FFCP PHASE1:Mm9::chr9:50369425..50369436,-: Difference between revisions
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{{FFCP|EntrezGene=66654|HGNC=|MCL_coexpression_id=70|UniProt=Q9CR81|association_with_transcript=-52bp_to_ENSMUST00000034568,NM_025687,uc009pjs.1,uc009pjt.1_5end|description=CAGE_peak_3_at_Tex12_5end|id=chr9:50369425..50369436,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000991!1.67e-42!18;UBERON:0005564!1.67e-42!18;UBERON:0003133!5.08e-40!24;UBERON:0004176!2.92e-39!17;UBERON:0009196!2.92e-39!17;UBERON:0009117!2.92e-39!17;UBERON:0005156!1.08e-36!26;UBERON:0000990!1.08e-36!26;UBERON:0000473!3.29e-30!14;UBERON:0003135!4.64e-28!15;UBERON:0003101!3.54e-26!16;UBERON:0000079!3.54e-26!16;UBERON:0002323!3.63e-19!37;UBERON:0004458!3.63e-19!37;UBERON:0003886!1.39e-18!38;UBERON:0002553!4.96e-18!39;UBERON:0000464!2.15e-11!57;UBERON:0000992!1.34e-10!3;UBERON:0005631!1.82e-10!3;UBERON:0000478!1.82e-10!3;UBERON:0000158!1.82e-10!3;UBERON:0003134!2.86e-10!8;UBERON:0000474!4.18e-09!9;UBERON:0001987!1.42e-07!2;UBERON:0003124!1.42e-07!2;UBERON:0004340!1.42e-07!2;UBERON:0003100!2.08e-07!11;UBERON:0000466!2.15e-07!79|ontology_enrichment_uberon_v019_2=UBERON:0000991,4.63e-53,18;UBERON:0005564,4.63e-53,18;UBERON:0000473,7.08e-48,14;UBERON:0004176,2.14e-47,17;UBERON:0009196,2.14e-47,17;UBERON:0009117,2.14e-47,17;UBERON:0003135,1.23e-44,15;UBERON:0003101,8.37e-42,16;UBERON:0000079,8.37e-42,16;UBERON:0003133,1.39e-39,24;UBERON:0005156,1.80e-36,26;UBERON:0000990,1.80e-36,26;UBERON:0002323,2.39e-25,37;UBERON:0004458,2.39e-25,37;UBERON:0003886,1.18e-24,38;UBERON:0002553,5.37e-24,39;UBERON:0000926,5.46e-07,120;UBERON:0004120,5.46e-07,120;UBERON:0006603,5.46e-07,120|phase1_expression=0,0,0,0.30246421130683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.38121212422995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.186399445825301,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19420560091096,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0.228497025219458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.712262414669021,1.30309567482861,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0.847328283455281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.6560164057889,1.64468200648377,2.48187735685646,2.91676782516071,0.904118764344118,3.04121025883401,1.05621514781179,2.3436789271911,8.49360689848258,16.4277202161684,8.64090018773596,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p3@Tex12}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:66654 | |||
|HGNC= | |||
|MCL_coexpression_id=70 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q9CR81 | |||
|association_with_transcript=-52bp_to_ENSMUST00000034568,NM_025687,uc009pjs.1,uc009pjt.1_5end | |||
|cluster_id=chr9:50369425..50369436,- | |||
|description=CAGE_peak_3_at_Tex12_5end | |||
|id=chr9:50369425..50369436,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000991!1.67e-42!18;UBERON:0005564!1.67e-42!18;UBERON:0003133!5.08e-40!24;UBERON:0004176!2.92e-39!17;UBERON:0009196!2.92e-39!17;UBERON:0009117!2.92e-39!17;UBERON:0005156!1.08e-36!26;UBERON:0000990!1.08e-36!26;UBERON:0000473!3.29e-30!14;UBERON:0003135!4.64e-28!15;UBERON:0003101!3.54e-26!16;UBERON:0000079!3.54e-26!16;UBERON:0002323!3.63e-19!37;UBERON:0004458!3.63e-19!37;UBERON:0003886!1.39e-18!38;UBERON:0002553!4.96e-18!39;UBERON:0000464!2.15e-11!57;UBERON:0000992!1.34e-10!3;UBERON:0005631!1.82e-10!3;UBERON:0000478!1.82e-10!3;UBERON:0000158!1.82e-10!3;UBERON:0003134!2.86e-10!8;UBERON:0000474!4.18e-09!9;UBERON:0001987!1.42e-07!2;UBERON:0003124!1.42e-07!2;UBERON:0004340!1.42e-07!2;UBERON:0003100!2.08e-07!11;UBERON:0000466!2.15e-07!79 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000991,4.63e-53,18;UBERON:0005564,4.63e-53,18;UBERON:0000473,7.08e-48,14;UBERON:0004176,2.14e-47,17;UBERON:0009196,2.14e-47,17;UBERON:0009117,2.14e-47,17;UBERON:0003135,1.23e-44,15;UBERON:0003101,8.37e-42,16;UBERON:0000079,8.37e-42,16;UBERON:0003133,1.39e-39,24;UBERON:0005156,1.80e-36,26;UBERON:0000990,1.80e-36,26;UBERON:0002323,2.39e-25,37;UBERON:0004458,2.39e-25,37;UBERON:0003886,1.18e-24,38;UBERON:0002553,5.37e-24,39;UBERON:0000926,5.46e-07,120;UBERON:0004120,5.46e-07,120;UBERON:0006603,5.46e-07,120 | |||
|phase1_expression=0,0,0,0.30246421130683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.38121212422995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.186399445825301,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19420560091096,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0.228497025219458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.712262414669021,1.30309567482861,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0.847328283455281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.6560164057889,1.64468200648377,2.48187735685646,2.91676782516071,0.904118764344118,3.04121025883401,1.05621514781179,2.3436789271911,8.49360689848258,16.4277202161684,8.64090018773596,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@Tex12 | |||
}} |
Revision as of 06:50, 5 August 2015
Short description: | p3@Tex12 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Tex12_5end |
Coexpression cluster: | MCL_coexpression_mm9:70 |
Association with transcript: | -52bp_to_ENSMUST00000034568, NM_025687, uc009pjs.1, uc009pjt.1_5end |
EntrezGene: | 66654 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gonad | 4.63e-53 | 18 |
gonad primordium | 4.63e-53 | 18 |
testis | 7.08e-48 | 14 |
external genitalia | 2.14e-47 | 17 |
indifferent external genitalia | 2.14e-47 | 17 |
indifferent gonad | 2.14e-47 | 17 |
male reproductive organ | 1.23e-44 | 15 |
male organism | 8.37e-42 | 16 |
male reproductive system | 8.37e-42 | 16 |
reproductive organ | 1.39e-39 | 24 |
reproductive structure | 1.80e-36 | 26 |
reproductive system | 1.80e-36 | 26 |
body cavity | 2.39e-25 | 37 |
body cavity or lining | 2.39e-25 | 37 |
body cavity precursor | 1.18e-24 | 38 |
anatomical cavity | 5.37e-24 | 39 |
mesoderm | 5.46e-07 | 120 |
mesoderm-derived structure | 5.46e-07 | 120 |
presumptive mesoderm | 5.46e-07 | 120 |