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FFCP PHASE1:Mm9::chr4:154620969..154620981,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=NA
|EntrezGene=NA
|HGNC=
|HGNC=
|MCL_coexpression_id=205
|MCL_coexpression_id=205
|TSSclassifier=NA
|UniProt=NA
|UniProt=NA
|association_with_transcript=NA
|association_with_transcript=NA
|cluster_id=chr4:154620969..154620981,+
|description=CAGE_peak_at_chr4:154620969..154620981,+
|description=CAGE_peak_at_chr4:154620969..154620981,+
|id=chr4:154620969..154620981,+
|id=chr4:154620969..154620981,+
|ontology_enrichment_celltype=CL:0002453!1.70e-08!8
|ontology_enrichment_celltype=CL:0002453!1.70e-08!8
|ontology_enrichment_celltype_v019_2=CL:0002453,8.38e-24,8;CL:0000333,9.36e-19,10;CL:0000095,9.36e-19,10;CL:0000243,9.36e-19,10;CL:0000123,9.36e-19,10;CL:0000125,9.36e-19,10;CL:0000030,9.36e-19,10;CL:0000339,9.36e-19,10;CL:0000128,4.05e-18,6;CL:0000126,4.05e-18,6;CL:0000127,4.05e-18,6;CL:0002605,2.46e-07,2;CL:0002604,2.46e-07,2;CL:0000878,2.81e-07,2;CL:0000129,2.81e-07,2;CL:0002603,5.86e-07,2
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!3.41e-12!52;UBERON:0005068!3.41e-12!52;UBERON:0006241!3.41e-12!52;UBERON:0007135!3.41e-12!52;UBERON:0000955!3.62e-12!50;UBERON:0006238!3.62e-12!50;UBERON:0001017!5.39e-12!73;UBERON:0005743!5.39e-12!73;UBERON:0002616!1.74e-11!49;UBERON:0000073!3.27e-11!75;UBERON:0001016!3.27e-11!75;UBERON:0002020!3.60e-11!34;UBERON:0002791!6.32e-11!29;UBERON:0003528!6.32e-11!29;UBERON:0001893!6.32e-11!29;UBERON:0000956!1.02e-10!21;UBERON:0001869!1.02e-10!21;UBERON:0000203!1.02e-10!21;UBERON:0002619!1.76e-10!17;UBERON:0003080!3.56e-10!40;UBERON:0002780!4.68e-10!39;UBERON:0001890!4.68e-10!39;UBERON:0006240!4.68e-10!39;UBERON:0000033!9.46e-09!63;UBERON:0002346!2.57e-08!71;UBERON:0003075!2.57e-08!71;UBERON:0007284!2.57e-08!71;UBERON:0000025!3.89e-08!114;UBERON:0004111!1.66e-07!122;UBERON:0003056!2.87e-07!49;UBERON:0002021!3.63e-07!10;UBERON:0000411!3.63e-07!10;UBERON:0001950!3.63e-07!10;UBERON:0004121!4.83e-07!102;UBERON:0000924!4.83e-07!102;UBERON:0006601!4.83e-07!102
|ontology_enrichment_uberon=UBERON:0001049!3.41e-12!52;UBERON:0005068!3.41e-12!52;UBERON:0006241!3.41e-12!52;UBERON:0007135!3.41e-12!52;UBERON:0000955!3.62e-12!50;UBERON:0006238!3.62e-12!50;UBERON:0001017!5.39e-12!73;UBERON:0005743!5.39e-12!73;UBERON:0002616!1.74e-11!49;UBERON:0000073!3.27e-11!75;UBERON:0001016!3.27e-11!75;UBERON:0002020!3.60e-11!34;UBERON:0002791!6.32e-11!29;UBERON:0003528!6.32e-11!29;UBERON:0001893!6.32e-11!29;UBERON:0000956!1.02e-10!21;UBERON:0001869!1.02e-10!21;UBERON:0000203!1.02e-10!21;UBERON:0002619!1.76e-10!17;UBERON:0003080!3.56e-10!40;UBERON:0002780!4.68e-10!39;UBERON:0001890!4.68e-10!39;UBERON:0006240!4.68e-10!39;UBERON:0000033!9.46e-09!63;UBERON:0002346!2.57e-08!71;UBERON:0003075!2.57e-08!71;UBERON:0007284!2.57e-08!71;UBERON:0000025!3.89e-08!114;UBERON:0004111!1.66e-07!122;UBERON:0003056!2.87e-07!49;UBERON:0002021!3.63e-07!10;UBERON:0000411!3.63e-07!10;UBERON:0001950!3.63e-07!10;UBERON:0004121!4.83e-07!102;UBERON:0000924!4.83e-07!102;UBERON:0006601!4.83e-07!102
|ontology_enrichment_uberon_v019_2=UBERON:0002619,1.38e-21,17;UBERON:0002021,6.38e-21,10;UBERON:0000411,6.38e-21,10;UBERON:0001950,6.38e-21,10;UBERON:0000956,4.75e-20,21;UBERON:0001869,4.75e-20,21;UBERON:0000203,4.75e-20,21;UBERON:0001017,3.14e-19,73;UBERON:0001016,1.42e-18,75;UBERON:0003528,1.44e-18,29;UBERON:0002791,1.44e-18,29;UBERON:0001893,1.44e-18,29;UBERON:0000955,1.19e-17,47;UBERON:0006238,1.19e-17,47;UBERON:0002020,1.68e-17,34;UBERON:0000073,2.62e-16,54;UBERON:0002616,5.38e-16,46;UBERON:0001049,2.36e-15,52;UBERON:0005068,2.36e-15,52;UBERON:0006241,2.36e-15,52;UBERON:0007135,2.36e-15,52;UBERON:0002780,5.93e-15,39;UBERON:0001890,5.93e-15,39;UBERON:0006240,5.93e-15,39;UBERON:0003080,1.72e-14,40;UBERON:0004121,1.57e-13,95;UBERON:0000924,1.57e-13,95;UBERON:0006601,1.57e-13,95;UBERON:0002346,1.10e-11,64;UBERON:0003075,1.10e-11,64;UBERON:0007284,1.10e-11,64;UBERON:0003056,3.48e-11,49;UBERON:0010371,9.87e-10,73;UBERON:0010314,8.10e-08,92
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.12956537739216,10.4652075062614,32.9529274101708,47.4408953741251,6.57936181639204,11.5002051491977,0,0,0,0,0,1.54701627683233,0.202316460859598,0,0,0.677689064138264,1.77858959222228,0.449949858640699,0,0,22.7696083993988,36.1165207002261,0.207379224616955,0,0.210324961351382,0.285650984403804,1.10434270475807,0.122490799214954,0.0958454710182364,0.919218786610021,0,1.0214987046815,0.153606533256243,0.131886287730194,0,0,0.558365998002762,0,0.763991238884051,0,0.854230084794618,0,0,0,0,0,0,0,0,0,0.280888840263504,0.340860645156116,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0,0.230615497256059,0,0.352766121407114,0,0,0.722996784599558,0,0.161766849947409,0,0.484875253135222,0,0,0,0,0.11981512450592,0,0,0.149790639404823,7.77751024791665,1.00523481690292,2.25971616249959,2.55715457330331,0.83115217823824,2.59586020908412,0.916554274652847,0.373220911830279,0.758168275301024,0,0,0,0,0,0.0680364991513279,0.12811372028485,0,0,0,0,0.175951124163949,0,0,1.0447564995665,1.23469281844766,0.995171334092466,0.702213187313235,0,0,0.414251545071004,0.469052119962192,0.180062061461015,0.23674473558521,0,0.308534225774757,0,0,0.116765342367169,0,0,0.162137619091711,0,0.219550115291051,0.402619256281115,2.10289948564127,0.411618449517138,0,0,0,0.232236671860439,0.257734922644187,0,0,0,0,0.164698954724011,0,0,0.38992817423824,0,0,0.398282546508734,0.189667900953082,0.114248512609729,0,0.203651327845314,0,0.0701358198903186,0.0632365371242573,0.147610147979602,0,0,0,0,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.189491411770485,0,0.169745085775188,0.234690248288502,0.167506257441816,0.476087281772027,0.390267295715598,0.315270288212382,0.221464689648775,0,0.163863314715738,0,0,0,0,0,0,0.481651769963376,0.234423373184406,0,0,0,0,0.215423397732799,0,0,0,0,0,0,3.53453448063988,0.141940085208269,1.42452482933804,0.488660878060728,0.164970122972535,0,0.242780636154981,0,0,0,0.614870295887855,0,0,0.356497378384721,0,0,0,0,0,0,0,0.177340233642274,0,0.329098041204242,0.304464949114599,0,0,0,0,0,0.120625849856312,0.119372344003136,0,0,0.370850604021019,0,0.206386867963223,0.185194527369712,0,0,0,0.679913719975421,1.39951452323658,1.10559979043539,0,0,0,0.216010681643603,0,0,0.269728692769641,0.165306911450672,0,0,0,0,0.448549638131936,0.165458490457098,0,0.129159823477731,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,3.95326289831947,2.76195141904306,1.14579102687879,2.749650917499,1.37016503954128,3.0215755895588,0,2.70192721934532,1.81256963593682,1.55328093525546,0,0,0,0,0,0,0.222246727801615,0.206035057238894,0,0,0.25347929989024,0,0.187283014939765,0.0640251524048693,0.229741875822453,0,0.231768651889711,0.192909220463705,0.412085900803307,0,0.342869252385415,0,0,0.436039249896986,0.188218760830661,0.0846146078916765,0,0,0,0,0.237270036248348,0.0985044823755635,0.818462086339379,0,0.192906610981141,0,0.233931608445408,0,0.382576664137687,0.661774257358546,0.695603506861264
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.12956537739216,10.4652075062614,32.9529274101708,47.4408953741251,6.57936181639204,11.5002051491977,0,0,0,0,0,1.54701627683233,0.202316460859598,0,0,0.677689064138264,1.77858959222228,0.449949858640699,0,0,22.7696083993988,36.1165207002261,0.207379224616955,0,0.210324961351382,0.285650984403804,1.10434270475807,0.122490799214954,0.0958454710182364,0.919218786610021,0,1.0214987046815,0.153606533256243,0.131886287730194,0,0,0.558365998002762,0,0.763991238884051,0,0.854230084794618,0,0,0,0,0,0,0,0,0,0.280888840263504,0.340860645156116,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0,0.230615497256059,0,0.352766121407114,0,0,0.722996784599558,0,0.161766849947409,0,0.484875253135222,0,0,0,0,0.11981512450592,0,0,0.149790639404823,7.77751024791665,1.00523481690292,2.25971616249959,2.55715457330331,0.83115217823824,2.59586020908412,0.916554274652847,0.373220911830279,0.758168275301024,0,0,0,0,0,0.0680364991513279,0.12811372028485,0,0,0,0,0.175951124163949,0,0,1.0447564995665,1.23469281844766,0.995171334092466,0.702213187313235,0,0,0.414251545071004,0.469052119962192,0.180062061461015,0.23674473558521,0,0.308534225774757,0,0,0.116765342367169,0,0,0.162137619091711,0,0.219550115291051,0.402619256281115,2.10289948564127,0.411618449517138,0,0,0,0.232236671860439,0.257734922644187,0,0,0,0,0.164698954724011,0,0,0.38992817423824,0,0,0.398282546508734,0.189667900953082,0.114248512609729,0,0.203651327845314,0,0.0701358198903186,0.0632365371242573,0.147610147979602,0,0,0,0,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.189491411770485,0,0.169745085775188,0.234690248288502,0.167506257441816,0.476087281772027,0.390267295715598,0.315270288212382,0.221464689648775,0,0.163863314715738,0,0,0,0,0,0,0.481651769963376,0.234423373184406,0,0,0,0,0.215423397732799,0,0,0,0,0,0,3.53453448063988,0.141940085208269,1.42452482933804,0.488660878060728,0.164970122972535,0,0.242780636154981,0,0,0,0.614870295887855,0,0,0.356497378384721,0,0,0,0,0,0,0,0.177340233642274,0,0.329098041204242,0.304464949114599,0,0,0,0,0,0.120625849856312,0.119372344003136,0,0,0.370850604021019,0,0.206386867963223,0.185194527369712,0,0,0,0.679913719975421,1.39951452323658,1.10559979043539,0,0,0,0.216010681643603,0,0,0.269728692769641,0.165306911450672,0,0,0,0,0.448549638131936,0.165458490457098,0,0.129159823477731,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,3.95326289831947,2.76195141904306,1.14579102687879,2.749650917499,1.37016503954128,3.0215755895588,0,2.70192721934532,1.81256963593682,1.55328093525546,0,0,0,0,0,0,0.222246727801615,0.206035057238894,0,0,0.25347929989024,0,0.187283014939765,0.0640251524048693,0.229741875822453,0,0.231768651889711,0.192909220463705,0.412085900803307,0,0.342869252385415,0,0,0.436039249896986,0.188218760830661,0.0846146078916765,0,0,0,0,0.237270036248348,0.0985044823755635,0.818462086339379,0,0.192906610981141,0,0.233931608445408,0,0.382576664137687,0.661774257358546,0.695603506861264
|short_description=p@chr4:154620969..154620981,+
|short_description=p@chr4:154620969..154620981,+
}}
}}

Latest revision as of 07:01, 5 August 2015

Short description:p@chr4:154620969..154620981, +
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chr4:154620969..154620981, +
Coexpression cluster:MCL_coexpression_mm9:205
Association with transcript: NA
EntrezGene:NA
Link to Zenbu:ZENBU


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CAGE Expression

Sample

p@chr4:154620969..154620981+

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.17
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.13
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C210.47
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B832.95
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C347.44
Mouse Astrocytes, donor2.CNhs12078.11552-120C46.58
Mouse Astrocytes, donor3.CNhs12107.11633-122C411.50
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.55
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C822.77
Mouse Microglia, donor2.CNhs12634.11736-123E836.12
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.10
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.02
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.76
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.85
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.72
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.15
corpus striatum, adult.CNhs10487.19-21D87.78
corpus striatum, neonate N00.CNhs11226.630-43F11.01
cortex, adult.CNhs10473.12-14D52.26
cortex, neonate N30.CNhs11107.1392-42F22.56
diencephalon, adult.CNhs10482.20-12F20.83
diencephalon, neonate N30.CNhs11201.1388-42B22.60
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.92
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.37
epididymis, adult.CNhs10490.58-23B20.76
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.07
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.00
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B51.23
gonad, embryo E13.CNhs11044.1564-45I61.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.40
hippocampus, adult.CNhs10478.13-16E82.10
hippocampus, neonate N00.CNhs11228.627-43G10.41
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.48
medulla oblongata, neonate N30.CNhs11200.1396-42A30.23
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I93.53
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H71.42
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.37
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.68
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.40
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.11
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.95
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.76
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.75
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.02
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.70
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.81
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.55
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.06
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.08
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.10
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.00
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.00
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.70





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of cerebral cortex1.38e-2117
occipital lobe6.38e-2110
visual cortex6.38e-2110
neocortex6.38e-2110
cerebral cortex4.75e-2021
cerebral hemisphere4.75e-2021
pallium4.75e-2021
central nervous system3.14e-1973
nervous system1.42e-1875
brain grey matter1.44e-1829
regional part of telencephalon1.44e-1829
telencephalon1.44e-1829
brain1.19e-1747
future brain1.19e-1747
gray matter1.68e-1734
regional part of nervous system2.62e-1654
regional part of brain5.38e-1646
neural tube2.36e-1552
neural rod2.36e-1552
future spinal cord2.36e-1552
neural keel2.36e-1552
regional part of forebrain5.93e-1539
forebrain5.93e-1539
future forebrain5.93e-1539
anterior neural tube1.72e-1440
ectoderm-derived structure1.57e-1395
ectoderm1.57e-1395
presumptive ectoderm1.57e-1395
neurectoderm1.10e-1164
neural plate1.10e-1164
presumptive neural plate1.10e-1164
pre-chordal neural plate3.48e-1149
ecto-epithelium9.87e-1073
structure with developmental contribution from neural crest8.10e-0892
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