FFCP PHASE1:Mm9::chr1:174127882..174127895,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=176 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:174127882..174127895,- | |||
|description=CAGE_peak_at_chr1:174127882..174127895,- | |description=CAGE_peak_at_chr1:174127882..174127895,- | ||
|id=chr1:174127882..174127895,- | |id=chr1:174127882..174127895,- | ||
|ontology_enrichment_celltype=CL:0000055!6.51e-15!50;CL:0000221!2.54e-14!44;CL:0000133!2.54e-14!44;CL:0002319!8.47e-14!43;CL:0000117!4.13e-11!23;CL:0000337!4.13e-11!23;CL:0000393!7.43e-10!39;CL:0000211!7.43e-10!39;CL:0002321!7.01e-09!70;CL:0000220!7.01e-09!70;CL:0000540!2.84e-08!33;CL:0000047!2.84e-08!33;CL:0000031!2.84e-08!33;CL:0000404!2.84e-08!33;CL:0000333!2.27e-07!10;CL:0000095!2.27e-07!10;CL:0000243!2.27e-07!10;CL:0000123!2.27e-07!10;CL:0000125!2.27e-07!10;CL:0000030!2.27e-07!10;CL:0000339!2.27e-07!10 | |ontology_enrichment_celltype=CL:0000055!6.51e-15!50;CL:0000221!2.54e-14!44;CL:0000133!2.54e-14!44;CL:0002319!8.47e-14!43;CL:0000117!4.13e-11!23;CL:0000337!4.13e-11!23;CL:0000393!7.43e-10!39;CL:0000211!7.43e-10!39;CL:0002321!7.01e-09!70;CL:0000220!7.01e-09!70;CL:0000540!2.84e-08!33;CL:0000047!2.84e-08!33;CL:0000031!2.84e-08!33;CL:0000404!2.84e-08!33;CL:0000333!2.27e-07!10;CL:0000095!2.27e-07!10;CL:0000243!2.27e-07!10;CL:0000123!2.27e-07!10;CL:0000125!2.27e-07!10;CL:0000030!2.27e-07!10;CL:0000339!2.27e-07!10 | ||
|ontology_enrichment_celltype_v019_2=CL:0002453,2.63e-24,8;CL:0002194,5.93e-22,4;CL:0000766,5.93e-22,4;CL:0000234,5.93e-22,4;CL:0000576,5.93e-22,4;CL:0000235,5.93e-22,4;CL:0000864,5.93e-22,4;CL:0002009,5.93e-22,4;CL:0000040,5.93e-22,4;CL:0000559,5.93e-22,4;CL:0000333,2.23e-19,10;CL:0000095,2.23e-19,10;CL:0000243,2.23e-19,10;CL:0000123,2.23e-19,10;CL:0000125,2.23e-19,10;CL:0000030,2.23e-19,10;CL:0000339,2.23e-19,10;CL:0002614,3.53e-16,3;CL:0002319,5.53e-16,43;CL:0000221,1.39e-15,44;CL:0000133,1.39e-15,44;CL:0000128,9.28e-15,6;CL:0000126,9.28e-15,6;CL:0000127,9.28e-15,6;CL:0000473,1.19e-12,7;CL:0000557,1.19e-12,7;CL:0000878,3.84e-12,2;CL:0000129,3.84e-12,2;CL:0002605,5.57e-12,2;CL:0002604,5.57e-12,2;CL:0002476,1.67e-11,2;CL:0002321,3.70e-09,70;CL:0000117,1.51e-07,23;CL:0000337,1.51e-07,23;CL:0000219,6.20e-07,54;CL:0000839,7.04e-07,13 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.55e-21!75;UBERON:0001016!1.55e-21!75;UBERON:0001017!1.54e-20!73;UBERON:0005743!1.54e-20!73;UBERON:0002020!8.57e-19!34;UBERON:0004121!2.10e-18!102;UBERON:0000924!2.10e-18!102;UBERON:0006601!2.10e-18!102;UBERON:0001049!1.23e-17!52;UBERON:0005068!1.23e-17!52;UBERON:0006241!1.23e-17!52;UBERON:0007135!1.23e-17!52;UBERON:0000955!2.18e-16!50;UBERON:0006238!2.18e-16!50;UBERON:0000033!5.70e-16!63;UBERON:0002616!8.03e-16!49;UBERON:0002791!2.35e-15!29;UBERON:0003528!2.35e-15!29;UBERON:0001893!2.35e-15!29;UBERON:0002346!8.51e-15!71;UBERON:0003075!8.51e-15!71;UBERON:0007284!8.51e-15!71;UBERON:0002780!2.43e-14!39;UBERON:0001890!2.43e-14!39;UBERON:0006240!2.43e-14!39;UBERON:0003080!1.11e-13!40;UBERON:0003056!3.65e-13!49;UBERON:0000956!1.00e-11!21;UBERON:0001869!1.00e-11!21;UBERON:0000203!1.00e-11!21;UBERON:0002619!1.53e-09!17;UBERON:0007811!1.55e-09!86;UBERON:0000153!3.46e-09!94;UBERON:0000025!2.11e-07!114;UBERON:0004111!6.97e-07!122 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002038,3.53e-16,3;UBERON:0009663,3.53e-16,3;UBERON:0009661,3.53e-16,3;UBERON:0000125,3.53e-16,3;UBERON:0002308,3.53e-16,3;UBERON:0002950,2.78e-12,4;UBERON:0001891,2.78e-12,4;UBERON:0009616,2.78e-12,4;UBERON:0010286,2.78e-12,4;UBERON:0001017,2.54e-10,73;UBERON:0001016,5.38e-10,75;UBERON:0002371,2.82e-08,16;UBERON:0004121,1.74e-07,95;UBERON:0000924,1.74e-07,95;UBERON:0006601,1.74e-07,95;UBERON:0002020,7.56e-07,34 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0.234064526321993,0,0,0,0,0,0,0,0.157731082679119,0,0,0.255129870453209,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.101376931219515,0.367093504323363,0,7.41285531693518,3.51497892375155,5.8328969722285,0.839918529752175,1.43752564364972,0.167782606057736,0,0,0.257259436035947,0.573066879877513,0,0.202316460859598,0,1.26766280701236,0.338844532069132,0,0.899899717281399,0,1.4209602298922,5.39280198933128,7.68436610643109,0.103689612308478,0.945041568321835,0.630974884054146,0.571301968807607,0.883474163806454,0.122490799214954,0.287536413054709,0.919218786610021,1.10115880999389,0,0.614426133024974,0.263772575460388,0.731901148819277,0,1.67509799400829,1.68828783009504,1.37518422999129,0.883885756421003,1.28134512719193,0.186399445825301,0.605809546665472,0.151143120213571,0,0,0,0,0,0,0,0,0.259786004602869,0,0.281686839553361,0,0,0,0.216491041011214,0.253359865475099,0,0,0,0.148442139064825,0,0,0.230615497256059,0,0,0.251333182659351,0,0.144599356919912,0,0,0.220841518460394,0,0,0.292780797011547,0.41889341362691,0,0,0,0.127070227073065,0,0.457500602818626,0.125654352112864,0.521472960576829,0,0.20778804455956,0.162241263067758,0,0,0,0,0,0.229902104433473,0,0.150704817835715,0.136072998302656,0.2562274405697,0.281105173679186,0,0.215567992932842,0,0,0,0,0.348252166522167,0.205782136407943,0.199034266818493,0,0,0,0,0,0.180062061461015,0,0.196764231747404,0,0,0,0.116765342367169,0,0,0,0,0,0.268412837520744,0.420579897128254,0.411618449517138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0,0,0,0,0.147610147979602,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0,2.87536413054709,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0.157635144106191,0,0,0.163863314715738,0.172684981865896,0.144649058581512,1.50791283939272,2.17562273527484,0,0.275936746304732,0,0.468846746368813,0,0,0,0,0,0,0.222798674082394,0,0.809621403349789,0,0,0.321321316421807,0,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0.214337035031592,0,0,0.164549020602121,0.304464949114599,0.23467170806371,0.21183207086382,0,0,0,0.0603129249281559,0,0,0,0,0,0,0.185194527369712,0,0.136694227721025,0,0,0,0,0,0.158167996790568,0,0,0,0,0.134864346384821,0.0826534557253359,0,0,0,0,0.149516546043979,0,0.194451188344048,0.129159823477731,0,0,0,0,0.241584120826006,0,0,0,0,0,0,0,0,0.147689527174577,0.100966449948148,0,0,0,0.0962118416403295,0,0,0,0,0.335769232728157,0,0.187682475451182,0,0,0,0,0,1.14579102687879,0.859265911718438,0.685082519770642,0.755393897389701,0.675022500231806,0.45032120322422,0.906284817968409,0.51776031175182,0.103787347584177,0,0,0,0,0.367687016900028,0,0.206035057238894,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0,0,0,0.147198920134397,0,0.354951612318675,0,0,0.0941093804153306,0.169229215783353,0,0.263069711437843,0,0.561142271657738,0,0,0,0,0,0.499621155875892,0,0,0,0,0 | |phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0.234064526321993,0,0,0,0,0,0,0,0.157731082679119,0,0,0.255129870453209,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.101376931219515,0.367093504323363,0,7.41285531693518,3.51497892375155,5.8328969722285,0.839918529752175,1.43752564364972,0.167782606057736,0,0,0.257259436035947,0.573066879877513,0,0.202316460859598,0,1.26766280701236,0.338844532069132,0,0.899899717281399,0,1.4209602298922,5.39280198933128,7.68436610643109,0.103689612308478,0.945041568321835,0.630974884054146,0.571301968807607,0.883474163806454,0.122490799214954,0.287536413054709,0.919218786610021,1.10115880999389,0,0.614426133024974,0.263772575460388,0.731901148819277,0,1.67509799400829,1.68828783009504,1.37518422999129,0.883885756421003,1.28134512719193,0.186399445825301,0.605809546665472,0.151143120213571,0,0,0,0,0,0,0,0,0.259786004602869,0,0.281686839553361,0,0,0,0.216491041011214,0.253359865475099,0,0,0,0.148442139064825,0,0,0.230615497256059,0,0,0.251333182659351,0,0.144599356919912,0,0,0.220841518460394,0,0,0.292780797011547,0.41889341362691,0,0,0,0.127070227073065,0,0.457500602818626,0.125654352112864,0.521472960576829,0,0.20778804455956,0.162241263067758,0,0,0,0,0,0.229902104433473,0,0.150704817835715,0.136072998302656,0.2562274405697,0.281105173679186,0,0.215567992932842,0,0,0,0,0.348252166522167,0.205782136407943,0.199034266818493,0,0,0,0,0,0.180062061461015,0,0.196764231747404,0,0,0,0.116765342367169,0,0,0,0,0,0.268412837520744,0.420579897128254,0.411618449517138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0,0,0,0,0.147610147979602,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0,2.87536413054709,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0.157635144106191,0,0,0.163863314715738,0.172684981865896,0.144649058581512,1.50791283939272,2.17562273527484,0,0.275936746304732,0,0.468846746368813,0,0,0,0,0,0,0.222798674082394,0,0.809621403349789,0,0,0.321321316421807,0,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0.214337035031592,0,0,0.164549020602121,0.304464949114599,0.23467170806371,0.21183207086382,0,0,0,0.0603129249281559,0,0,0,0,0,0,0.185194527369712,0,0.136694227721025,0,0,0,0,0,0.158167996790568,0,0,0,0,0.134864346384821,0.0826534557253359,0,0,0,0,0.149516546043979,0,0.194451188344048,0.129159823477731,0,0,0,0,0.241584120826006,0,0,0,0,0,0,0,0,0.147689527174577,0.100966449948148,0,0,0,0.0962118416403295,0,0,0,0,0.335769232728157,0,0.187682475451182,0,0,0,0,0,1.14579102687879,0.859265911718438,0.685082519770642,0.755393897389701,0.675022500231806,0.45032120322422,0.906284817968409,0.51776031175182,0.103787347584177,0,0,0,0,0.367687016900028,0,0.206035057238894,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0,0,0,0.147198920134397,0,0.354951612318675,0,0,0.0941093804153306,0.169229215783353,0,0.263069711437843,0,0.561142271657738,0,0,0,0,0,0.499621155875892,0,0,0,0,0 | ||
|short_description=p@chr1:174127882..174127895,- | |short_description=p@chr1:174127882..174127895,- | ||
}} | }} |
Latest revision as of 07:12, 5 August 2015
Short description: | p@chr1:174127882..174127895, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:174127882..174127895, - |
Coexpression cluster: | MCL_coexpression_mm9:176 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
substantia nigra | 3.53e-16 | 3 |
telencephalic nucleus | 3.53e-16 | 3 |
midbrain nucleus | 3.53e-16 | 3 |
neural nucleus | 3.53e-16 | 3 |
nucleus of brain | 3.53e-16 | 3 |
regional part of midbrain | 2.78e-12 | 4 |
midbrain | 2.78e-12 | 4 |
presumptive midbrain | 2.78e-12 | 4 |
midbrain neural tube | 2.78e-12 | 4 |
central nervous system | 2.54e-10 | 73 |
nervous system | 5.38e-10 | 75 |
bone marrow | 2.82e-08 | 16 |
ectoderm-derived structure | 1.74e-07 | 95 |
ectoderm | 1.74e-07 | 95 |
presumptive ectoderm | 1.74e-07 | 95 |
gray matter | 7.56e-07 | 34 |