FFCP PHASE1:Mm9::chr12:80660031..80660039,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=495 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:80660031..80660039,+ | |||
|description=CAGE_peak_at_chr12:80660031..80660039,+ | |description=CAGE_peak_at_chr12:80660031..80660039,+ | ||
|id=chr12:80660031..80660039,+ | |id=chr12:80660031..80660039,+ | ||
|ontology_enrichment_celltype=CL:0000068!2.18e-09!3;CL:0002202!2.18e-09!3;CL:0000069!2.18e-09!3;CL:0002632!2.18e-09!3;CL:0002368!2.18e-09!3;CL:0000307!2.18e-09!3;CL:0000377!2.18e-09!3;CL:0000181!3.30e-09!5;CL:0000417!3.30e-09!5;CL:0000668!3.30e-09!5;CL:0000412!3.30e-09!5;CL:0000182!3.30e-09!5 | |ontology_enrichment_celltype=CL:0000068!2.18e-09!3;CL:0002202!2.18e-09!3;CL:0000069!2.18e-09!3;CL:0002632!2.18e-09!3;CL:0002368!2.18e-09!3;CL:0000307!2.18e-09!3;CL:0000377!2.18e-09!3;CL:0000181!3.30e-09!5;CL:0000417!3.30e-09!5;CL:0000668!3.30e-09!5;CL:0000412!3.30e-09!5;CL:0000182!3.30e-09!5 | ||
|ontology_enrichment_celltype_v019_2=CL:0000068,4.54e-30,3;CL:0002202,4.54e-30,3;CL:0000069,4.54e-30,3;CL:0002632,4.54e-30,3;CL:0002368,4.54e-30,3;CL:0000307,4.54e-30,3;CL:0000377,4.54e-30,3;CL:0000182,5.91e-18,5;CL:0000223,1.69e-17,20;CL:0000066,5.21e-14,25;CL:0000057,5.74e-11,1;CL:0000632,5.74e-11,1;CL:0000213,8.99e-11,1;CL:0002078,8.99e-11,1;CL:0000115,8.99e-11,1;CL:0002262,8.99e-11,1;CL:1000398,8.99e-11,1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000077!1.71e-10!97;UBERON:0002107!1.73e-10!22;UBERON:0007499!1.73e-10!22;UBERON:0006925!1.73e-10!22;UBERON:0009497!1.73e-10!22;UBERON:0000015!1.73e-10!22;UBERON:0002423!1.73e-10!22;UBERON:0006235!1.73e-10!22;UBERON:0008835!1.73e-10!22;UBERON:0003894!1.73e-10!22;UBERON:0004161!1.73e-10!22;UBERON:0008836!1.73e-10!22;UBERON:0001041!4.25e-10!92;UBERON:0009854!6.05e-10!23;UBERON:0009856!6.05e-10!23;UBERON:0003126!2.18e-09!3;UBERON:0001005!2.18e-09!3;UBERON:0007196!2.18e-09!3;UBERON:0001558!2.18e-09!3;UBERON:0002365!5.48e-09!25;UBERON:0002330!5.48e-09!25;UBERON:0000466!5.10e-08!79;UBERON:0005177!3.75e-07!85;UBERON:0009569!7.30e-07!66;UBERON:0004921!7.76e-07!126;UBERON:0004185!7.76e-07!126 | |ontology_enrichment_uberon=UBERON:0000077!1.71e-10!97;UBERON:0002107!1.73e-10!22;UBERON:0007499!1.73e-10!22;UBERON:0006925!1.73e-10!22;UBERON:0009497!1.73e-10!22;UBERON:0000015!1.73e-10!22;UBERON:0002423!1.73e-10!22;UBERON:0006235!1.73e-10!22;UBERON:0008835!1.73e-10!22;UBERON:0003894!1.73e-10!22;UBERON:0004161!1.73e-10!22;UBERON:0008836!1.73e-10!22;UBERON:0001041!4.25e-10!92;UBERON:0009854!6.05e-10!23;UBERON:0009856!6.05e-10!23;UBERON:0003126!2.18e-09!3;UBERON:0001005!2.18e-09!3;UBERON:0007196!2.18e-09!3;UBERON:0001558!2.18e-09!3;UBERON:0002365!5.48e-09!25;UBERON:0002330!5.48e-09!25;UBERON:0000466!5.10e-08!79;UBERON:0005177!3.75e-07!85;UBERON:0009569!7.30e-07!66;UBERON:0004921!7.76e-07!126;UBERON:0004185!7.76e-07!126 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003126,4.54e-30,3;UBERON:0001005,4.54e-30,3;UBERON:0007196,4.54e-30,3;UBERON:0001558,4.54e-30,3;UBERON:0000996,1.83e-11,1;UBERON:0002394,8.99e-11,1;UBERON:0001281,8.99e-11,1;UBERON:0000353,8.99e-11,1;UBERON:0003497,8.99e-11,1;UBERON:0003909,8.99e-11,1;UBERON:0003928,8.99e-11,1;UBERON:0003835,8.99e-11,1;UBERON:0003513,8.99e-11,1;UBERON:0001280,8.99e-11,1;UBERON:0004647,8.99e-11,1;UBERON:0002294,8.99e-11,1;UBERON:0001173,8.99e-11,1;UBERON:0004912,8.99e-11,1;UBERON:0005171,8.99e-11,1;UBERON:0002100,1.67e-08,90;UBERON:0005177,1.32e-07,79;UBERON:0002107,2.22e-07,22;UBERON:0007499,2.22e-07,22;UBERON:0006925,2.22e-07,22;UBERON:0009497,2.22e-07,22;UBERON:0000015,2.22e-07,22;UBERON:0002423,2.22e-07,22;UBERON:0006235,2.22e-07,22;UBERON:0008835,2.22e-07,22;UBERON:0003894,2.22e-07,22;UBERON:0004161,2.22e-07,22;UBERON:0008836,2.22e-07,22;UBERON:0009854,4.52e-07,23;UBERON:0009856,4.52e-07,23;UBERON:0009569,4.81e-07,66 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15945795480671,1.72084775396277,6.79971333707751,1.07940638327563,0,0.448026887097336,0.140444420131752,0,0,0,0,0,0,0,6.061749148314,3.80039798212648,6.0662933401774,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0.863088412352432,0.486405680325106,0,0,0.744281895337007,0,0.252578877947112,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0.172684981865896,0.289298117163023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32745138339963,0,0,0,0,0,0.775284879504663,0.363533729477506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0,0.269728692769641,0.0826534557253359,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.2189976075068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0,0,0.0936415074698824,0.0640251524048693,0.229741875822453,0,0.115884325944855,0.192909220463705,0,0,0,0,0,0,0,0.169229215783353,0,0,0.271608227691724,0,0,0,0,0,0.192906610981141,0,0.233931608445408,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15945795480671,1.72084775396277,6.79971333707751,1.07940638327563,0,0.448026887097336,0.140444420131752,0,0,0,0,0,0,0,6.061749148314,3.80039798212648,6.0662933401774,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0.863088412352432,0.486405680325106,0,0,0.744281895337007,0,0.252578877947112,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0.172684981865896,0.289298117163023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32745138339963,0,0,0,0,0,0.775284879504663,0.363533729477506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0,0.269728692769641,0.0826534557253359,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.2189976075068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0,0,0.0936415074698824,0.0640251524048693,0.229741875822453,0,0.115884325944855,0.192909220463705,0,0,0,0,0,0,0,0.169229215783353,0,0,0.271608227691724,0,0,0,0,0,0.192906610981141,0,0.233931608445408,0,0,0,0 | ||
|short_description=p@chr12:80660031..80660039,+ | |short_description=p@chr12:80660031..80660039,+ | ||
}} | }} |
Latest revision as of 07:47, 5 August 2015
Short description: | p@chr12:80660031..80660039, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:80660031..80660039, + |
Coexpression cluster: | MCL_coexpression_mm9:495 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 4.54e-30 | 3 |
epithelial cell of tracheobronchial tree | 4.54e-30 | 3 |
branched duct epithelial cell | 4.54e-30 | 3 |
epithelial cell of lower respiratory tract | 4.54e-30 | 3 |
respiratory epithelial cell | 4.54e-30 | 3 |
tracheal epithelial cell | 4.54e-30 | 3 |
tracheoblast | 4.54e-30 | 3 |
hepatocyte | 5.91e-18 | 5 |
endodermal cell | 1.69e-17 | 20 |
epithelial cell | 5.21e-14 | 25 |
fibroblast | 5.74e-11 | 1 |
hepatic stellate cell | 5.74e-11 | 1 |
lining cell | 8.99e-11 | 1 |
meso-epithelial cell | 8.99e-11 | 1 |
endothelial cell | 8.99e-11 | 1 |
endothelial cell of sinusoid | 8.99e-11 | 1 |
endothelial cell of hepatic sinusoid | 8.99e-11 | 1 |
Ontology term | p-value | n |
---|---|---|
trachea | 4.54e-30 | 3 |
respiratory airway | 4.54e-30 | 3 |
tracheobronchial tree | 4.54e-30 | 3 |
lower respiratory tract | 4.54e-30 | 3 |
vagina | 1.83e-11 | 1 |
bile duct | 8.99e-11 | 1 |
hepatic sinusoid | 8.99e-11 | 1 |
parenchyma | 8.99e-11 | 1 |
abdomen blood vessel | 8.99e-11 | 1 |
sinusoid | 8.99e-11 | 1 |
digestive system duct | 8.99e-11 | 1 |
abdominal segment blood vessel | 8.99e-11 | 1 |
trunk blood vessel | 8.99e-11 | 1 |
liver parenchyma | 8.99e-11 | 1 |
liver lobule | 8.99e-11 | 1 |
biliary system | 8.99e-11 | 1 |
biliary tree | 8.99e-11 | 1 |
biliary bud | 8.99e-11 | 1 |
hepatic duct | 8.99e-11 | 1 |
trunk | 1.67e-08 | 90 |
trunk region element | 1.32e-07 | 79 |
liver | 2.22e-07 | 22 |
epithelial sac | 2.22e-07 | 22 |
digestive gland | 2.22e-07 | 22 |
epithelium of foregut-midgut junction | 2.22e-07 | 22 |
anatomical boundary | 2.22e-07 | 22 |
hepatobiliary system | 2.22e-07 | 22 |
foregut-midgut junction | 2.22e-07 | 22 |
hepatic diverticulum | 2.22e-07 | 22 |
liver primordium | 2.22e-07 | 22 |
septum transversum | 2.22e-07 | 22 |
liver bud | 2.22e-07 | 22 |
digestive tract diverticulum | 4.52e-07 | 23 |
sac | 4.52e-07 | 23 |
subdivision of trunk | 4.81e-07 | 66 |