FFCP PHASE1:Mm9::chr17:66355009..66355022,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=67 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:66355009..66355022,+ | |||
|description=CAGE_peak_at_chr17:66355009..66355022,+ | |description=CAGE_peak_at_chr17:66355009..66355022,+ | ||
|id=chr17:66355009..66355022,+ | |id=chr17:66355009..66355022,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0002476,1.38e-13,2;CL:0002092,8.49e-09,3;CL:0002540,8.49e-09,3;CL:0000213,2.79e-07,1;CL:0002078,2.79e-07,1;CL:0000115,2.79e-07,1;CL:0002262,2.79e-07,1;CL:1000398,2.79e-07,1;CL:0000057,3.20e-07,1;CL:0000632,3.20e-07,1;CL:0002194,3.21e-07,4;CL:0000766,3.21e-07,4;CL:0000234,3.21e-07,4;CL:0000576,3.21e-07,4;CL:0000235,3.21e-07,4;CL:0000864,3.21e-07,4;CL:0002009,3.21e-07,4;CL:0000040,3.21e-07,4;CL:0000559,3.21e-07,4 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!9.83e-07!70 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002394,2.79e-07,1;UBERON:0001281,2.79e-07,1;UBERON:0000353,2.79e-07,1;UBERON:0003497,2.79e-07,1;UBERON:0003909,2.79e-07,1;UBERON:0003928,2.79e-07,1;UBERON:0003835,2.79e-07,1;UBERON:0003513,2.79e-07,1;UBERON:0001280,2.79e-07,1;UBERON:0004647,2.79e-07,1;UBERON:0002294,2.79e-07,1;UBERON:0001173,2.79e-07,1;UBERON:0004912,2.79e-07,1;UBERON:0005171,2.79e-07,1;UBERON:0000996,6.32e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0.467225281191051,0,0,0,0.171217968225505,0,0,0,0.333109761815663,0.202475267389826,0,0.315462165358238,0,0.42438965179803,0.0850432901510698,0,0.522399578277871,0.47997726838022,0,0,0,0,0.190023419456374,0,0,0,0,0,0.288851619751275,0.332469290716985,0.408338712524738,0.837063261473815,0.7813353445238,0,0,1.36609096991689,0.485510353031154,2.01434908760924,0.811015449756117,0.367093504323363,3.12956537739216,0,0.219686182734472,0,0.139986421625363,0,0,0,0,0,0,0.515672092277442,0,0,0,0.338844532069132,0.889294796111139,0,1.97773272513395,1.4209602298922,0.898800331555214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227178579999552,0.529000920747499,1.73918693221007,1.72084775396277,0,0,0.649776417447669,0.448026887097336,0.140444420131752,0.681721290312231,2.07828803682295,0.70667914902068,0,0,0,0,0.216491041011214,0.760079596425296,0,0.45673551887624,0.517875767294343,0.148442139064825,0,0,0,0,0,0,0,0.144599356919912,0,0.161766849947409,0.220841518460394,0,0,0,0.209446706813455,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0.248813941220186,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0.439100230582101,0.134206418760372,0,0,0,0,0,0,0,0,0.22237804384487,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0.126473074248515,0,0,0.246794327843601,1.1858105083486,0,0,0,0,0,0,0.287696137450811,0,0.549122826376163,0,0.372140947668503,0.312037673114561,1.51547326768267,1.4351793081753,0,0,0,0,0.169745085775188,0,0.167506257441816,0.238043640886014,0.195133647857799,0.157635144106191,0,0,0.163863314715738,0.172684981865896,0.289298117163023,24.1266054302836,20.668415985111,0.491764273019036,0,0,0,0.491804836130026,0,0,0,0,0.238968797952552,0,0,0,0,0,0,0,0,0.162886959353576,0.494910368917606,0,0,0,0,0.295301892880773,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0.304464949114599,0.23467170806371,0.21183207086382,0,0.16488625294148,0,0,0,0.164140899745061,0.291480836629851,0,0,0,0.185194527369712,0,0.136694227721025,0.228778173206523,0,0,0.138199973804424,0,0,0,0,0,0.218362563746178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0.405450430580328,1.1298205288131,0.51968329191118,0,0,0.120195449519969,0,0,0.0762068066549998,0.100826185136841,0.0974578807397524,0.192423683280659,0.116876902181569,0,0,0,0,0.386379188064381,0.375364950902364,0.549454872801795,1.2862102744744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0.0936415074698824,0.0640251524048693,0,0,0,0,0,0,0.342869252385415,0,0,0,0.0941093804153306,0.0846146078916765,0,0,0,0.561142271657738,0,0,0,0,0,0,0,0,0,0.220591419119515,0 | |phase1_expression=0,0,0,0,0,0,0.467225281191051,0,0,0,0.171217968225505,0,0,0,0.333109761815663,0.202475267389826,0,0.315462165358238,0,0.42438965179803,0.0850432901510698,0,0.522399578277871,0.47997726838022,0,0,0,0,0.190023419456374,0,0,0,0,0,0.288851619751275,0.332469290716985,0.408338712524738,0.837063261473815,0.7813353445238,0,0,1.36609096991689,0.485510353031154,2.01434908760924,0.811015449756117,0.367093504323363,3.12956537739216,0,0.219686182734472,0,0.139986421625363,0,0,0,0,0,0,0.515672092277442,0,0,0,0.338844532069132,0.889294796111139,0,1.97773272513395,1.4209602298922,0.898800331555214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227178579999552,0.529000920747499,1.73918693221007,1.72084775396277,0,0,0.649776417447669,0.448026887097336,0.140444420131752,0.681721290312231,2.07828803682295,0.70667914902068,0,0,0,0,0.216491041011214,0.760079596425296,0,0.45673551887624,0.517875767294343,0.148442139064825,0,0,0,0,0,0,0,0.144599356919912,0,0.161766849947409,0.220841518460394,0,0,0,0.209446706813455,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0.248813941220186,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0.439100230582101,0.134206418760372,0,0,0,0,0,0,0,0,0.22237804384487,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0.126473074248515,0,0,0.246794327843601,1.1858105083486,0,0,0,0,0,0,0.287696137450811,0,0.549122826376163,0,0.372140947668503,0.312037673114561,1.51547326768267,1.4351793081753,0,0,0,0,0.169745085775188,0,0.167506257441816,0.238043640886014,0.195133647857799,0.157635144106191,0,0,0.163863314715738,0.172684981865896,0.289298117163023,24.1266054302836,20.668415985111,0.491764273019036,0,0,0,0.491804836130026,0,0,0,0,0.238968797952552,0,0,0,0,0,0,0,0,0.162886959353576,0.494910368917606,0,0,0,0,0.295301892880773,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0.304464949114599,0.23467170806371,0.21183207086382,0,0.16488625294148,0,0,0,0.164140899745061,0.291480836629851,0,0,0,0.185194527369712,0,0.136694227721025,0.228778173206523,0,0,0.138199973804424,0,0,0,0,0,0.218362563746178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0.405450430580328,1.1298205288131,0.51968329191118,0,0,0.120195449519969,0,0,0.0762068066549998,0.100826185136841,0.0974578807397524,0.192423683280659,0.116876902181569,0,0,0,0,0.386379188064381,0.375364950902364,0.549454872801795,1.2862102744744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0.0936415074698824,0.0640251524048693,0,0,0,0,0,0,0.342869252385415,0,0,0,0.0941093804153306,0.0846146078916765,0,0,0,0.561142271657738,0,0,0,0,0,0,0,0,0,0.220591419119515,0 | ||
|short_description=p@chr17:66355009..66355022,+ | |short_description=p@chr17:66355009..66355022,+ | ||
}} | }} |
Latest revision as of 05:57, 5 August 2015
Short description: | p@chr17:66355009..66355022, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:66355009..66355022, + |
Coexpression cluster: | MCL_coexpression_mm9:67 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow macrophage | 1.38e-13 | 2 |
bone marrow cell | 8.49e-09 | 3 |
mesenchymal stem cell of the bone marrow | 8.49e-09 | 3 |
lining cell | 2.79e-07 | 1 |
meso-epithelial cell | 2.79e-07 | 1 |
endothelial cell | 2.79e-07 | 1 |
endothelial cell of sinusoid | 2.79e-07 | 1 |
endothelial cell of hepatic sinusoid | 2.79e-07 | 1 |
fibroblast | 3.20e-07 | 1 |
hepatic stellate cell | 3.20e-07 | 1 |
monopoietic cell | 3.21e-07 | 4 |
myeloid leukocyte | 3.21e-07 | 4 |
phagocyte | 3.21e-07 | 4 |
monocyte | 3.21e-07 | 4 |
macrophage | 3.21e-07 | 4 |
tissue-resident macrophage | 3.21e-07 | 4 |
macrophage dendritic cell progenitor | 3.21e-07 | 4 |
monoblast | 3.21e-07 | 4 |
promonocyte | 3.21e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
bile duct | 2.79e-07 | 1 |
hepatic sinusoid | 2.79e-07 | 1 |
parenchyma | 2.79e-07 | 1 |
abdomen blood vessel | 2.79e-07 | 1 |
sinusoid | 2.79e-07 | 1 |
digestive system duct | 2.79e-07 | 1 |
abdominal segment blood vessel | 2.79e-07 | 1 |
trunk blood vessel | 2.79e-07 | 1 |
liver parenchyma | 2.79e-07 | 1 |
liver lobule | 2.79e-07 | 1 |
biliary system | 2.79e-07 | 1 |
biliary tree | 2.79e-07 | 1 |
biliary bud | 2.79e-07 | 1 |
hepatic duct | 2.79e-07 | 1 |
vagina | 6.32e-07 | 1 |