FFCP PHASE1:Mm9::chr4:17563333..17563339,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=235 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:17563333..17563339,- | |||
|description=CAGE_peak_at_chr4:17563333..17563339,- | |description=CAGE_peak_at_chr4:17563333..17563339,- | ||
|id=chr4:17563333..17563339,- | |id=chr4:17563333..17563339,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002021!1.41e-18!10;UBERON:0000411!1.41e-18!10;UBERON:0001950!1.41e-18!10;UBERON:0000956!4.77e-17!21;UBERON:0001869!4.77e-17!21;UBERON:0000203!4.77e-17!21;UBERON:0002619!1.26e-15!17;UBERON:0002780!1.21e-14!39;UBERON:0001890!1.21e-14!39;UBERON:0006240!1.21e-14!39;UBERON:0003080!2.92e-14!40;UBERON:0002791!3.10e-12!29;UBERON:0003528!3.10e-12!29;UBERON:0001893!3.10e-12!29;UBERON:0002616!1.67e-11!49;UBERON:0003056!1.67e-11!49;UBERON:0000955!2.94e-11!50;UBERON:0006238!2.94e-11!50;UBERON:0001049!8.53e-11!52;UBERON:0005068!8.53e-11!52;UBERON:0006241!8.53e-11!52;UBERON:0007135!8.53e-11!52;UBERON:0002020!2.27e-10!34;UBERON:0001851!6.23e-09!1;UBERON:0005889!6.23e-09!1;UBERON:0000470!6.23e-09!1;UBERON:0000033!9.07e-09!63;UBERON:0002346!1.10e-07!71;UBERON:0003075!1.10e-07!71;UBERON:0007284!1.10e-07!71;UBERON:0001017!1.89e-07!73;UBERON:0005743!1.89e-07!73;UBERON:0000073!3.15e-07!75;UBERON:0001016!3.15e-07!75 | |ontology_enrichment_uberon=UBERON:0002021!1.41e-18!10;UBERON:0000411!1.41e-18!10;UBERON:0001950!1.41e-18!10;UBERON:0000956!4.77e-17!21;UBERON:0001869!4.77e-17!21;UBERON:0000203!4.77e-17!21;UBERON:0002619!1.26e-15!17;UBERON:0002780!1.21e-14!39;UBERON:0001890!1.21e-14!39;UBERON:0006240!1.21e-14!39;UBERON:0003080!2.92e-14!40;UBERON:0002791!3.10e-12!29;UBERON:0003528!3.10e-12!29;UBERON:0001893!3.10e-12!29;UBERON:0002616!1.67e-11!49;UBERON:0003056!1.67e-11!49;UBERON:0000955!2.94e-11!50;UBERON:0006238!2.94e-11!50;UBERON:0001049!8.53e-11!52;UBERON:0005068!8.53e-11!52;UBERON:0006241!8.53e-11!52;UBERON:0007135!8.53e-11!52;UBERON:0002020!2.27e-10!34;UBERON:0001851!6.23e-09!1;UBERON:0005889!6.23e-09!1;UBERON:0000470!6.23e-09!1;UBERON:0000033!9.07e-09!63;UBERON:0002346!1.10e-07!71;UBERON:0003075!1.10e-07!71;UBERON:0007284!1.10e-07!71;UBERON:0001017!1.89e-07!73;UBERON:0005743!1.89e-07!73;UBERON:0000073!3.15e-07!75;UBERON:0001016!3.15e-07!75 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000956,1.50e-21,21;UBERON:0001869,1.50e-21,21;UBERON:0000203,1.50e-21,21;UBERON:0002021,3.17e-20,10;UBERON:0000411,3.17e-20,10;UBERON:0001950,3.17e-20,10;UBERON:0002619,1.25e-18,17;UBERON:0003528,1.07e-15,29;UBERON:0002791,1.07e-15,29;UBERON:0001893,1.07e-15,29;UBERON:0001851,6.50e-14,1;UBERON:0005889,6.50e-14,1;UBERON:0002020,1.99e-13,34;UBERON:0002780,9.76e-12,39;UBERON:0001890,9.76e-12,39;UBERON:0006240,9.76e-12,39;UBERON:0003080,1.90e-11,40;UBERON:0002616,5.57e-10,46;UBERON:0000955,9.01e-10,47;UBERON:0006238,9.01e-10,47;UBERON:0003056,2.22e-09,49;UBERON:0001049,7.58e-09,52;UBERON:0005068,7.58e-09,52;UBERON:0006241,7.58e-09,52;UBERON:0007135,7.58e-09,52;UBERON:0000073,1.59e-08,54;UBERON:0002346,3.29e-07,64;UBERON:0003075,3.29e-07,64;UBERON:0007284,3.29e-07,64 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.73824320192276,1.79000820131231,0.20778804455956,0.486723789203273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.78521907415429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.920650473014354,1.14579102687879,0,0,0,1.35004500046361,1.35096360967266,1.81256963593682,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.73824320192276,1.79000820131231,0.20778804455956,0.486723789203273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.78521907415429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.920650473014354,1.14579102687879,0,0,0,1.35004500046361,1.35096360967266,1.81256963593682,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr4:17563333..17563339,- | |short_description=p@chr4:17563333..17563339,- | ||
}} | }} |
Latest revision as of 08:09, 5 August 2015
Short description: | p@chr4:17563333..17563339, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:17563333..17563339, - |
Coexpression cluster: | MCL_coexpression_mm9:235 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebral cortex | 1.50e-21 | 21 |
cerebral hemisphere | 1.50e-21 | 21 |
pallium | 1.50e-21 | 21 |
occipital lobe | 3.17e-20 | 10 |
visual cortex | 3.17e-20 | 10 |
neocortex | 3.17e-20 | 10 |
regional part of cerebral cortex | 1.25e-18 | 17 |
brain grey matter | 1.07e-15 | 29 |
regional part of telencephalon | 1.07e-15 | 29 |
telencephalon | 1.07e-15 | 29 |
cortex | 6.50e-14 | 1 |
zygote cortex | 6.50e-14 | 1 |
gray matter | 1.99e-13 | 34 |
regional part of forebrain | 9.76e-12 | 39 |
forebrain | 9.76e-12 | 39 |
future forebrain | 9.76e-12 | 39 |
anterior neural tube | 1.90e-11 | 40 |
regional part of brain | 5.57e-10 | 46 |
brain | 9.01e-10 | 47 |
future brain | 9.01e-10 | 47 |
pre-chordal neural plate | 2.22e-09 | 49 |
neural tube | 7.58e-09 | 52 |
neural rod | 7.58e-09 | 52 |
future spinal cord | 7.58e-09 | 52 |
neural keel | 7.58e-09 | 52 |
regional part of nervous system | 1.59e-08 | 54 |
neurectoderm | 3.29e-07 | 64 |
neural plate | 3.29e-07 | 64 |
presumptive neural plate | 3.29e-07 | 64 |