBERON:0006240,2.51e-07,39|phase1_expression=14.8938427807458,4.88565570695105,5.0049916332849,2.41971369045464,2.00358291978539,5.20425742926858,3.97141489012394,8.13476937681931,24.6380263765417,24.3427107374873,17.1217968225505,20.0228119078294,8.73123722649149,8.65461983948074,19.6534759471241,13.5658429151183,23.0855419782288,10.4102514568218,8.63820931716154,7.21462408056651,20.5804762165589,15.3900974361372,14.1047886135025,3.35984087866154,5.27641346454491,5.16808767703518,5.59990595006797,5.60225204983311,4.3705386474966,3.52842181663903,6.20845429834853,11.4305521222734,10.4561013889377,0,11.8429164098023,12.6338330472454,9.80012910059372,11.3003540298965,15.626706890476,8.89990364755457,6.47054636834116,9.56263678941824,16.9928623560904,3.27331726736501,3.4468156614635,6.24058957349717,15.6478268869608,41.8608300250457,21.0898735425093,27.414615769474,26.1774608439428,23.0004102983955,11.4092172119261,6.5282592781021,8.73843877770406,16.7218633423366,12.8940047972441,13.4074743992135,22.0524942336962,19.0436752537932,19.0149421051854,17.6199156675949,13.3394219416671,14.3983954765024,18.7884608887725,17.7620028736525,22.7696083993988,33.0427742576537,16.4866483570479,12.2855403881839,14.9330722559481,35.4207220660716,27.6085676189517,18.741092279888,22.9070675733585,15.6267193723704,38.540558349786,39.8384494825786,43.6242554447731,19.5191705840687,24.1527379110361,14.0646610050325,43.273364845214,23.6360296213306,32.0876320331301,25.3380583507354,32.1759998605973,30.9423080069999,8.93569081331572,10.9578762154839,20.2905142091174,12.9063581547208,6.79971333707751,7.55584468292944,6.49776417447669,8.96053774194671,15.308441794361,10.9075406449957,10.1316541795119,16.9602995764963,16.9012103732017,10.2661181931454,5.09610479413291,0,9.74209684550464,8.86759529162845,7.07734223020697,10.8474685733107,21.4918443427153,11.2816025689267,8.15381035800839,10.6562917409249,11.5307748628029,11.0027527603414,11.0533384707563,10.8073268543521,5.43828929015623,16.7735254027098,19.4614321428972,19.0884882937943,21.4216272906582,16.485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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:100072 | |||
|HGNC= | |||
|MCL_coexpression_id=311 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:A2A891,uniprot:Q3TYE0 | |||
|association_with_transcript=0bp_to_ENSMUST00000049790,ENSMUST00000135780,ENSMUST00000147300,ENSMUST00000153938_5end | |||
|cluster_id=chr4:151235807..151235870,- | |||
|description=CAGE_peak_1_at_Camta1_5end | |||
|id=chr4:151235807..151235870,- | |||
|ontology_enrichment_celltype=CL:0000117!8.48e-08!23;CL:0000337!8.48e-08!23;CL:0000221!2.69e-07!44;CL:0000133!2.69e-07!44;CL:0002319!3.36e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,8.48e-08,23;CL:0000337,8.48e-08,23;CL:0000221,2.69e-07,44;CL:0000133,2.69e-07,44;CL:0002319,3.36e-07,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!5.90e-16!73;UBERON:0005743!5.90e-16!73;UBERON:0000073!6.68e-15!75;UBERON:0001016!6.68e-15!75;UBERON:0001049!1.58e-13!52;UBERON:0005068!1.58e-13!52;UBERON:0006241!1.58e-13!52;UBERON:0007135!1.58e-13!52;UBERON:0000955!1.48e-12!50;UBERON:0006238!1.48e-12!50;UBERON:0002616!4.02e-12!49;UBERON:0000033!6.81e-12!63;UBERON:0004121!1.88e-10!102;UBERON:0000924!1.88e-10!102;UBERON:0006601!1.88e-10!102;UBERON:0002020!5.15e-10!34;UBERON:0000025!5.46e-10!114;UBERON:0002346!1.45e-09!71;UBERON:0003075!1.45e-09!71;UBERON:0007284!1.45e-09!71;UBERON:0004111!8.06e-09!122;UBERON:0007100!2.86e-08!18;UBERON:0000948!2.86e-08!18;UBERON:0005498!2.86e-08!18;UBERON:0004140!2.86e-08!18;UBERON:0009881!2.86e-08!18;UBERON:0004141!2.86e-08!18;UBERON:0003084!2.86e-08!18;UBERON:0007005!2.86e-08!18;UBERON:0004139!2.86e-08!18;UBERON:0004291!2.86e-08!18;UBERON:0003080!8.29e-08!40;UBERON:0007811!8.57e-08!86;UBERON:0002791!1.29e-07!29;UBERON:0003528!1.29e-07!29;UBERON:0001893!1.29e-07!29;UBERON:0003076!1.33e-07!12;UBERON:0003057!1.33e-07!12;UBERON:0003056!1.33e-07!49;UBERON:0000153!2.08e-07!94;UBERON:0002780!2.51e-07!39;UBERON:0001890!2.51e-07!39;UBERON:0006240!2.51e-07!39 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,7.44e-17,92;UBERON:0001017,5.90e-16,73;UBERON:0001016,6.68e-15,75;UBERON:0000073,1.13e-14,54;UBERON:0001049,1.58e-13,52;UBERON:0005068,1.58e-13,52;UBERON:0006241,1.58e-13,52;UBERON:0007135,1.58e-13,52;UBERON:0004121,1.46e-12,95;UBERON:0000924,1.46e-12,95;UBERON:0006601,1.46e-12,95;UBERON:0002346,3.84e-12,64;UBERON:0003075,3.84e-12,64;UBERON:0007284,3.84e-12,64;UBERON:0000955,7.11e-11,47;UBERON:0006238,7.11e-11,47;UBERON:0010371,1.31e-10,73;UBERON:0002616,1.86e-10,46;UBERON:0002020,5.15e-10,34;UBERON:0000025,5.46e-10,114;UBERON:0004111,8.06e-09,122;UBERON:0007100,2.86e-08,18;UBERON:0000948,2.86e-08,18;UBERON:0005498,2.86e-08,18;UBERON:0004140,2.86e-08,18;UBERON:0009881,2.86e-08,18;UBERON:0004141,2.86e-08,18;UBERON:0003084,2.86e-08,18;UBERON:0007005,2.86e-08,18;UBERON:0004139,2.86e-08,18;UBERON:0004291,2.86e-08,18;UBERON:0003080,8.29e-08,40;UBERON:0003528,1.29e-07,29;UBERON:0002791,1.29e-07,29;UBERON:0001893,1.29e-07,29;UBERON:0003076,1.33e-07,12;UBERON:0003057,1.33e-07,12;UBERON:0003056,1.33e-07,49;UBERON:0002780,2.51e-07,39;UBERON:0001890,2.51e-07,39;UBERON:0006240,2.51e-07,39 | |||
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| |||
|short_description=p1@Camta1 | |||
}} |
Revision as of 05:52, 5 August 2015
Short description: | p1@Camta1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Camta1_5end |
Coexpression cluster: | MCL_coexpression_mm9:311 |
Association with transcript: | 0bp_to_ENSMUST00000049790, ENSMUST00000135780, ENSMUST00000147300, ENSMUST00000153938_5end |
EntrezGene: | 100072 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 8.48e-08 | 23 |
neuroblast (sensu Vertebrata) | 8.48e-08 | 23 |
ectodermal cell | 2.69e-07 | 44 |
neurectodermal cell | 2.69e-07 | 44 |
neural cell | 3.36e-07 | 43 |